RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 PPM1LQ5SGD2 360 aa16.94■□□□□ 0.3
COL1A1-211ENST00000507689 VARS2Q5ST30 1063 aaKnown RBP16.94■□□□□ 0.3
COL1A1-211ENST00000507689 SPATA1Q5VX52 437 aa16.94■□□□□ 0.3
COL1A1-211ENST00000507689 SPATA31D4Q6ZUB0 917 aa16.94■□□□□ 0.3
COL1A1-211ENST00000507689 CCDC149Q6ZUS6 474 aa16.94■□□□□ 0.3
COL1A1-211ENST00000507689 GPR149Q86SP6 731 aa16.94■□□□□ 0.3
COL1A1-211ENST00000507689 C3orf58Q8NDZ4 430 aa16.94■□□□□ 0.3
COL1A1-211ENST00000507689 CMASQ8NFW8 434 aaPredicted RBP16.94■□□□□ 0.3
COL1A1-211ENST00000507689 GOLGA5Q8TBA6 731 aa16.94■□□□□ 0.3
COL1A1-211ENST00000507689 HPS3Q969F9 1004 aa16.94■□□□□ 0.3
COL1A1-211ENST00000507689 ACSF2Q96CM8 615 aaPredicted RBP16.94■□□□□ 0.3
COL1A1-211ENST00000507689 SAAL1Q96ER3 474 aa16.94■□□□□ 0.3
COL1A1-211ENST00000507689 OXCT2Q9BYC2 517 aaPredicted RBP16.94■□□□□ 0.3
COL1A1-211ENST00000507689 PCIF1Q9H4Z3 704 aa16.94■□□□□ 0.3
COL1A1-211ENST00000507689 GDPD2Q9HCC8 539 aa16.94■□□□□ 0.3
COL1A1-211ENST00000507689 SLC39A2Q9NP94 309 aa16.94■□□□□ 0.3
COL1A1-211ENST00000507689 ZDHHC7Q9NXF8 308 aa16.94■□□□□ 0.3
COL1A1-211ENST00000507689 MTRRQ9UBK8 725 aa16.94■□□□□ 0.3
COL1A1-211ENST00000507689 PCDHB8Q9UN66 801 aa16.94■□□□□ 0.3
COL1A1-211ENST00000507689 CDY1Q9Y6F8 540 aa16.94■□□□□ 0.3
COL1A1-211ENST00000507689 BRWD1Q9NSI6 2320 aa16.94■□□□□ 0.3
COL1A1-211ENST00000507689 C19orf67A6NJJ6 358 aa16.93■□□□□ 0.3
COL1A1-211ENST00000507689 ZNF233A6NK53 670 aa16.93■□□□□ 0.3
COL1A1-211ENST00000507689 ACTN4O43707 911 aaKnown RBP16.93■□□□□ 0.3
COL1A1-211ENST00000507689 XYLBO75191 536 aa16.93■□□□□ 0.3
COL1A1-211ENST00000507689 ADRB2P07550 413 aa16.93■□□□□ 0.3
COL1A1-211ENST00000507689 NFICP08651 508 aa16.93■□□□□ 0.3
COL1A1-211ENST00000507689 ODC1P11926 461 aa16.93■□□□□ 0.3
COL1A1-211ENST00000507689 ADSSP30520 456 aa16.93■□□□□ 0.3
COL1A1-211ENST00000507689 ARPP19P56211 112 aa16.93■□□□□ 0.3
COL1A1-211ENST00000507689 TFAMQ00059 246 aaKnown RBP16.93■□□□□ 0.3
COL1A1-211ENST00000507689 ZBTB6Q15916 424 aa16.93■□□□□ 0.3
COL1A1-211ENST00000507689 METTL23Q86XA0 190 aa16.93■□□□□ 0.3
COL1A1-211ENST00000507689 NELFCDQ8IXH7 590 aa16.93■□□□□ 0.3
COL1A1-211ENST00000507689 GRAMD1CQ8IYS0 662 aa16.93■□□□□ 0.3
COL1A1-211ENST00000507689 TDRD5Q8NAT2 981 aaKnown RBP16.93■□□□□ 0.3
COL1A1-211ENST00000507689 ZNF507Q8TCN5 953 aa16.93■□□□□ 0.3
COL1A1-211ENST00000507689 SMG7Q92540 1137 aaKnown RBP16.93■□□□□ 0.3
COL1A1-211ENST00000507689 ZNF560Q96MR9 790 aa16.93■□□□□ 0.3
COL1A1-211ENST00000507689 CLSTN3Q9BQT9 956 aa16.93■□□□□ 0.3
COL1A1-211ENST00000507689 DPP3Q9NY33 737 aa16.93■□□□□ 0.3
COL1A1-211ENST00000507689 CIZ1Q9ULV3 898 aaPredicted RBP16.93■□□□□ 0.3
COL1A1-211ENST00000507689 HPSEQ9Y251 543 aa16.93■□□□□ 0.3
COL1A1-211ENST00000507689 GOLGA8IPA6NC78 632 aa16.92■□□□□ 0.3
COL1A1-211ENST00000507689 GOLGA8JA6NMD2 632 aa16.92■□□□□ 0.3
COL1A1-211ENST00000507689 HNRNPA1P09651 372 aaKnown RBP eCLIP16.92■□□□□ 0.3
COL1A1-211ENST00000507689 WEE2P0C1S8 567 aa16.92■□□□□ 0.3
COL1A1-211ENST00000507689 TMEM191BP0C7N4 346 aa16.92■□□□□ 0.3
COL1A1-211ENST00000507689 CASP1P29466 404 aa16.92■□□□□ 0.3
COL1A1-211ENST00000507689 PNPLA4P41247 253 aa16.92■□□□□ 0.3
COL1A1-211ENST00000507689 YWHAHQ04917 246 aaPredicted RBP16.92■□□□□ 0.3
COL1A1-211ENST00000507689 RAB33AQ14088 237 aa16.92■□□□□ 0.3
COL1A1-211ENST00000507689 RTL10Q7L3V2 364 aa16.92■□□□□ 0.3
COL1A1-211ENST00000507689 OTOP3Q7RTS5 596 aa16.92■□□□□ 0.3
COL1A1-211ENST00000507689 BRSK2Q8IWQ3 736 aa16.92■□□□□ 0.3
COL1A1-211ENST00000507689 PLCD3Q8N3E9 789 aa16.92■□□□□ 0.3
COL1A1-211ENST00000507689 ANKRD36BP1Q96IX9 119 aa16.92■□□□□ 0.3
COL1A1-211ENST00000507689 CHAMP1Q96JM3 812 aa16.92■□□□□ 0.3
COL1A1-211ENST00000507689 CBWD1Q9BRT8 395 aa16.92■□□□□ 0.3
COL1A1-211ENST00000507689 FGFBP2Q9BYJ0 223 aa16.92■□□□□ 0.3
COL1A1-211ENST00000507689 DSEQ9UL01 958 aa16.92■□□□□ 0.3
COL1A1-211ENST00000507689 POLIQ9UNA4 740 aa16.92■□□□□ 0.3
COL1A1-211ENST00000507689 REV3LO60673 3130 aa16.92■□□□□ 0.3
COL1A1-211ENST00000507689 PRRG1O14668 218 aa16.91■□□□□ 0.3
COL1A1-211ENST00000507689 MEFVO15553 781 aaPredicted RBP16.91■□□□□ 0.3
COL1A1-211ENST00000507689 DCXO43602 365 aa16.91■□□□□ 0.3
COL1A1-211ENST00000507689 ZMYND10O75800 440 aa16.91■□□□□ 0.3
COL1A1-211ENST00000507689 ZNF202O95125 648 aa16.91■□□□□ 0.3
COL1A1-211ENST00000507689 TNNC2P02585 160 aa16.91■□□□□ 0.3
COL1A1-211ENST00000507689 RPN1P04843 607 aaKnown RBP16.91■□□□□ 0.3
COL1A1-211ENST00000507689 C8AP07357 584 aa16.91■□□□□ 0.3
COL1A1-211ENST00000507689 CPB1P15086 417 aa16.91■□□□□ 0.3
COL1A1-211ENST00000507689 SP100P23497 879 aaPredicted RBP16.91■□□□□ 0.3
COL1A1-211ENST00000507689 TAF6P49848 677 aa16.91■□□□□ 0.3
COL1A1-211ENST00000507689 KNOP1Q1ED39 458 aaKnown RBP16.91■□□□□ 0.3
COL1A1-211ENST00000507689 UVSSAQ2YD98 709 aa16.91■□□□□ 0.3
COL1A1-211ENST00000507689 SV2CQ496J9 727 aa16.91■□□□□ 0.3
COL1A1-211ENST00000507689 KMT5BQ4FZB7 885 aa16.91■□□□□ 0.3
COL1A1-211ENST00000507689 C9orf57Q5W0N0 161 aa16.91■□□□□ 0.3
COL1A1-211ENST00000507689 KRBA2Q6ZNG9 492 aa16.91■□□□□ 0.3
COL1A1-211ENST00000507689 RNF135Q8IUD6 432 aa16.91■□□□□ 0.3
COL1A1-211ENST00000507689 FNBP1Q96RU3 617 aa16.91■□□□□ 0.3
COL1A1-211ENST00000507689 IKZF4Q9H2S9 585 aa16.91■□□□□ 0.3
COL1A1-211ENST00000507689 POMKQ9H5K3 350 aa16.91■□□□□ 0.3
COL1A1-211ENST00000507689 HSPBP1Q9NZL4 362 aa16.91■□□□□ 0.3
COL1A1-211ENST00000507689 FBXW11Q9UKB1 542 aa16.91■□□□□ 0.3
COL1A1-211ENST00000507689 FAM237AA0A1B0GTK4 181 aa16.9■□□□□ 0.3
COL1A1-211ENST00000507689 LOC730098B7Z3J9 87 aa16.9■□□□□ 0.3
COL1A1-211ENST00000507689 PRPF40AO75400 957 aaKnown RBP16.9■□□□□ 0.3
COL1A1-211ENST00000507689 KRT19P08727 400 aa16.9■□□□□ 0.3
COL1A1-211ENST00000507689 CYP2J2P51589 502 aa16.9■□□□□ 0.3
COL1A1-211ENST00000507689 GUCY2FP51841 1108 aa16.9■□□□□ 0.3
COL1A1-211ENST00000507689 LILRA4P59901 499 aa16.9■□□□□ 0.3
COL1A1-211ENST00000507689 TPGS2Q68CL5 300 aa16.9■□□□□ 0.3
COL1A1-211ENST00000507689 LILRA6Q6PI73 481 aa16.9■□□□□ 0.3
COL1A1-211ENST00000507689 CD300LGQ6UXG3 332 aa16.9■□□□□ 0.3
COL1A1-211ENST00000507689 CRELD2Q6UXH1 353 aaPredicted RBP16.9■□□□□ 0.3
COL1A1-211ENST00000507689 EPM2AIP1Q7L775 607 aaPredicted RBP16.9■□□□□ 0.3
COL1A1-211ENST00000507689 THEM5Q8N1Q8 247 aa16.9■□□□□ 0.3
COL1A1-211ENST00000507689 ELMOD1Q8N336 334 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms