RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 SPATA1Q5VX52 437 aa15.23■□□□□ 0.03
PDLIM7-211ENST00000504318 ELMSAN1Q6PJG2 1045 aa15.23■□□□□ 0.03
PDLIM7-211ENST00000504318 RTL10Q7L3V2 364 aa15.23■□□□□ 0.03
PDLIM7-211ENST00000504318 GRASPQ7Z6J2 395 aaPredicted RBP15.23■□□□□ 0.03
PDLIM7-211ENST00000504318 ZSWIM2Q8NEG5 633 aa15.23■□□□□ 0.03
PDLIM7-211ENST00000504318 ZNF461Q8TAF7 563 aa15.23■□□□□ 0.03
PDLIM7-211ENST00000504318 STAMQ92783 540 aa15.23■□□□□ 0.03
PDLIM7-211ENST00000504318 KIF12Q96FN5 646 aa15.23■□□□□ 0.03
PDLIM7-211ENST00000504318 BICD1Q96G01 975 aa15.23■□□□□ 0.03
PDLIM7-211ENST00000504318 OLFML3Q9NRN5 406 aa15.23■□□□□ 0.03
PDLIM7-211ENST00000504318 HCFC1R1Q9NWW0 138 aa15.23■□□□□ 0.03
PDLIM7-211ENST00000504318 IGSF9Q9P2J2 1179 aa15.23■□□□□ 0.03
PDLIM7-211ENST00000504318 DNMT3BQ9UBC3 853 aaKnown RBP15.23■□□□□ 0.03
PDLIM7-211ENST00000504318 SEL1LQ9UBV2 794 aa15.23■□□□□ 0.03
PDLIM7-211ENST00000504318 CCDC39Q9UFE4 941 aa15.23■□□□□ 0.03
PDLIM7-211ENST00000504318 UBQLN1Q9UMX0 589 aaKnown RBP15.23■□□□□ 0.03
PDLIM7-211ENST00000504318 PCDHB8Q9UN66 801 aa15.23■□□□□ 0.03
PDLIM7-211ENST00000504318 COL4A3Q01955 1670 aa15.22■□□□□ 0.03
PDLIM7-211ENST00000504318 USP34Q70CQ2 3546 aa15.22■□□□□ 0.03
PDLIM7-211ENST00000504318 ANO9A1A5B4 782 aa15.22■□□□□ 0.03
PDLIM7-211ENST00000504318 SPTLC1O15269 473 aa15.22■□□□□ 0.03
PDLIM7-211ENST00000504318 OAZ2O95190 189 aa15.22■□□□□ 0.03
PDLIM7-211ENST00000504318 NFICP08651 508 aa15.22■□□□□ 0.03
PDLIM7-211ENST00000504318 ATF2P15336 505 aa15.22■□□□□ 0.03
PDLIM7-211ENST00000504318 AVPR2P30518 371 aa15.22■□□□□ 0.03
PDLIM7-211ENST00000504318 KYAT1Q16773 422 aa15.22■□□□□ 0.03
PDLIM7-211ENST00000504318 SLC5A9Q2M3M2 681 aa15.22■□□□□ 0.03
PDLIM7-211ENST00000504318 PPM1LQ5SGD2 360 aa15.22■□□□□ 0.03
PDLIM7-211ENST00000504318 JADE1Q6IE81 842 aa15.22■□□□□ 0.03
PDLIM7-211ENST00000504318 SHC4Q6S5L8 630 aa15.22■□□□□ 0.03
PDLIM7-211ENST00000504318 GET4Q7L5D6 327 aaPredicted RBP15.22■□□□□ 0.03
PDLIM7-211ENST00000504318 TCEAL8Q8IYN2 117 aa15.22■□□□□ 0.03
PDLIM7-211ENST00000504318 SLC44A3Q8N4M1 653 aa15.22■□□□□ 0.03
PDLIM7-211ENST00000504318 TMEM105Q8N8V8 129 aa15.22■□□□□ 0.03
PDLIM7-211ENST00000504318 RASSF8Q8NHQ8 419 aa15.22■□□□□ 0.03
PDLIM7-211ENST00000504318 ITFG1Q8TB96 612 aa15.22■□□□□ 0.03
PDLIM7-211ENST00000504318 HVCN1Q96D96 273 aa15.22■□□□□ 0.03
PDLIM7-211ENST00000504318 TSPAN18Q96SJ8 248 aa15.22■□□□□ 0.03
PDLIM7-211ENST00000504318 MSTO1Q9BUK6 570 aa15.22■□□□□ 0.03
PDLIM7-211ENST00000504318 RPP25Q9BUL9 199 aaKnown RBP15.22■□□□□ 0.03
PDLIM7-211ENST00000504318 AVENQ9NQS1 362 aaPredicted RBP15.22■□□□□ 0.03
PDLIM7-211ENST00000504318 KBTBD4Q9NVX7 518 aa15.22■□□□□ 0.03
PDLIM7-211ENST00000504318 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.22■□□□□ 0.03
PDLIM7-211ENST00000504318 TFIP11Q9UBB9 837 aaKnown RBP15.22■□□□□ 0.03
PDLIM7-211ENST00000504318 PIRO00625 290 aa15.21■□□□□ 0.03
PDLIM7-211ENST00000504318 SPTLC2O15270 562 aa15.21■□□□□ 0.03
PDLIM7-211ENST00000504318 YEATS4O95619 227 aa15.21■□□□□ 0.03
PDLIM7-211ENST00000504318 KRT18P05783 430 aaKnown RBP15.21■□□□□ 0.03
PDLIM7-211ENST00000504318 GBP2P32456 591 aaPredicted RBP15.21■□□□□ 0.03
PDLIM7-211ENST00000504318 ABCD1P33897 745 aa15.21■□□□□ 0.03
PDLIM7-211ENST00000504318 ACOT2P49753 483 aa15.21■□□□□ 0.03
PDLIM7-211ENST00000504318 POU5F1Q01860 360 aaKnown RBP15.21■□□□□ 0.03
PDLIM7-211ENST00000504318 PPP2R3AQ06190 1150 aa15.21■□□□□ 0.03
PDLIM7-211ENST00000504318 PRSS36Q5K4E3 855 aa15.21■□□□□ 0.03
PDLIM7-211ENST00000504318 L1TD1Q5T7N2 865 aaKnown RBP15.21■□□□□ 0.03
PDLIM7-211ENST00000504318 LIN9Q5TKA1 542 aa15.21■□□□□ 0.03
PDLIM7-211ENST00000504318 SCARA3Q6AZY7 606 aa15.21■□□□□ 0.03
PDLIM7-211ENST00000504318 CCDC73Q6ZRK6 1079 aa15.21■□□□□ 0.03
PDLIM7-211ENST00000504318 SV2BQ7L1I2 683 aa15.21■□□□□ 0.03
PDLIM7-211ENST00000504318 EFCAB13Q8IY85 973 aa15.21■□□□□ 0.03
PDLIM7-211ENST00000504318 GLIS3Q8NEA6 775 aa15.21■□□□□ 0.03
PDLIM7-211ENST00000504318 CXorf38Q8TB03 319 aa15.21■□□□□ 0.03
PDLIM7-211ENST00000504318 PANK2Q9BZ23 570 aa15.21■□□□□ 0.03
PDLIM7-211ENST00000504318 ZHX3Q9H4I2 956 aa15.21■□□□□ 0.03
PDLIM7-211ENST00000504318 RPF1Q9H9Y2 349 aaKnown RBP15.21■□□□□ 0.03
PDLIM7-211ENST00000504318 COL4A2P08572 1712 aa15.2■□□□□ 0.02
PDLIM7-211ENST00000504318 KRBA1A5PL33 1030 aa15.2■□□□□ 0.02
PDLIM7-211ENST00000504318 F13A1P00488 732 aa15.2■□□□□ 0.02
PDLIM7-211ENST00000504318 ZSCAN22P10073 491 aaPredicted RBP15.2■□□□□ 0.02
PDLIM7-211ENST00000504318 GAP43P17677 238 aa15.2■□□□□ 0.02
PDLIM7-211ENST00000504318 FSHRP23945 695 aa15.2■□□□□ 0.02
PDLIM7-211ENST00000504318 MCM4P33991 863 aa15.2■□□□□ 0.02
PDLIM7-211ENST00000504318 HOXD13P35453 343 aa15.2■□□□□ 0.02
PDLIM7-211ENST00000504318 MATR3P43243 847 aaKnown RBP eCLIP15.2■□□□□ 0.02
PDLIM7-211ENST00000504318 LILRA4P59901 499 aa15.2■□□□□ 0.02
PDLIM7-211ENST00000504318 EHHADHQ08426 723 aa15.2■□□□□ 0.02
PDLIM7-211ENST00000504318 C9orf57Q5W0N0 161 aa15.2■□□□□ 0.02
PDLIM7-211ENST00000504318 CNNM4Q6P4Q7 775 aa15.2■□□□□ 0.02
PDLIM7-211ENST00000504318 CD302Q8IX05 232 aa15.2■□□□□ 0.02
PDLIM7-211ENST00000504318 FGF13Q92913 245 aa15.2■□□□□ 0.02
PDLIM7-211ENST00000504318 FGF14Q92915 247 aa15.2■□□□□ 0.02
PDLIM7-211ENST00000504318 NXPE3Q969Y0 559 aa15.2■□□□□ 0.02
PDLIM7-211ENST00000504318 BORCS6Q96GS4 357 aa15.2■□□□□ 0.02
PDLIM7-211ENST00000504318 IPO9Q96P70 1041 aaKnown RBP15.2■□□□□ 0.02
PDLIM7-211ENST00000504318 PHOX2BQ99453 314 aa15.2■□□□□ 0.02
PDLIM7-211ENST00000504318 CRISPLD1Q9H336 500 aa15.2■□□□□ 0.02
PDLIM7-211ENST00000504318 PIDD1Q9HB75 910 aa15.2■□□□□ 0.02
PDLIM7-211ENST00000504318 AGO2Q9UKV8 859 aaKnown RBP15.2■□□□□ 0.02
PDLIM7-211ENST00000504318 CDH7Q9ULB5 785 aa15.2■□□□□ 0.02
PDLIM7-211ENST00000504318 DERAQ9Y315 318 aa15.2■□□□□ 0.02
PDLIM7-211ENST00000504318 C2CD2Q9Y426 696 aa15.2■□□□□ 0.02
PDLIM7-211ENST00000504318 NUB1Q9Y5A7 615 aa15.2■□□□□ 0.02
PDLIM7-211ENST00000504318 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.2■□□□□ 0.02
PDLIM7-211ENST00000504318 NUMBLQ9Y6R0 609 aa15.2■□□□□ 0.02
PDLIM7-211ENST00000504318 TCHHQ07283 1943 aa15.19■□□□□ 0.02
PDLIM7-211ENST00000504318 H7C4K7 107 aa15.19■□□□□ 0.02
PDLIM7-211ENST00000504318 MOSPD3O75425 235 aa15.19■□□□□ 0.02
PDLIM7-211ENST00000504318 RHOP08100 348 aa15.19■□□□□ 0.02
PDLIM7-211ENST00000504318 CCR2P41597 374 aa15.19■□□□□ 0.02
PDLIM7-211ENST00000504318 STAT6P42226 847 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms