RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 PTPRHQ9HD43 1115 aa11.72□□□□□ -0.53
SNCA-207ENST00000502987 ARHGAP28Q9P2N2 729 aa11.72□□□□□ -0.53
SNCA-207ENST00000502987 DNMT3BQ9UBC3 853 aaKnown RBP11.72□□□□□ -0.53
SNCA-207ENST00000502987 SMC3Q9UQE7 1217 aa11.72□□□□□ -0.53
SNCA-207ENST00000502987 MIA3Q5JRA6 1907 aa11.72□□□□□ -0.53
SNCA-207ENST00000502987 PTPRZ1P23471 2315 aaPredicted RBP11.71□□□□□ -0.53
SNCA-207ENST00000502987 FRYLO94915 3013 aa11.71□□□□□ -0.53
SNCA-207ENST00000502987 NPHP3-ACAD11A0A0J9YXS1 232 aa11.71□□□□□ -0.53
SNCA-207ENST00000502987 TOM1L1O75674 476 aa11.71□□□□□ -0.53
SNCA-207ENST00000502987 KRT18P05783 430 aaKnown RBP11.71□□□□□ -0.53
SNCA-207ENST00000502987 KCNE1P15382 129 aa11.71□□□□□ -0.53
SNCA-207ENST00000502987 GUCY2CP25092 1073 aa11.71□□□□□ -0.53
SNCA-207ENST00000502987 UBA7P41226 1012 aa11.71□□□□□ -0.53
SNCA-207ENST00000502987 ATP2C1P98194 919 aaPredicted RBP11.71□□□□□ -0.53
SNCA-207ENST00000502987 ROR1Q01973 937 aa11.71□□□□□ -0.53
SNCA-207ENST00000502987 MAPK7Q13164 816 aa11.71□□□□□ -0.53
SNCA-207ENST00000502987 NOLC1Q14978 699 aaKnown RBP eCLIP11.71□□□□□ -0.53
SNCA-207ENST00000502987 CTXN3Q4LDR2 81 aa11.71□□□□□ -0.53
SNCA-207ENST00000502987 PHLDB3Q6NSJ2 640 aa11.71□□□□□ -0.53
SNCA-207ENST00000502987 CD300LGQ6UXG3 332 aa11.71□□□□□ -0.53
SNCA-207ENST00000502987 RTL10Q7L3V2 364 aa11.71□□□□□ -0.53
SNCA-207ENST00000502987 ELMOD1Q8N336 334 aa11.71□□□□□ -0.53
SNCA-207ENST00000502987 SYT2Q8N9I0 419 aaPredicted RBP11.71□□□□□ -0.53
SNCA-207ENST00000502987 ZNF461Q8TAF7 563 aa11.71□□□□□ -0.53
SNCA-207ENST00000502987 SPIRE2Q8WWL2 714 aa11.71□□□□□ -0.53
SNCA-207ENST00000502987 CALML4Q96GE6 196 aa11.71□□□□□ -0.53
SNCA-207ENST00000502987 TMX3Q96JJ7 454 aa11.71□□□□□ -0.53
SNCA-207ENST00000502987 PNMA5Q96PV4 448 aa11.71□□□□□ -0.53
SNCA-207ENST00000502987 CORO1BQ9BR76 489 aa11.71□□□□□ -0.53
SNCA-207ENST00000502987 NTPCRQ9BSD7 190 aaKnown RBP11.71□□□□□ -0.53
SNCA-207ENST00000502987 ZHX3Q9H4I2 956 aa11.71□□□□□ -0.53
SNCA-207ENST00000502987 SLC2A4RGQ9NR83 387 aa11.71□□□□□ -0.53
SNCA-207ENST00000502987 LARSQ9P2J5 1176 aaKnown RBP11.71□□□□□ -0.53
SNCA-207ENST00000502987 KCNH3Q9ULD8 1083 aa11.71□□□□□ -0.53
SNCA-207ENST00000502987 VPS9D1Q9Y2B5 631 aa11.71□□□□□ -0.53
SNCA-207ENST00000502987 DMDP11532 3685 aa11.71□□□□□ -0.54
SNCA-207ENST00000502987 NOTCH4Q99466 2003 aa11.7□□□□□ -0.54
SNCA-207ENST00000502987 PDCD11Q14690 1871 aaKnown RBP11.7□□□□□ -0.54
SNCA-207ENST00000502987 H0YCG3 227 aa11.7□□□□□ -0.54
SNCA-207ENST00000502987 TULP1O00294 542 aaPredicted RBP11.7□□□□□ -0.54
SNCA-207ENST00000502987 SYN3O14994 580 aa11.7□□□□□ -0.54
SNCA-207ENST00000502987 RHOP08100 348 aa11.7□□□□□ -0.54
SNCA-207ENST00000502987 PROZP22891 400 aa11.7□□□□□ -0.54
SNCA-207ENST00000502987 PFKPQ01813 784 aa11.7□□□□□ -0.54
SNCA-207ENST00000502987 SPAG1Q07617 926 aa11.7□□□□□ -0.54
SNCA-207ENST00000502987 UBXN2BQ14CS0 331 aa11.7□□□□□ -0.54
SNCA-207ENST00000502987 SLC10A6Q3KNW5 377 aa11.7□□□□□ -0.54
SNCA-207ENST00000502987 SLC44A4Q53GD3 710 aa11.7□□□□□ -0.54
SNCA-207ENST00000502987 XKR4Q5GH76 650 aa11.7□□□□□ -0.54
SNCA-207ENST00000502987 PPP1R15BQ5SWA1 713 aa11.7□□□□□ -0.54
SNCA-207ENST00000502987 LARP1BQ659C4 914 aaKnown RBP11.7□□□□□ -0.54
SNCA-207ENST00000502987 ADSSL1Q8N142 457 aa11.7□□□□□ -0.54
SNCA-207ENST00000502987 TMEM161BQ8NDZ6 487 aa11.7□□□□□ -0.54
SNCA-207ENST00000502987 APPL2Q8NEU8 664 aa11.7□□□□□ -0.54
SNCA-207ENST00000502987 TBC1D32Q96NH3 1257 aa11.7□□□□□ -0.54
SNCA-207ENST00000502987 FOXQ1Q9C009 403 aa11.7□□□□□ -0.54
SNCA-207ENST00000502987 CNTN3Q9P232 1028 aa11.7□□□□□ -0.54
SNCA-207ENST00000502987 WDR27A2RRH5 827 aa11.69□□□□□ -0.54
SNCA-207ENST00000502987 ZNF197O14709 1029 aa11.69□□□□□ -0.54
SNCA-207ENST00000502987 FAM13AO94988 1023 aa11.69□□□□□ -0.54
SNCA-207ENST00000502987 POU2F2P09086 479 aa11.69□□□□□ -0.54
SNCA-207ENST00000502987 CLTAP09496 248 aa11.69□□□□□ -0.54
SNCA-207ENST00000502987 CXCL8P10145 99 aa11.69□□□□□ -0.54
SNCA-207ENST00000502987 MAPTP10636 758 aaKnown RBP11.69□□□□□ -0.54
SNCA-207ENST00000502987 CPB1P15086 417 aa11.69□□□□□ -0.54
SNCA-207ENST00000502987 ATF2P15336 505 aa11.69□□□□□ -0.54
SNCA-207ENST00000502987 LIG4P49917 911 aa11.69□□□□□ -0.54
SNCA-207ENST00000502987 SLC12A3P55017 1021 aa11.69□□□□□ -0.54
SNCA-207ENST00000502987 MLF2Q15773 248 aaPredicted RBP11.69□□□□□ -0.54
SNCA-207ENST00000502987 HYIQ5T013 277 aa11.69□□□□□ -0.54
SNCA-207ENST00000502987 CYP4A22Q5TCH4 519 aa11.69□□□□□ -0.54
SNCA-207ENST00000502987 ARL6IP4Q66PJ3 421 aaKnown RBP11.69□□□□□ -0.54
SNCA-207ENST00000502987 IQCEQ6IPM2 695 aa11.69□□□□□ -0.54
SNCA-207ENST00000502987 SLC8B1Q6J4K2 584 aa11.69□□□□□ -0.54
SNCA-207ENST00000502987 ZNF280DQ6N043 979 aa11.69□□□□□ -0.54
SNCA-207ENST00000502987 ZPBP2Q6X784 338 aa11.69□□□□□ -0.54
SNCA-207ENST00000502987 DSTYKQ6XUX3 929 aa11.69□□□□□ -0.54
SNCA-207ENST00000502987 HAUS6Q7Z4H7 955 aa11.69□□□□□ -0.54
SNCA-207ENST00000502987 USP37Q86T82 979 aa11.69□□□□□ -0.54
SNCA-207ENST00000502987 GPBP1Q86WP2 473 aa11.69□□□□□ -0.54
SNCA-207ENST00000502987 C1orf210Q8IVY1 113 aa11.69□□□□□ -0.54
SNCA-207ENST00000502987 NPAS3Q8IXF0 933 aa11.69□□□□□ -0.54
SNCA-207ENST00000502987 KCTD17Q8N5Z5 321 aa11.69□□□□□ -0.54
SNCA-207ENST00000502987 MYCT1Q8N699 235 aa11.69□□□□□ -0.54
SNCA-207ENST00000502987 PJA1Q8NG27 643 aa11.69□□□□□ -0.54
SNCA-207ENST00000502987 SUSD3Q96L08 255 aa11.69□□□□□ -0.54
SNCA-207ENST00000502987 ZNF512Q96ME7 567 aaPredicted RBP11.69□□□□□ -0.54
SNCA-207ENST00000502987 HINFPQ9BQA5 517 aa11.69□□□□□ -0.54
SNCA-207ENST00000502987 BCO2Q9BYV7 579 aa11.69□□□□□ -0.54
SNCA-207ENST00000502987 KCND2Q9NZV8 630 aa11.69□□□□□ -0.54
SNCA-207ENST00000502987 TUBGCP4Q9UGJ1 667 aa11.69□□□□□ -0.54
SNCA-207ENST00000502987 FBXL5Q9UKA1 691 aa11.69□□□□□ -0.54
SNCA-207ENST00000502987 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.69□□□□□ -0.54
SNCA-207ENST00000502987 R4GN57 208 aa11.69□□□□□ -0.54
SNCA-207ENST00000502987 RIF1Q5UIP0 2472 aaKnown RBP11.69□□□□□ -0.54
SNCA-207ENST00000502987 SPTBN4Q9H254 2564 aa11.68□□□□□ -0.54
SNCA-207ENST00000502987 KANSL1LA0AUZ9 987 aa11.68□□□□□ -0.54
SNCA-207ENST00000502987 FAM170BA6NMN3 283 aa11.68□□□□□ -0.54
SNCA-207ENST00000502987 ABLIM1O14639 778 aa11.68□□□□□ -0.54
SNCA-207ENST00000502987 HNRNPDLO14979 420 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms