RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 GSTA3Q16772 222 aa18.13■□□□□ 0.49
SQSTM1-211ENST00000506690 ANKS1BQ7Z6G8 1248 aa18.13■□□□□ 0.49
SQSTM1-211ENST00000506690 CCNJLQ8IV13 435 aa18.13■□□□□ 0.49
SQSTM1-211ENST00000506690 C4orf33Q8N1A6 199 aa18.13■□□□□ 0.49
SQSTM1-211ENST00000506690 RDH13Q8NBN7 331 aa18.13■□□□□ 0.49
SQSTM1-211ENST00000506690 SLC5A5Q92911 643 aa18.13■□□□□ 0.49
SQSTM1-211ENST00000506690 SYNCQ9H7C4 482 aa18.13■□□□□ 0.49
SQSTM1-211ENST00000506690 NPHS2Q9NP85 383 aa18.13■□□□□ 0.49
SQSTM1-211ENST00000506690 DMAP1Q9NPF5 467 aaPredicted RBP18.13■□□□□ 0.49
SQSTM1-211ENST00000506690 BCS1LQ9Y276 419 aa18.13■□□□□ 0.49
SQSTM1-211ENST00000506690 PPP3CAQ08209 521 aa18.13■□□□□ 0.49
SQSTM1-211ENST00000506690 CETN1Q12798 172 aa18.13■□□□□ 0.49
SQSTM1-211ENST00000506690 FYB2Q5VWT5 728 aa18.13■□□□□ 0.49
SQSTM1-211ENST00000506690 CEP128Q6ZU80 1094 aa18.13■□□□□ 0.49
SQSTM1-211ENST00000506690 STXBP4Q6ZWJ1 553 aa18.13■□□□□ 0.49
SQSTM1-211ENST00000506690 SLC47A2Q86VL8 602 aa18.13■□□□□ 0.49
SQSTM1-211ENST00000506690 FAM178BQ8IXR5 827 aa18.13■□□□□ 0.49
SQSTM1-211ENST00000506690 FAM163AQ96GL9 167 aaPredicted RBP18.13■□□□□ 0.49
SQSTM1-211ENST00000506690 HSD17B14Q9BPX1 270 aa18.13■□□□□ 0.49
SQSTM1-211ENST00000506690 TUBB6Q9BUF5 446 aa18.13■□□□□ 0.49
SQSTM1-211ENST00000506690 ACP6Q9NPH0 428 aa18.13■□□□□ 0.49
SQSTM1-211ENST00000506690 METTL5Q9NRN9 209 aaKnown RBP18.13■□□□□ 0.49
SQSTM1-211ENST00000506690 SRP68Q9UHB9 627 aaKnown RBP18.13■□□□□ 0.49
SQSTM1-211ENST00000506690 TRPC5Q9UL62 973 aaPredicted RBP18.13■□□□□ 0.49
SQSTM1-211ENST00000506690 RPS6KA4O75676 772 aa18.12■□□□□ 0.49
SQSTM1-211ENST00000506690 KLF1Q13351 362 aaPredicted RBP18.12■□□□□ 0.49
SQSTM1-211ENST00000506690 MYBPC2Q14324 1141 aa18.12■□□□□ 0.49
SQSTM1-211ENST00000506690 RASA3Q14644 834 aa18.12■□□□□ 0.49
SQSTM1-211ENST00000506690 SLC51AQ86UW1 340 aa18.12■□□□□ 0.49
SQSTM1-211ENST00000506690 DTNBP1Q96EV8 351 aa18.12■□□□□ 0.49
SQSTM1-211ENST00000506690 NYXQ9GZU5 481 aa18.12■□□□□ 0.49
SQSTM1-211ENST00000506690 KRT82Q9NSB4 513 aa18.12■□□□□ 0.49
SQSTM1-211ENST00000506690 ARL8BQ9NVJ2 186 aa18.12■□□□□ 0.49
SQSTM1-211ENST00000506690 DDX43Q9NXZ2 648 aaKnown RBP18.12■□□□□ 0.49
SQSTM1-211ENST00000506690 ZNF212Q9UDV6 495 aa18.12■□□□□ 0.49
SQSTM1-211ENST00000506690 ATRNL1Q5VV63 1379 aa18.12■□□□□ 0.49
SQSTM1-211ENST00000506690 ONECUT3O60422 494 aaPredicted RBP18.12■□□□□ 0.49
SQSTM1-211ENST00000506690 KRT15P19012 456 aa18.12■□□□□ 0.49
SQSTM1-211ENST00000506690 ADSSP30520 456 aa18.12■□□□□ 0.49
SQSTM1-211ENST00000506690 RC3H1Q5TC82 1133 aaKnown RBP18.12■□□□□ 0.49
SQSTM1-211ENST00000506690 HHATQ5VTY9 493 aa18.12■□□□□ 0.49
SQSTM1-211ENST00000506690 ZNF365Q70YC5 407 aa18.12■□□□□ 0.49
SQSTM1-211ENST00000506690 PPFIBP2Q8ND30 876 aa18.12■□□□□ 0.49
SQSTM1-211ENST00000506690 FAM81AQ8TBF8 368 aa18.12■□□□□ 0.49
SQSTM1-211ENST00000506690 NR1H4Q96RI1 486 aaPredicted RBP18.12■□□□□ 0.49
SQSTM1-211ENST00000506690 ZNF184Q99676 751 aaPredicted RBP18.12■□□□□ 0.49
SQSTM1-211ENST00000506690 MMADHCQ9H3L0 296 aaPredicted RBP18.12■□□□□ 0.49
SQSTM1-211ENST00000506690 ANKFY1Q9P2R3 1169 aa18.12■□□□□ 0.49
SQSTM1-211ENST00000506690 F5H6K3 240 aa18.11■□□□□ 0.49
SQSTM1-211ENST00000506690 PDLIM1O00151 329 aa18.11■□□□□ 0.49
SQSTM1-211ENST00000506690 CYP26A1O43174 497 aa18.11■□□□□ 0.49
SQSTM1-211ENST00000506690 KLRC2P26717 231 aa18.11■□□□□ 0.49
SQSTM1-211ENST00000506690 GSTT1P30711 240 aa18.11■□□□□ 0.49
SQSTM1-211ENST00000506690 CIITAP33076 1130 aa18.11■□□□□ 0.49
SQSTM1-211ENST00000506690 SREBF1P36956 1147 aa18.11■□□□□ 0.49
SQSTM1-211ENST00000506690 PSMC4P43686 418 aa18.11■□□□□ 0.49
SQSTM1-211ENST00000506690 KBTBD2Q8IY47 623 aa18.11■□□□□ 0.49
SQSTM1-211ENST00000506690 WDR60Q8WVS4 1066 aa18.11■□□□□ 0.49
SQSTM1-211ENST00000506690 NCSTNQ92542 709 aa18.11■□□□□ 0.49
SQSTM1-211ENST00000506690 TTC25Q96NG3 672 aa18.11■□□□□ 0.49
SQSTM1-211ENST00000506690 GBP5Q96PP8 586 aa18.11■□□□□ 0.49
SQSTM1-211ENST00000506690 NARFQ9UHQ1 456 aa18.11■□□□□ 0.49
SQSTM1-211ENST00000506690 GAKO14976 1311 aa18.11■□□□□ 0.49
SQSTM1-211ENST00000506690 MYH11P35749 1972 aa18.11■□□□□ 0.49
SQSTM1-211ENST00000506690 POC1B-GALNT4F8VUJ3 575 aa18.11■□□□□ 0.49
SQSTM1-211ENST00000506690 MAP3K7O43318 606 aa18.11■□□□□ 0.49
SQSTM1-211ENST00000506690 PYGLP06737 847 aa18.11■□□□□ 0.49
SQSTM1-211ENST00000506690 ADRA2BP18089 450 aa18.11■□□□□ 0.49
SQSTM1-211ENST00000506690 SERPINB4P48594 390 aa18.11■□□□□ 0.49
SQSTM1-211ENST00000506690 CCNG2Q16589 344 aa18.11■□□□□ 0.49
SQSTM1-211ENST00000506690 MAPK6Q16659 721 aa18.11■□□□□ 0.49
SQSTM1-211ENST00000506690 SYDE2Q5VT97 1194 aa18.11■□□□□ 0.49
SQSTM1-211ENST00000506690 PCNX4Q63HM2 1172 aa18.11■□□□□ 0.49
SQSTM1-211ENST00000506690 LVRNQ6Q4G3 990 aa18.11■□□□□ 0.49
SQSTM1-211ENST00000506690 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.11■□□□□ 0.49
SQSTM1-211ENST00000506690 KREMEN1Q96MU8 473 aa18.11■□□□□ 0.49
SQSTM1-211ENST00000506690 STRA6Q9BX79 667 aa18.11■□□□□ 0.49
SQSTM1-211ENST00000506690 GYG2O15488 501 aa18.1■□□□□ 0.49
SQSTM1-211ENST00000506690 HAUS5O94927 633 aa18.1■□□□□ 0.49
SQSTM1-211ENST00000506690 SLITRK3O94933 977 aa18.1■□□□□ 0.49
SQSTM1-211ENST00000506690 TROVE2P10155 538 aaKnown RBP eCLIP18.1■□□□□ 0.49
SQSTM1-211ENST00000506690 GCLMP48507 274 aa18.1■□□□□ 0.49
SQSTM1-211ENST00000506690 VAMP7P51809 220 aa18.1■□□□□ 0.49
SQSTM1-211ENST00000506690 RASA2Q15283 850 aa18.1■□□□□ 0.49
SQSTM1-211ENST00000506690 CCDC142Q17RM4 750 aa18.1■□□□□ 0.49
SQSTM1-211ENST00000506690 ZC3H12AQ5D1E8 599 aaKnown RBP18.1■□□□□ 0.49
SQSTM1-211ENST00000506690 C1orf220Q5T0J3 134 aa18.1■□□□□ 0.49
SQSTM1-211ENST00000506690 ZNF276Q8N554 614 aa18.1■□□□□ 0.49
SQSTM1-211ENST00000506690 RFWD2Q8NHY2 731 aa18.1■□□□□ 0.49
SQSTM1-211ENST00000506690 DDX27Q96GQ7 796 aaKnown RBP18.1■□□□□ 0.49
SQSTM1-211ENST00000506690 NSL1Q96IY1 281 aa18.1■□□□□ 0.49
SQSTM1-211ENST00000506690 SETDB2Q96T68 719 aa18.1■□□□□ 0.49
SQSTM1-211ENST00000506690 TUFT1Q9NNX1 390 aa18.1■□□□□ 0.49
SQSTM1-211ENST00000506690 SSU72Q9NP77 194 aaKnown RBP18.1■□□□□ 0.49
SQSTM1-211ENST00000506690 SAYSD1Q9NPB0 183 aa18.1■□□□□ 0.49
SQSTM1-211ENST00000506690 ZBTB39O15060 712 aa18.1■□□□□ 0.49
SQSTM1-211ENST00000506690 WDR72Q3MJ13 1102 aa18.1■□□□□ 0.49
SQSTM1-211ENST00000506690 CERKLQ49MI3 558 aaPredicted RBP18.1■□□□□ 0.49
SQSTM1-211ENST00000506690 ARHGAP18Q8N392 663 aa18.1■□□□□ 0.49
SQSTM1-211ENST00000506690 CCDC24Q8N4L8 307 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms