RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 NRDE2Q9H7Z3 1164 aa15.29■□□□□ 0.04
RNF4-208ENST00000507247 SIX2Q9NPC8 291 aa15.29■□□□□ 0.04
RNF4-208ENST00000507247 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.29■□□□□ 0.04
RNF4-208ENST00000507247 RAB20Q9NX57 234 aa15.29■□□□□ 0.04
RNF4-208ENST00000507247 DNAJB4Q9UDY4 337 aa15.29■□□□□ 0.04
RNF4-208ENST00000507247 AGAP1Q9UPQ3 857 aa15.29■□□□□ 0.04
RNF4-208ENST00000507247 TRIOBPQ9H2D6 2365 aa15.29■□□□□ 0.04
RNF4-208ENST00000507247 A0A1W2PQC6 194 aa15.28■□□□□ 0.04
RNF4-208ENST00000507247 PIRO00625 290 aa15.28■□□□□ 0.04
RNF4-208ENST00000507247 ATP2A2P16615 1042 aaKnown RBP15.28■□□□□ 0.04
RNF4-208ENST00000507247 CLCNKBP51801 687 aa15.28■□□□□ 0.04
RNF4-208ENST00000507247 HTRA4P83105 476 aaPredicted RBP15.28■□□□□ 0.04
RNF4-208ENST00000507247 RNASELQ05823 741 aaKnown RBP15.28■□□□□ 0.04
RNF4-208ENST00000507247 TRPC3Q13507 836 aa15.28■□□□□ 0.04
RNF4-208ENST00000507247 SPOPLQ6IQ16 392 aa15.28■□□□□ 0.04
RNF4-208ENST00000507247 TRIM65Q6PJ69 517 aa15.28■□□□□ 0.04
RNF4-208ENST00000507247 HERC6Q8IVU3 1022 aa15.28■□□□□ 0.04
RNF4-208ENST00000507247 CMTR2Q8IYT2 770 aaKnown RBP15.28■□□□□ 0.04
RNF4-208ENST00000507247 LRRC43Q8N309 656 aa15.28■□□□□ 0.04
RNF4-208ENST00000507247 PHOSPHO2Q8TCD6 241 aa15.28■□□□□ 0.04
RNF4-208ENST00000507247 MRFAP1L1Q96HT8 127 aa15.28■□□□□ 0.04
RNF4-208ENST00000507247 RNPC3Q96LT9 517 aaKnown RBP15.28■□□□□ 0.04
RNF4-208ENST00000507247 LSM14BQ9BX40 385 aaKnown RBP15.28■□□□□ 0.04
RNF4-208ENST00000507247 MRPL9Q9BYD2 267 aaKnown RBP15.28■□□□□ 0.04
RNF4-208ENST00000507247 UBE2OQ9C0C9 1292 aaKnown RBP15.28■□□□□ 0.04
RNF4-208ENST00000507247 CWH43Q9H720 699 aa15.28■□□□□ 0.04
RNF4-208ENST00000507247 APOBEC3GQ9HC16 384 aaKnown RBP15.28■□□□□ 0.04
RNF4-208ENST00000507247 NLRC5Q86WI3 1866 aa15.28■□□□□ 0.04
RNF4-208ENST00000507247 SZT2Q5T011 3432 aa15.27■□□□□ 0.04
RNF4-208ENST00000507247 PODXLO00592 558 aa15.27■□□□□ 0.04
RNF4-208ENST00000507247 EPHB6O15197 1021 aa15.27■□□□□ 0.04
RNF4-208ENST00000507247 ASS1P00966 412 aaKnown RBP15.27■□□□□ 0.04
RNF4-208ENST00000507247 TPM3P06753 285 aa15.27■□□□□ 0.04
RNF4-208ENST00000507247 NOP14P78316 857 aaKnown RBP15.27■□□□□ 0.04
RNF4-208ENST00000507247 RBP5P82980 135 aa15.27■□□□□ 0.04
RNF4-208ENST00000507247 CETN1Q12798 172 aa15.27■□□□□ 0.04
RNF4-208ENST00000507247 LRMPQ12912 555 aa15.27■□□□□ 0.04
RNF4-208ENST00000507247 UPP1Q16831 310 aa15.27■□□□□ 0.04
RNF4-208ENST00000507247 VSTM4Q8IW00 320 aa15.27■□□□□ 0.04
RNF4-208ENST00000507247 ARHGEF19Q8IW93 802 aa15.27■□□□□ 0.04
RNF4-208ENST00000507247 C3orf58Q8NDZ4 430 aa15.27■□□□□ 0.04
RNF4-208ENST00000507247 RSPH1Q8WYR4 309 aa15.27■□□□□ 0.04
RNF4-208ENST00000507247 TATDN2Q93075 761 aa15.27■□□□□ 0.04
RNF4-208ENST00000507247 FAM193BQ96PV7 902 aaPredicted RBP15.27■□□□□ 0.04
RNF4-208ENST00000507247 YME1L1Q96TA2 773 aa15.27■□□□□ 0.04
RNF4-208ENST00000507247 GANQ9H2C0 597 aa15.27■□□□□ 0.04
RNF4-208ENST00000507247 RANBP2P49792 3224 aaKnown RBP15.27■□□□□ 0.03
RNF4-208ENST00000507247 TSC2P49815 1807 aa15.27■□□□□ 0.03
RNF4-208ENST00000507247 F8W810 466 aa15.26■□□□□ 0.03
RNF4-208ENST00000507247 SPTLC1O15269 473 aa15.26■□□□□ 0.03
RNF4-208ENST00000507247 ZC3H11AO75152 810 aaKnown RBP eCLIP15.26■□□□□ 0.03
RNF4-208ENST00000507247 NOL4O94818 638 aa15.26■□□□□ 0.03
RNF4-208ENST00000507247 RPL9P32969 192 aaKnown RBP15.26■□□□□ 0.03
RNF4-208ENST00000507247 SLC11A1P49279 550 aa15.26■□□□□ 0.03
RNF4-208ENST00000507247 BTG3Q14201 252 aaPredicted RBP15.26■□□□□ 0.03
RNF4-208ENST00000507247 ZNF699Q32M78 642 aa15.26■□□□□ 0.03
RNF4-208ENST00000507247 FAM109BQ6ICB4 259 aaPredicted RBP15.26■□□□□ 0.03
RNF4-208ENST00000507247 GJB7Q6PEY0 223 aa15.26■□□□□ 0.03
RNF4-208ENST00000507247 CD300LGQ6UXG3 332 aa15.26■□□□□ 0.03
RNF4-208ENST00000507247 LRRC52Q8N7C0 313 aa15.26■□□□□ 0.03
RNF4-208ENST00000507247 PCMTD1Q96MG8 357 aaPredicted RBP15.26■□□□□ 0.03
RNF4-208ENST00000507247 UROC1Q96N76 676 aa15.26■□□□□ 0.03
RNF4-208ENST00000507247 ZBED2Q9BTP6 218 aa15.26■□□□□ 0.03
RNF4-208ENST00000507247 FAM207AQ9NSI2 230 aaPredicted RBP15.26■□□□□ 0.03
RNF4-208ENST00000507247 AJAP1Q9UKB5 411 aaPredicted RBP15.26■□□□□ 0.03
RNF4-208ENST00000507247 NUB1Q9Y5A7 615 aa15.26■□□□□ 0.03
RNF4-208ENST00000507247 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.26■□□□□ 0.03
RNF4-208ENST00000507247 MRPL42Q9Y6G3 142 aaKnown RBP15.26■□□□□ 0.03
RNF4-208ENST00000507247 ITIH6Q6UXX5 1313 aa15.25■□□□□ 0.03
RNF4-208ENST00000507247 LCHNA4D1U4 455 aa15.25■□□□□ 0.03
RNF4-208ENST00000507247 GRXCR1A8MXD5 290 aa15.25■□□□□ 0.03
RNF4-208ENST00000507247 SOX1O00570 391 aaPredicted RBP15.25■□□□□ 0.03
RNF4-208ENST00000507247 KIF4AO95239 1232 aa15.25■□□□□ 0.03
RNF4-208ENST00000507247 STAU1O95793 577 aaKnown RBP15.25■□□□□ 0.03
RNF4-208ENST00000507247 ITGB1P05556 798 aa15.25■□□□□ 0.03
RNF4-208ENST00000507247 ATICP31939 592 aa15.25■□□□□ 0.03
RNF4-208ENST00000507247 PBX3P40426 434 aa15.25■□□□□ 0.03
RNF4-208ENST00000507247 OR1G1P47890 313 aa15.25■□□□□ 0.03
RNF4-208ENST00000507247 RABGGTBP53611 331 aa15.25■□□□□ 0.03
RNF4-208ENST00000507247 SGSM1Q2NKQ1 1148 aa15.25■□□□□ 0.03
RNF4-208ENST00000507247 KLHDC7AQ5VTJ3 777 aa15.25■□□□□ 0.03
RNF4-208ENST00000507247 PHLDB3Q6NSJ2 640 aa15.25■□□□□ 0.03
RNF4-208ENST00000507247 TMC6Q7Z403 805 aa15.25■□□□□ 0.03
RNF4-208ENST00000507247 DDX27Q96GQ7 796 aaKnown RBP15.25■□□□□ 0.03
RNF4-208ENST00000507247 HPDLQ96IR7 371 aa15.25■□□□□ 0.03
RNF4-208ENST00000507247 ZNF560Q96MR9 790 aa15.25■□□□□ 0.03
RNF4-208ENST00000507247 NT5C1BQ96P26 610 aa15.25■□□□□ 0.03
RNF4-208ENST00000507247 TMEM175Q9BSA9 504 aa15.25■□□□□ 0.03
RNF4-208ENST00000507247 VRTNQ9H8Y1 702 aa15.25■□□□□ 0.03
RNF4-208ENST00000507247 PLCB1Q9NQ66 1216 aa15.25■□□□□ 0.03
RNF4-208ENST00000507247 POLIQ9UNA4 740 aa15.25■□□□□ 0.03
RNF4-208ENST00000507247 PRG3Q9Y2Y8 225 aaPredicted RBP15.25■□□□□ 0.03
RNF4-208ENST00000507247 FHOD1Q9Y613 1164 aa15.25■□□□□ 0.03
RNF4-208ENST00000507247 VWA8A3KMH1 1905 aa15.25■□□□□ 0.03
RNF4-208ENST00000507247 NRP1O14786 923 aa15.24■□□□□ 0.03
RNF4-208ENST00000507247 TLL1O43897 1013 aa15.24■□□□□ 0.03
RNF4-208ENST00000507247 GALTP07902 379 aa15.24■□□□□ 0.03
RNF4-208ENST00000507247 LINC00271P0C7V0 271 aa15.24■□□□□ 0.03
RNF4-208ENST00000507247 CDC25BP30305 580 aa15.24■□□□□ 0.03
RNF4-208ENST00000507247 BMP8BP34820 402 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms