RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 SEMA4DQ92854 862 aa15.29■□□□□ 0.04
VPS26A-209ENST00000497564 ANKRD36BP1Q96IX9 119 aa15.29■□□□□ 0.04
VPS26A-209ENST00000497564 SNX27Q96L92 541 aa15.29■□□□□ 0.04
VPS26A-209ENST00000497564 FAM81BQ96LP2 452 aa15.29■□□□□ 0.04
VPS26A-209ENST00000497564 SNTG2Q9NY99 539 aa15.29■□□□□ 0.04
VPS26A-209ENST00000497564 XIRP2A4UGR9 3374 aa15.28■□□□□ 0.04
VPS26A-209ENST00000497564 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.28■□□□□ 0.04
VPS26A-209ENST00000497564 LRRC53A6NM62 1247 aa15.28■□□□□ 0.04
VPS26A-209ENST00000497564 ARHGAP6O43182 974 aa15.28■□□□□ 0.04
VPS26A-209ENST00000497564 TNNC2P02585 160 aa15.28■□□□□ 0.04
VPS26A-209ENST00000497564 TMEM191BP0C7N4 346 aa15.28■□□□□ 0.04
VPS26A-209ENST00000497564 CD52P31358 61 aa15.28■□□□□ 0.04
VPS26A-209ENST00000497564 RAB27AP51159 221 aa15.28■□□□□ 0.04
VPS26A-209ENST00000497564 YARSP54577 528 aaKnown RBP15.28■□□□□ 0.04
VPS26A-209ENST00000497564 APBA1Q02410 837 aa15.28■□□□□ 0.04
VPS26A-209ENST00000497564 PPP2R2DQ66LE6 453 aa15.28■□□□□ 0.04
VPS26A-209ENST00000497564 TWF2Q6IBS0 349 aaKnown RBP15.28■□□□□ 0.04
VPS26A-209ENST00000497564 PHLDB3Q6NSJ2 640 aa15.28■□□□□ 0.04
VPS26A-209ENST00000497564 WDR59Q6PJI9 974 aa15.28■□□□□ 0.04
VPS26A-209ENST00000497564 CYP26C1Q6V0L0 522 aa15.28■□□□□ 0.04
VPS26A-209ENST00000497564 RRAGAQ7L523 313 aa15.28■□□□□ 0.04
VPS26A-209ENST00000497564 TRAPPC11Q7Z392 1133 aa15.28■□□□□ 0.04
VPS26A-209ENST00000497564 FMNL3Q8IVF7 1028 aa15.28■□□□□ 0.04
VPS26A-209ENST00000497564 SMG8Q8ND04 991 aaKnown RBP15.28■□□□□ 0.04
VPS26A-209ENST00000497564 PHOSPHO2Q8TCD6 241 aa15.28■□□□□ 0.04
VPS26A-209ENST00000497564 SEPT8Q92599 483 aa15.28■□□□□ 0.04
VPS26A-209ENST00000497564 FAM212AQ96EL1 285 aa15.28■□□□□ 0.04
VPS26A-209ENST00000497564 NT5C1BQ96P26 610 aa15.28■□□□□ 0.04
VPS26A-209ENST00000497564 STK33Q9BYT3 514 aa15.28■□□□□ 0.04
VPS26A-209ENST00000497564 IFIH1Q9BYX4 1025 aaKnown RBP15.28■□□□□ 0.04
VPS26A-209ENST00000497564 MTMR12Q9C0I1 747 aa15.28■□□□□ 0.04
VPS26A-209ENST00000497564 NXF3Q9H4D5 531 aaKnown RBP15.28■□□□□ 0.04
VPS26A-209ENST00000497564 CERS4Q9HA82 394 aa15.28■□□□□ 0.04
VPS26A-209ENST00000497564 SLC28A3Q9HAS3 691 aa15.28■□□□□ 0.04
VPS26A-209ENST00000497564 NLRC4Q9NPP4 1024 aa15.28■□□□□ 0.04
VPS26A-209ENST00000497564 AIPL1Q9NZN9 384 aa15.28■□□□□ 0.04
VPS26A-209ENST00000497564 CNTN3Q9P232 1028 aa15.28■□□□□ 0.04
VPS26A-209ENST00000497564 IPPQ9Y573 584 aa15.28■□□□□ 0.04
VPS26A-209ENST00000497564 EPOPA6NHQ4 379 aa15.27■□□□□ 0.04
VPS26A-209ENST00000497564 ZNF623O75123 536 aa15.27■□□□□ 0.04
VPS26A-209ENST00000497564 RECQL4O94761 1208 aa15.27■□□□□ 0.04
VPS26A-209ENST00000497564 NFICP08651 508 aa15.27■□□□□ 0.04
VPS26A-209ENST00000497564 ZSCAN20P17040 1043 aaPredicted RBP15.27■□□□□ 0.04
VPS26A-209ENST00000497564 PIK3CAP42336 1068 aa15.27■□□□□ 0.04
VPS26A-209ENST00000497564 GCNT1Q02742 428 aa15.27■□□□□ 0.04
VPS26A-209ENST00000497564 TAP1Q03518 808 aa15.27■□□□□ 0.04
VPS26A-209ENST00000497564 NFX1Q12986 1120 aaKnown RBP15.27■□□□□ 0.04
VPS26A-209ENST00000497564 BIRC3Q13489 604 aa15.27■□□□□ 0.04
VPS26A-209ENST00000497564 ADGRE1Q14246 886 aa15.27■□□□□ 0.04
VPS26A-209ENST00000497564 TMEM132DQ14C87 1099 aa15.27■□□□□ 0.04
VPS26A-209ENST00000497564 SFMBT2Q5VUG0 894 aa15.27■□□□□ 0.04
VPS26A-209ENST00000497564 JADE1Q6IE81 842 aa15.27■□□□□ 0.04
VPS26A-209ENST00000497564 ENOSF1Q7L5Y1 443 aa15.27■□□□□ 0.04
VPS26A-209ENST00000497564 MRPL10Q7Z7H8 261 aaKnown RBP15.27■□□□□ 0.04
VPS26A-209ENST00000497564 HACE1Q8IYU2 909 aa15.27■□□□□ 0.04
VPS26A-209ENST00000497564 FAM105AQ9NUU6 356 aa15.27■□□□□ 0.04
VPS26A-209ENST00000497564 ZNHIT6Q9NWK9 470 aaKnown RBP15.27■□□□□ 0.04
VPS26A-209ENST00000497564 DNAJC12Q9UKB3 198 aa15.27■□□□□ 0.04
VPS26A-209ENST00000497564 AJAP1Q9UKB5 411 aaPredicted RBP15.27■□□□□ 0.04
VPS26A-209ENST00000497564 TTC3P53804 2025 aa15.27■□□□□ 0.03
VPS26A-209ENST00000497564 RFXAPO00287 272 aa15.26■□□□□ 0.03
VPS26A-209ENST00000497564 TLL1O43897 1013 aa15.26■□□□□ 0.03
VPS26A-209ENST00000497564 LRRN2O75325 713 aa15.26■□□□□ 0.03
VPS26A-209ENST00000497564 GJB5O95377 273 aa15.26■□□□□ 0.03
VPS26A-209ENST00000497564 ASS1P00966 412 aaKnown RBP15.26■□□□□ 0.03
VPS26A-209ENST00000497564 SKIP12755 728 aa15.26■□□□□ 0.03
VPS26A-209ENST00000497564 KCNE1P15382 129 aa15.26■□□□□ 0.03
VPS26A-209ENST00000497564 FOSL2P15408 326 aa15.26■□□□□ 0.03
VPS26A-209ENST00000497564 TFAMQ00059 246 aaKnown RBP15.26■□□□□ 0.03
VPS26A-209ENST00000497564 NCOA4Q13772 614 aa15.26■□□□□ 0.03
VPS26A-209ENST00000497564 ZBTB6Q15916 424 aa15.26■□□□□ 0.03
VPS26A-209ENST00000497564 GJB7Q6PEY0 223 aa15.26■□□□□ 0.03
VPS26A-209ENST00000497564 ARHGEF19Q8IW93 802 aa15.26■□□□□ 0.03
VPS26A-209ENST00000497564 KIAA1524Q8TCG1 905 aa15.26■□□□□ 0.03
VPS26A-209ENST00000497564 HELQQ8TDG4 1101 aa15.26■□□□□ 0.03
VPS26A-209ENST00000497564 LINC01599Q8WXQ3 324 aa15.26■□□□□ 0.03
VPS26A-209ENST00000497564 TAF4BQ92750 862 aa15.26■□□□□ 0.03
VPS26A-209ENST00000497564 JAKMIP2Q96AA8 810 aa15.26■□□□□ 0.03
VPS26A-209ENST00000497564 FAXDC2Q96IV6 333 aa15.26■□□□□ 0.03
VPS26A-209ENST00000497564 FAM84AQ96KN4 292 aa15.26■□□□□ 0.03
VPS26A-209ENST00000497564 SPAG5Q96R06 1193 aa15.26■□□□□ 0.03
VPS26A-209ENST00000497564 KCND1Q9NSA2 647 aa15.26■□□□□ 0.03
VPS26A-209ENST00000497564 PYCARDQ9ULZ3 195 aa15.26■□□□□ 0.03
VPS26A-209ENST00000497564 PCDHB2Q9Y5E7 798 aa15.26■□□□□ 0.03
VPS26A-209ENST00000497564 FNDC1Q4ZHG4 1894 aaPredicted RBP15.25■□□□□ 0.03
VPS26A-209ENST00000497564 F8VZ95 297 aa15.25■□□□□ 0.03
VPS26A-209ENST00000497564 MGEA5O60502 916 aa15.25■□□□□ 0.03
VPS26A-209ENST00000497564 PHACTR2O75167 634 aa15.25■□□□□ 0.03
VPS26A-209ENST00000497564 STAU1O95793 577 aaKnown RBP15.25■□□□□ 0.03
VPS26A-209ENST00000497564 PRKCIP41743 596 aa15.25■□□□□ 0.03
VPS26A-209ENST00000497564 STAT1P42224 750 aa15.25■□□□□ 0.03
VPS26A-209ENST00000497564 RAPGEF1Q13905 1077 aa15.25■□□□□ 0.03
VPS26A-209ENST00000497564 DRAP1Q14919 205 aaPredicted RBP15.25■□□□□ 0.03
VPS26A-209ENST00000497564 WDR44Q5JSH3 913 aa15.25■□□□□ 0.03
VPS26A-209ENST00000497564 E4F1Q66K89 784 aaPredicted RBP15.25■□□□□ 0.03
VPS26A-209ENST00000497564 HGSNATQ68CP4 663 aa15.25■□□□□ 0.03
VPS26A-209ENST00000497564 C1orf127Q8N9H9 656 aa15.25■□□□□ 0.03
VPS26A-209ENST00000497564 CXorf38Q8TB03 319 aa15.25■□□□□ 0.03
VPS26A-209ENST00000497564 ZBED2Q9BTP6 218 aa15.25■□□□□ 0.03
VPS26A-209ENST00000497564 FTHL17Q9BXU8 183 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms