RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 SIX4Q9UIU6 781 aa14.25□□□□□ -0.13
LMNA-220ENST00000504687 TRPV2Q9Y5S1 764 aa14.25□□□□□ -0.13
LMNA-220ENST00000504687 SAR1BQ9Y6B6 198 aa14.25□□□□□ -0.13
LMNA-220ENST00000504687 CSDE1O75534 798 aaKnown RBP14.24□□□□□ -0.13
LMNA-220ENST00000504687 MOCS3O95396 460 aa14.24□□□□□ -0.13
LMNA-220ENST00000504687 ELNP15502 786 aa14.24□□□□□ -0.13
LMNA-220ENST00000504687 TCP1P17987 556 aaKnown RBP14.24□□□□□ -0.13
LMNA-220ENST00000504687 MYL6P60660 151 aa14.24□□□□□ -0.13
LMNA-220ENST00000504687 ZNF200P98182 395 aaPredicted RBP14.24□□□□□ -0.13
LMNA-220ENST00000504687 ITIH3Q06033 890 aa14.24□□□□□ -0.13
LMNA-220ENST00000504687 MGAT3Q09327 533 aa14.24□□□□□ -0.13
LMNA-220ENST00000504687 TMEM132DQ14C87 1099 aa14.24□□□□□ -0.13
LMNA-220ENST00000504687 KCNA10Q16322 511 aa14.24□□□□□ -0.13
LMNA-220ENST00000504687 FAM26DQ5JW98 314 aa14.24□□□□□ -0.13
LMNA-220ENST00000504687 JADE1Q6IE81 842 aa14.24□□□□□ -0.13
LMNA-220ENST00000504687 GDF6Q6KF10 455 aaPredicted RBP14.24□□□□□ -0.13
LMNA-220ENST00000504687 ZNF572Q7Z3I7 529 aaPredicted RBP14.24□□□□□ -0.13
LMNA-220ENST00000504687 CDR2LQ86X02 465 aaPredicted RBP14.24□□□□□ -0.13
LMNA-220ENST00000504687 SYCE1Q8N0S2 351 aa14.24□□□□□ -0.13
LMNA-220ENST00000504687 LRRC57Q8N9N7 239 aa14.24□□□□□ -0.13
LMNA-220ENST00000504687 SLC20A1Q8WUM9 679 aa14.24□□□□□ -0.13
LMNA-220ENST00000504687 TMEM40Q8WWA1 233 aa14.24□□□□□ -0.13
LMNA-220ENST00000504687 BEGAINQ9BUH8 593 aa14.24□□□□□ -0.13
LMNA-220ENST00000504687 TRAIPQ9BWF2 469 aa14.24□□□□□ -0.13
LMNA-220ENST00000504687 SNX12Q9UMY4 172 aa14.24□□□□□ -0.13
LMNA-220ENST00000504687 GRIN2DO15399 1336 aa14.23□□□□□ -0.13
LMNA-220ENST00000504687 PCNTO95613 3336 aa14.23□□□□□ -0.13
LMNA-220ENST00000504687 M0QZ92 97 aa14.23□□□□□ -0.13
LMNA-220ENST00000504687 TADA3O75528 432 aa14.23□□□□□ -0.13
LMNA-220ENST00000504687 CYP1A1P04798 512 aaPredicted RBP14.23□□□□□ -0.13
LMNA-220ENST00000504687 ATP1A1P05023 1023 aaKnown RBP14.23□□□□□ -0.13
LMNA-220ENST00000504687 NFICP08651 508 aa14.23□□□□□ -0.13
LMNA-220ENST00000504687 UNGP13051 313 aaPredicted RBP14.23□□□□□ -0.13
LMNA-220ENST00000504687 P4HA1P13674 534 aa14.23□□□□□ -0.13
LMNA-220ENST00000504687 KCNE1P15382 129 aa14.23□□□□□ -0.13
LMNA-220ENST00000504687 USP8P40818 1118 aa14.23□□□□□ -0.13
LMNA-220ENST00000504687 ASPAP45381 313 aa14.23□□□□□ -0.13
LMNA-220ENST00000504687 YARSP54577 528 aaKnown RBP14.23□□□□□ -0.13
LMNA-220ENST00000504687 PTK7Q13308 1070 aa14.23□□□□□ -0.13
LMNA-220ENST00000504687 CLEC16AQ2KHT3 1053 aa14.23□□□□□ -0.13
LMNA-220ENST00000504687 ZNF699Q32M78 642 aa14.23□□□□□ -0.13
LMNA-220ENST00000504687 UBXN11Q5T124 520 aa14.23□□□□□ -0.13
LMNA-220ENST00000504687 MEI1Q5TIA1 1274 aa14.23□□□□□ -0.13
LMNA-220ENST00000504687 SPOPLQ6IQ16 392 aa14.23□□□□□ -0.13
LMNA-220ENST00000504687 ACAD10Q6JQN1 1059 aa14.23□□□□□ -0.13
LMNA-220ENST00000504687 GPIHBP1Q8IV16 184 aa14.23□□□□□ -0.13
LMNA-220ENST00000504687 SLC43A3Q8NBI5 491 aa14.23□□□□□ -0.13
LMNA-220ENST00000504687 TPCN2Q8NHX9 752 aa14.23□□□□□ -0.13
LMNA-220ENST00000504687 RAET1EQ8TD07 263 aa14.23□□□□□ -0.13
LMNA-220ENST00000504687 FAM212AQ96EL1 285 aa14.23□□□□□ -0.13
LMNA-220ENST00000504687 TRIM11Q96F44 468 aa14.23□□□□□ -0.13
LMNA-220ENST00000504687 VCPIP1Q96JH7 1222 aa14.23□□□□□ -0.13
LMNA-220ENST00000504687 PPP1R16BQ96T49 567 aa14.23□□□□□ -0.13
LMNA-220ENST00000504687 PCDHB18PQ96TA0 734 aa14.23□□□□□ -0.13
LMNA-220ENST00000504687 ARID3AQ99856 593 aa14.23□□□□□ -0.13
LMNA-220ENST00000504687 SENP6Q9GZR1 1112 aaPredicted RBP14.23□□□□□ -0.13
LMNA-220ENST00000504687 AVENQ9NQS1 362 aaPredicted RBP14.23□□□□□ -0.13
LMNA-220ENST00000504687 GTF3C4Q9UKN8 822 aa14.23□□□□□ -0.13
LMNA-220ENST00000504687 GRID2IPA4D2P6 1211 aa14.22□□□□□ -0.13
LMNA-220ENST00000504687 NPTXRO95502 500 aa14.22□□□□□ -0.13
LMNA-220ENST00000504687 FTLP02792 175 aaPredicted RBP14.22□□□□□ -0.13
LMNA-220ENST00000504687 CYP1A2P05177 515 aa14.22□□□□□ -0.13
LMNA-220ENST00000504687 MMEP08473 750 aa14.22□□□□□ -0.13
LMNA-220ENST00000504687 PAEPP09466 180 aa14.22□□□□□ -0.13
LMNA-220ENST00000504687 MYBL1P10243 752 aa14.22□□□□□ -0.13
LMNA-220ENST00000504687 KRT5P13647 590 aa14.22□□□□□ -0.13
LMNA-220ENST00000504687 CYP3A5P20815 502 aa14.22□□□□□ -0.13
LMNA-220ENST00000504687 OSTNP61366 133 aa14.22□□□□□ -0.13
LMNA-220ENST00000504687 GPC5P78333 572 aa14.22□□□□□ -0.13
LMNA-220ENST00000504687 RBP5P82980 135 aa14.22□□□□□ -0.13
LMNA-220ENST00000504687 CENPCQ03188 943 aa14.22□□□□□ -0.13
LMNA-220ENST00000504687 TMEM62Q0P6H9 643 aa14.22□□□□□ -0.13
LMNA-220ENST00000504687 ZNF667Q5HYK9 610 aa14.22□□□□□ -0.13
LMNA-220ENST00000504687 RSRC2Q7L4I2 434 aaKnown RBP14.22□□□□□ -0.13
LMNA-220ENST00000504687 FAM228AQ86W67 206 aa14.22□□□□□ -0.13
LMNA-220ENST00000504687 PALB2Q86YC2 1186 aa14.22□□□□□ -0.13
LMNA-220ENST00000504687 LRRC52Q8N7C0 313 aa14.22□□□□□ -0.13
LMNA-220ENST00000504687 USP38Q8NB14 1042 aa14.22□□□□□ -0.13
LMNA-220ENST00000504687 RBBP8NLQ8NC74 664 aaPredicted RBP14.22□□□□□ -0.13
LMNA-220ENST00000504687 MNS1Q8NEH6 495 aa14.22□□□□□ -0.13
LMNA-220ENST00000504687 FAM84AQ96KN4 292 aa14.22□□□□□ -0.13
LMNA-220ENST00000504687 CARD6Q9BX69 1037 aa14.22□□□□□ -0.13
LMNA-220ENST00000504687 TLR10Q9BXR5 811 aa14.22□□□□□ -0.13
LMNA-220ENST00000504687 ZNF518BQ9C0D4 1074 aa14.22□□□□□ -0.13
LMNA-220ENST00000504687 ABCB6Q9NP58 842 aa14.22□□□□□ -0.13
LMNA-220ENST00000504687 CISHQ9NSE2 258 aa14.22□□□□□ -0.13
LMNA-220ENST00000504687 UVRAGQ9P2Y5 699 aa14.22□□□□□ -0.13
LMNA-220ENST00000504687 PCDHGC3Q9UN70 934 aa14.22□□□□□ -0.13
LMNA-220ENST00000504687 HYOU1Q9Y4L1 999 aa14.22□□□□□ -0.13
LMNA-220ENST00000504687 PCDHB4Q9Y5E5 795 aa14.22□□□□□ -0.13
LMNA-220ENST00000504687 CDY2AQ9Y6F7 541 aa14.22□□□□□ -0.13
LMNA-220ENST00000504687 TRIP11Q15643 1979 aa14.22□□□□□ -0.13
LMNA-220ENST00000504687 UMODL1Q5DID0 1318 aa14.21□□□□□ -0.13
LMNA-220ENST00000504687 XPOTO43592 962 aaKnown RBP14.21□□□□□ -0.13
LMNA-220ENST00000504687 PALMO75781 387 aa14.21□□□□□ -0.13
LMNA-220ENST00000504687 CAPN15O75808 1086 aa14.21□□□□□ -0.13
LMNA-220ENST00000504687 LSM8O95777 96 aaKnown RBP14.21□□□□□ -0.13
LMNA-220ENST00000504687 ITGB3P05106 788 aa14.21□□□□□ -0.13
LMNA-220ENST00000504687 FGFR4P22455 802 aa14.21□□□□□ -0.13
LMNA-220ENST00000504687 CDH5P33151 784 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms