RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 MMP1P03956 469 aa5.44□□□□□ -1.54
CDH9-203ENST00000505045 DARSP14868 501 aaKnown RBP5.44□□□□□ -1.54
CDH9-203ENST00000505045 SFNP31947 248 aa5.44□□□□□ -1.54
CDH9-203ENST00000505045 KRT2P35908 639 aa5.44□□□□□ -1.54
CDH9-203ENST00000505045 BMPR1AP36894 532 aa5.44□□□□□ -1.54
CDH9-203ENST00000505045 CRYBB1P53674 252 aaPredicted RBP5.44□□□□□ -1.54
CDH9-203ENST00000505045 HYAL1Q12794 435 aa5.44□□□□□ -1.54
CDH9-203ENST00000505045 PPP2R5CQ13362 524 aa5.44□□□□□ -1.54
CDH9-203ENST00000505045 CTTNQ14247 550 aaKnown RBP5.44□□□□□ -1.54
CDH9-203ENST00000505045 CLUL1Q15846 466 aa5.44□□□□□ -1.54
CDH9-203ENST00000505045 CLLU1OSQ5K130 101 aa5.44□□□□□ -1.54
CDH9-203ENST00000505045 GALNT17Q6IS24 598 aa5.44□□□□□ -1.54
CDH9-203ENST00000505045 CPLX2Q6PUV4 134 aaKnown RBP5.44□□□□□ -1.54
CDH9-203ENST00000505045 LRRC55Q6ZSA7 311 aa5.44□□□□□ -1.54
CDH9-203ENST00000505045 CCDC83Q8IWF9 413 aa5.44□□□□□ -1.54
CDH9-203ENST00000505045 DIS3L2Q8IYB7 885 aaKnown RBP5.44□□□□□ -1.54
CDH9-203ENST00000505045 CMTR2Q8IYT2 770 aaKnown RBP5.44□□□□□ -1.54
CDH9-203ENST00000505045 NME8Q8N427 588 aa5.44□□□□□ -1.54
CDH9-203ENST00000505045 LXNQ9BS40 222 aa5.44□□□□□ -1.54
CDH9-203ENST00000505045 FTHL17Q9BXU8 183 aa5.44□□□□□ -1.54
CDH9-203ENST00000505045 TMEM60Q9H2L4 133 aa5.44□□□□□ -1.54
CDH9-203ENST00000505045 MINDY3Q9H8M7 445 aa5.44□□□□□ -1.54
CDH9-203ENST00000505045 RGS18Q9NS28 235 aa5.44□□□□□ -1.54
CDH9-203ENST00000505045 PLAGL2Q9UPG8 496 aa5.44□□□□□ -1.54
CDH9-203ENST00000505045 CEP131Q9UPN4 1083 aa5.44□□□□□ -1.54
CDH9-203ENST00000505045 ZNF318Q5VUA4 2279 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 C2orf16Q68DN1 1984 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 FRYLO94915 3013 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 A0A087WWV3 80 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 A0A087WZ62 844 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 TBKBP1A7MCY6 615 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 KRTAP9-7A8MTY7 169 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 KIAA1324LA8MWY0 1029 aaPredicted RBP5.43□□□□□ -1.54
CDH9-203ENST00000505045 NDUFB5O43674 189 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 RPLP2P05387 115 aaKnown RBP5.43□□□□□ -1.54
CDH9-203ENST00000505045 EIF4BP23588 611 aaKnown RBP5.43□□□□□ -1.54
CDH9-203ENST00000505045 ORC1Q13415 861 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 LONRF3Q496Y0 759 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 TIGD5Q53EQ6 642 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 XKR3Q5GH77 459 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 NCAPH2Q6IBW4 605 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 PPP4R3AQ6IN85 833 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 SLC24A5Q71RS6 500 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 TMEM173Q86WV6 379 aaPredicted RBP5.43□□□□□ -1.54
CDH9-203ENST00000505045 RHPN2Q8IUC4 686 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 VN1R2Q8NFZ6 395 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 RDM1Q8NG50 284 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 FEZF2Q8TBJ5 459 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 SPPL3Q8TCT6 385 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 NEK9Q8TD19 979 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 TNPO1Q92973 898 aaKnown RBP5.43□□□□□ -1.54
CDH9-203ENST00000505045 LPPQ93052 612 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 TMEM143Q96AN5 459 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 DYDC2Q96IM9 177 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 NLRP4Q96MN2 994 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 SAMD11Q96NU1 681 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 MAP7D2Q96T17 732 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 ARID3AQ99856 593 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 FDXACB1Q9BRP7 624 aaPredicted RBP5.43□□□□□ -1.54
CDH9-203ENST00000505045 C11orf84Q9BUA3 381 aaPredicted RBP5.43□□□□□ -1.54
CDH9-203ENST00000505045 C22orf23Q9BZE7 217 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 NSUN3Q9H649 340 aaKnown RBP5.43□□□□□ -1.54
CDH9-203ENST00000505045 CWH43Q9H720 699 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 LIN7BQ9HAP6 207 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 IFT122Q9HBG6 1241 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 XPNPEP1Q9NQW7 623 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 CYP26B1Q9NR63 512 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 CLDND1Q9NY35 253 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 COG5Q9UP83 839 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 ZDBF2Q9HCK1 2354 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 TECTAO75443 2155 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 TRIP11Q15643 1979 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 CFAP54Q96N23 3096 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 PLXNA3P51805 1871 aa5.43□□□□□ -1.54
CDH9-203ENST00000505045 MAGEB2O15479 319 aa5.42□□□□□ -1.54
CDH9-203ENST00000505045 CPNE3O75131 537 aaKnown RBP5.42□□□□□ -1.54
CDH9-203ENST00000505045 MAFO75444 373 aaPredicted RBP5.42□□□□□ -1.54
CDH9-203ENST00000505045 CTSBP07858 339 aa5.42□□□□□ -1.54
CDH9-203ENST00000505045 GCFC2P16383 781 aaKnown RBP5.42□□□□□ -1.54
CDH9-203ENST00000505045 ITPKAP23677 461 aa5.42□□□□□ -1.54
CDH9-203ENST00000505045 QARSP47897 775 aaKnown RBP5.42□□□□□ -1.54
CDH9-203ENST00000505045 PSMC5P62195 406 aa5.42□□□□□ -1.54
CDH9-203ENST00000505045 PCDH1Q08174 1060 aa5.42□□□□□ -1.54
CDH9-203ENST00000505045 ANKRD1Q15327 319 aa5.42□□□□□ -1.54
CDH9-203ENST00000505045 PTPROQ16827 1216 aa5.42□□□□□ -1.54
CDH9-203ENST00000505045 LEXMQ3ZCV2 418 aa5.42□□□□□ -1.54
CDH9-203ENST00000505045 EP400NLQ6ZTU2 488 aa5.42□□□□□ -1.54
CDH9-203ENST00000505045 ECHDC2Q86YB7 292 aa5.42□□□□□ -1.54
CDH9-203ENST00000505045 FAM177A1Q8N128 213 aaPredicted RBP5.42□□□□□ -1.54
CDH9-203ENST00000505045 RNF169Q8NCN4 708 aa5.42□□□□□ -1.54
CDH9-203ENST00000505045 POF1BQ8WVV4 589 aa5.42□□□□□ -1.54
CDH9-203ENST00000505045 PABPC5Q96DU9 382 aaKnown RBP5.42□□□□□ -1.54
CDH9-203ENST00000505045 SCLT1Q96NL6 688 aa5.42□□□□□ -1.54
CDH9-203ENST00000505045 CASD1Q96PB1 797 aa5.42□□□□□ -1.54
CDH9-203ENST00000505045 CLEC4MQ9H2X3 399 aaPredicted RBP5.42□□□□□ -1.54
CDH9-203ENST00000505045 EPHX3Q9H6B9 360 aa5.42□□□□□ -1.54
CDH9-203ENST00000505045 DHX33Q9H6R0 707 aaKnown RBP5.42□□□□□ -1.54
CDH9-203ENST00000505045 TYW1Q9NV66 732 aaKnown RBP5.42□□□□□ -1.54
CDH9-203ENST00000505045 TMEM161AQ9NX61 479 aa5.42□□□□□ -1.54
CDH9-203ENST00000505045 CDH22Q9UJ99 828 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms