RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 TSGA10IPQ3SY00 556 aa6.67□□□□□ -1.34
GYPB-204ENST00000504951 MTERF2Q49AM1 385 aa6.67□□□□□ -1.34
GYPB-204ENST00000504951 SOWAHCQ53LP3 525 aaPredicted RBP6.67□□□□□ -1.34
GYPB-204ENST00000504951 FAM171A1Q5VUB5 890 aa6.67□□□□□ -1.34
GYPB-204ENST00000504951 LRCH2Q5VUJ6 765 aa6.67□□□□□ -1.34
GYPB-204ENST00000504951 TPGS2Q68CL5 300 aa6.67□□□□□ -1.34
GYPB-204ENST00000504951 RNF43Q68DV7 783 aa6.67□□□□□ -1.34
GYPB-204ENST00000504951 PSAPL1Q6NUJ1 521 aa6.67□□□□□ -1.34
GYPB-204ENST00000504951 PRSS55Q6UWB4 352 aaPredicted RBP6.67□□□□□ -1.34
GYPB-204ENST00000504951 VITQ6UXI7 678 aa6.67□□□□□ -1.34
GYPB-204ENST00000504951 ANKS3Q6ZW76 656 aa6.67□□□□□ -1.34
GYPB-204ENST00000504951 CEP68Q76N32 757 aa6.67□□□□□ -1.34
GYPB-204ENST00000504951 TRMT1LQ7Z2T5 733 aaKnown RBP6.67□□□□□ -1.34
GYPB-204ENST00000504951 MIER3Q7Z3K6 550 aa6.67□□□□□ -1.34
GYPB-204ENST00000504951 C11orf74Q86VG3 221 aa6.67□□□□□ -1.34
GYPB-204ENST00000504951 C4orf19Q8IY42 314 aa6.67□□□□□ -1.34
GYPB-204ENST00000504951 B3GALT6Q96L58 329 aa6.67□□□□□ -1.34
GYPB-204ENST00000504951 PRIMPOLQ96LW4 560 aa6.67□□□□□ -1.34
GYPB-204ENST00000504951 ZFP42Q96MM3 310 aa6.67□□□□□ -1.34
GYPB-204ENST00000504951 SCNM1Q9BWG6 230 aa6.67□□□□□ -1.34
GYPB-204ENST00000504951 APOL6Q9BWW8 343 aa6.67□□□□□ -1.34
GYPB-204ENST00000504951 EIF2AQ9BY44 585 aaKnown RBP6.67□□□□□ -1.34
GYPB-204ENST00000504951 ANO2Q9NQ90 1003 aa6.67□□□□□ -1.34
GYPB-204ENST00000504951 HCFC1R1Q9NWW0 138 aa6.67□□□□□ -1.34
GYPB-204ENST00000504951 STK17AQ9UEE5 414 aa6.67□□□□□ -1.34
GYPB-204ENST00000504951 EBF1Q9UH73 591 aa6.67□□□□□ -1.34
GYPB-204ENST00000504951 NDRG2Q9UN36 371 aaKnown RBP6.67□□□□□ -1.34
GYPB-204ENST00000504951 WDFY3Q8IZQ1 3526 aa6.67□□□□□ -1.34
GYPB-204ENST00000504951 SDK1Q7Z5N4 2213 aa6.66□□□□□ -1.34
GYPB-204ENST00000504951 TDRD15B5MCY1 1934 aaKnown RBP6.66□□□□□ -1.34
GYPB-204ENST00000504951 DSPP15924 2871 aaKnown RBP6.66□□□□□ -1.34
GYPB-204ENST00000504951 CCDC196A0A1B0GTZ2 297 aa6.66□□□□□ -1.34
GYPB-204ENST00000504951 BCLAF3A2AJT9 711 aaKnown RBP6.66□□□□□ -1.34
GYPB-204ENST00000504951 DDX11L8A8MPP1 907 aa6.66□□□□□ -1.34
GYPB-204ENST00000504951 ZBTB43O43298 467 aa6.66□□□□□ -1.34
GYPB-204ENST00000504951 PRPF3O43395 683 aaKnown RBP6.66□□□□□ -1.34
GYPB-204ENST00000504951 TRAPPC3O43617 180 aa6.66□□□□□ -1.34
GYPB-204ENST00000504951 ATG13O75143 517 aa6.66□□□□□ -1.34
GYPB-204ENST00000504951 MOSPD3O75425 235 aa6.66□□□□□ -1.34
GYPB-204ENST00000504951 RPP40O75818 363 aaKnown RBP6.66□□□□□ -1.34
GYPB-204ENST00000504951 RHOBTB1O94844 696 aa6.66□□□□□ -1.34
GYPB-204ENST00000504951 ERLIN2O94905 339 aa6.66□□□□□ -1.34
GYPB-204ENST00000504951 THP07101 528 aa6.66□□□□□ -1.34
GYPB-204ENST00000504951 P4HBP07237 508 aaKnown RBP6.66□□□□□ -1.34
GYPB-204ENST00000504951 SRGAP2CP0DJJ0 459 aa6.66□□□□□ -1.34
GYPB-204ENST00000504951 MYBP10242 640 aa6.66□□□□□ -1.34
GYPB-204ENST00000504951 ATF2P15336 505 aa6.66□□□□□ -1.34
GYPB-204ENST00000504951 ARF4P18085 180 aaPredicted RBP6.66□□□□□ -1.34
GYPB-204ENST00000504951 CCNE1P24864 410 aa6.66□□□□□ -1.34
GYPB-204ENST00000504951 GDI1P31150 447 aa6.66□□□□□ -1.34
GYPB-204ENST00000504951 ADD1P35611 737 aaKnown RBP6.66□□□□□ -1.34
GYPB-204ENST00000504951 MPLP40238 635 aa6.66□□□□□ -1.34
GYPB-204ENST00000504951 NOVA1P51513 510 aaKnown RBP6.66□□□□□ -1.34
GYPB-204ENST00000504951 PPP2R5CQ13362 524 aa6.66□□□□□ -1.34
GYPB-204ENST00000504951 MRPL58Q14197 206 aaKnown RBP6.66□□□□□ -1.34
GYPB-204ENST00000504951 RTN1Q16799 776 aa6.66□□□□□ -1.34
GYPB-204ENST00000504951 FAM187BQ17R55 369 aa6.66□□□□□ -1.34
GYPB-204ENST00000504951 PLK5Q496M5 336 aa6.66□□□□□ -1.34
GYPB-204ENST00000504951 MSS51Q4VC12 460 aa6.66□□□□□ -1.34
GYPB-204ENST00000504951 WDR44Q5JSH3 913 aa6.66□□□□□ -1.34
GYPB-204ENST00000504951 SLC27A1Q6PCB7 646 aa6.66□□□□□ -1.34
GYPB-204ENST00000504951 OTUD6AQ7L8S5 288 aa6.66□□□□□ -1.34
GYPB-204ENST00000504951 KBTBD6Q86V97 674 aa6.66□□□□□ -1.34
GYPB-204ENST00000504951 FBXL16Q8N461 479 aa6.66□□□□□ -1.34
GYPB-204ENST00000504951 RNF149Q8NC42 400 aa6.66□□□□□ -1.34
GYPB-204ENST00000504951 ST13P5Q8NFI4 369 aaPredicted RBP6.66□□□□□ -1.34
GYPB-204ENST00000504951 ETNPPLQ8TBG4 499 aa6.66□□□□□ -1.34
GYPB-204ENST00000504951 ZCCHC14Q8WYQ9 949 aaKnown RBP6.66□□□□□ -1.34
GYPB-204ENST00000504951 CCDC136Q96JN2 1154 aa6.66□□□□□ -1.34
GYPB-204ENST00000504951 SH3GLB2Q9NR46 395 aa6.66□□□□□ -1.34
GYPB-204ENST00000504951 CACNA2D2Q9NY47 1150 aa6.66□□□□□ -1.34
GYPB-204ENST00000504951 GMPR2Q9P2T1 348 aaKnown RBP6.66□□□□□ -1.34
GYPB-204ENST00000504951 TPCN1Q9ULQ1 816 aa6.66□□□□□ -1.34
GYPB-204ENST00000504951 POLIQ9UNA4 740 aa6.66□□□□□ -1.34
GYPB-204ENST00000504951 GPSM3Q9Y4H4 160 aa6.66□□□□□ -1.34
GYPB-204ENST00000504951 HELZ2Q9BYK8 2649 aaKnown RBP6.66□□□□□ -1.34
GYPB-204ENST00000504951 KLF18A0A0U1RQI7 1052 aa6.65□□□□□ -1.34
GYPB-204ENST00000504951 GOLGA8AA7E2F4 631 aa6.65□□□□□ -1.34
GYPB-204ENST00000504951 GOLGA8BA8MQT2 603 aa6.65□□□□□ -1.34
GYPB-204ENST00000504951 KIF4AO95239 1232 aa6.65□□□□□ -1.34
GYPB-204ENST00000504951 LYPLA2O95372 231 aa6.65□□□□□ -1.34
GYPB-204ENST00000504951 CEBPBP17676 345 aa6.65□□□□□ -1.34
GYPB-204ENST00000504951 CTHP32929 405 aa6.65□□□□□ -1.34
GYPB-204ENST00000504951 ARL2P36404 184 aa6.65□□□□□ -1.34
GYPB-204ENST00000504951 PLCB2Q00722 1185 aa6.65□□□□□ -1.34
GYPB-204ENST00000504951 MBTD1Q05BQ5 628 aa6.65□□□□□ -1.34
GYPB-204ENST00000504951 ZNF252P-AS1Q0IIN9 211 aa6.65□□□□□ -1.34
GYPB-204ENST00000504951 SRSF5Q13243 272 aaKnown RBP6.65□□□□□ -1.34
GYPB-204ENST00000504951 TFDP1Q14186 410 aa6.65□□□□□ -1.34
GYPB-204ENST00000504951 KARSQ15046 597 aaKnown RBP6.65□□□□□ -1.34
GYPB-204ENST00000504951 ARHGAP29Q52LW3 1261 aa6.65□□□□□ -1.34
GYPB-204ENST00000504951 CYP4A22Q5TCH4 519 aa6.65□□□□□ -1.34
GYPB-204ENST00000504951 SH3PXD2AQ5TCZ1 1133 aa6.65□□□□□ -1.34
GYPB-204ENST00000504951 CD300LGQ6UXG3 332 aa6.65□□□□□ -1.34
GYPB-204ENST00000504951 DHX32Q7L7V1 743 aaKnown RBP6.65□□□□□ -1.34
GYPB-204ENST00000504951 PROSER1Q86XN7 944 aa6.65□□□□□ -1.34
GYPB-204ENST00000504951 GLYCTKQ8IVS8 523 aa6.65□□□□□ -1.34
GYPB-204ENST00000504951 CSGALNACT1Q8TDX6 532 aa6.65□□□□□ -1.34
GYPB-204ENST00000504951 GJA10Q969M2 543 aa6.65□□□□□ -1.34
GYPB-204ENST00000504951 CEP170P1Q96L14 293 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms