RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 A0A1W2PS29 197 aa4.74□□□□□ -1.65
CBX3-208ENST00000497498 LRRC3CA6NJW4 275 aa4.74□□□□□ -1.65
CBX3-208ENST00000497498 KIAA0391O15091 583 aaKnown RBP4.74□□□□□ -1.65
CBX3-208ENST00000497498 RBMXL2O75526 392 aaKnown RBP4.74□□□□□ -1.65
CBX3-208ENST00000497498 HAUS5O94927 633 aa4.74□□□□□ -1.65
CBX3-208ENST00000497498 CDK4P11802 303 aa4.74□□□□□ -1.65
CBX3-208ENST00000497498 FCER1AP12319 257 aa4.74□□□□□ -1.65
CBX3-208ENST00000497498 SLC6A4P31645 630 aa4.74□□□□□ -1.65
CBX3-208ENST00000497498 FOLR3P41439 243 aa4.74□□□□□ -1.65
CBX3-208ENST00000497498 CREMQ03060 361 aa4.74□□□□□ -1.65
CBX3-208ENST00000497498 KLF1Q13351 362 aaPredicted RBP4.74□□□□□ -1.65
CBX3-208ENST00000497498 ATP2B3Q16720 1220 aa4.74□□□□□ -1.65
CBX3-208ENST00000497498 DCBLD1Q8N8Z6 715 aa4.74□□□□□ -1.65
CBX3-208ENST00000497498 KLK15Q9H2R5 256 aa4.74□□□□□ -1.65
CBX3-208ENST00000497498 PHLDB1Q86UU1 1377 aa4.74□□□□□ -1.65
CBX3-208ENST00000497498 TRGV11A0A075B6L2 103 aa4.73□□□□□ -1.65
CBX3-208ENST00000497498 PROM1O43490 865 aa4.73□□□□□ -1.65
CBX3-208ENST00000497498 PEX1O43933 1283 aa4.73□□□□□ -1.65
CBX3-208ENST00000497498 SRGNP10124 158 aa4.73□□□□□ -1.65
CBX3-208ENST00000497498 FOXF2Q12947 444 aa4.73□□□□□ -1.65
CBX3-208ENST00000497498 SF3B3Q15393 1217 aaKnown RBP4.73□□□□□ -1.65
CBX3-208ENST00000497498 VWA1Q6PCB0 445 aa4.73□□□□□ -1.65
CBX3-208ENST00000497498 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.73□□□□□ -1.65
CBX3-208ENST00000497498 ARHGEF25Q86VW2 580 aa4.73□□□□□ -1.65
CBX3-208ENST00000497498 RHOT1Q8IXI2 618 aa4.73□□□□□ -1.65
CBX3-208ENST00000497498 ZNF384Q8TF68 577 aa4.73□□□□□ -1.65
CBX3-208ENST00000497498 NRG4Q8WWG1 115 aa4.73□□□□□ -1.65
CBX3-208ENST00000497498 ANKS1AQ92625 1134 aa4.73□□□□□ -1.65
CBX3-208ENST00000497498 VSX1Q9NZR4 365 aaPredicted RBP4.73□□□□□ -1.65
CBX3-208ENST00000497498 INTUQ9ULD6 942 aa4.73□□□□□ -1.65
CBX3-208ENST00000497498 PRAMEF33A0A0G2JMD5 474 aa4.72□□□□□ -1.65
CBX3-208ENST00000497498 YY2O15391 372 aa4.72□□□□□ -1.65
CBX3-208ENST00000497498 PRAMEF10O60809 474 aa4.72□□□□□ -1.65
CBX3-208ENST00000497498 KRTAP10-11P60412 298 aa4.72□□□□□ -1.65
CBX3-208ENST00000497498 TARDBPQ13148 414 aaKnown RBP eCLIP4.72□□□□□ -1.65
CBX3-208ENST00000497498 INAVAQ3KP66 663 aa4.72□□□□□ -1.65
CBX3-208ENST00000497498 AMOTL1Q8IY63 956 aa4.72□□□□□ -1.65
CBX3-208ENST00000497498 SRRM1Q8IYB3 904 aaKnown RBP4.72□□□□□ -1.65
CBX3-208ENST00000497498 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.72□□□□□ -1.65
CBX3-208ENST00000497498 TIMP4Q99727 224 aa4.72□□□□□ -1.65
CBX3-208ENST00000497498 HEPHQ9BQS7 1158 aa4.72□□□□□ -1.65
CBX3-208ENST00000497498 FAM126AQ9BYI3 521 aaPredicted RBP4.72□□□□□ -1.65
CBX3-208ENST00000497498 INTS13Q9NVM9 706 aa4.72□□□□□ -1.65
CBX3-208ENST00000497498 ARPP21Q9UBL0 812 aaPredicted RBP4.72□□□□□ -1.65
CBX3-208ENST00000497498 CCDC151A5D8V7 595 aa4.71□□□□□ -1.66
CBX3-208ENST00000497498 MPPED1O15442 326 aa4.71□□□□□ -1.66
CBX3-208ENST00000497498 MTHFD1P11586 935 aaKnown RBP4.71□□□□□ -1.66
CBX3-208ENST00000497498 KCNA2P16389 499 aa4.71□□□□□ -1.66
CBX3-208ENST00000497498 WT1P19544 449 aaPredicted RBP4.71□□□□□ -1.66
CBX3-208ENST00000497498 CNGA1P29973 690 aa4.71□□□□□ -1.66
CBX3-208ENST00000497498 ATXN1P54253 815 aaKnown RBP4.71□□□□□ -1.66
CBX3-208ENST00000497498 CDC42EP1Q00587 391 aa4.71□□□□□ -1.66
CBX3-208ENST00000497498 PABPC1LQ4VXU2 614 aaKnown RBP4.71□□□□□ -1.66
CBX3-208ENST00000497498 CLNKQ7Z7G1 428 aa4.71□□□□□ -1.66
CBX3-208ENST00000497498 PPM1NQ8N819 430 aa4.71□□□□□ -1.66
CBX3-208ENST00000497498 IL17RDQ8NFM7 739 aa4.71□□□□□ -1.66
CBX3-208ENST00000497498 IFI44Q8TCB0 444 aa4.71□□□□□ -1.66
CBX3-208ENST00000497498 UROC1Q96N76 676 aa4.71□□□□□ -1.66
CBX3-208ENST00000497498 TLR10Q9BXR5 811 aa4.71□□□□□ -1.66
CBX3-208ENST00000497498 TMX1Q9H3N1 280 aa4.71□□□□□ -1.66
CBX3-208ENST00000497498 CTTNBP2NLQ9P2B4 639 aa4.71□□□□□ -1.66
CBX3-208ENST00000497498 NEU2Q9Y3R4 380 aa4.71□□□□□ -1.66
CBX3-208ENST00000497498 PRKAB1Q9Y478 270 aa4.71□□□□□ -1.66
CBX3-208ENST00000497498 ENTPD2Q9Y5L3 495 aa4.71□□□□□ -1.66
CBX3-208ENST00000497498 COL3A1P02461 1466 aaPredicted RBP4.7□□□□□ -1.66
CBX3-208ENST00000497498 GRM6O15303 877 aa4.7□□□□□ -1.66
CBX3-208ENST00000497498 CLSTN1O94985 981 aa4.7□□□□□ -1.66
CBX3-208ENST00000497498 AGFG2O95081 481 aa4.7□□□□□ -1.66
CBX3-208ENST00000497498 SBK3P0C264 359 aa4.7□□□□□ -1.66
CBX3-208ENST00000497498 GATA3P23771 443 aa4.7□□□□□ -1.66
CBX3-208ENST00000497498 RPS7P62081 194 aaKnown RBP4.7□□□□□ -1.66
CBX3-208ENST00000497498 NBPF8Q3BBV2 869 aa4.7□□□□□ -1.66
CBX3-208ENST00000497498 PAPD7Q5XG87 772 aaKnown RBP4.7□□□□□ -1.66
CBX3-208ENST00000497498 KAZNQ674X7 775 aa4.7□□□□□ -1.66
CBX3-208ENST00000497498 GRASPQ7Z6J2 395 aaPredicted RBP4.7□□□□□ -1.66
CBX3-208ENST00000497498 CBARPQ8N350 705 aaPredicted RBP4.7□□□□□ -1.66
CBX3-208ENST00000497498 ATL2Q8NHH9 583 aa4.7□□□□□ -1.66
CBX3-208ENST00000497498 PUS7LQ9H0K6 701 aaKnown RBP4.7□□□□□ -1.66
CBX3-208ENST00000497498 IL17RBQ9NRM6 502 aa4.7□□□□□ -1.66
CBX3-208ENST00000497498 TDP1Q9NUW8 608 aa4.7□□□□□ -1.66
CBX3-208ENST00000497498 ASB6Q9NWX5 421 aa4.7□□□□□ -1.66
CBX3-208ENST00000497498 SAP30BPQ9UHR5 308 aaKnown RBP4.7□□□□□ -1.66
CBX3-208ENST00000497498 TUBD1Q9UJT1 453 aa4.7□□□□□ -1.66
CBX3-208ENST00000497498 SGTAO43765 313 aa4.69□□□□□ -1.66
CBX3-208ENST00000497498 NDUFS2O75306 463 aa4.69□□□□□ -1.66
CBX3-208ENST00000497498 SLC43A1O75387 559 aa4.69□□□□□ -1.66
CBX3-208ENST00000497498 MAPK10P53779 464 aa4.69□□□□□ -1.66
CBX3-208ENST00000497498 PROK1P58294 105 aa4.69□□□□□ -1.66
CBX3-208ENST00000497498 DYRK1AQ13627 763 aa4.69□□□□□ -1.66
CBX3-208ENST00000497498 PTPRRQ15256 657 aa4.69□□□□□ -1.66
CBX3-208ENST00000497498 UTP14CQ5TAP6 766 aaKnown RBP4.69□□□□□ -1.66
CBX3-208ENST00000497498 MIGA2Q7L4E1 593 aa4.69□□□□□ -1.66
CBX3-208ENST00000497498 TMPRSS9Q7Z410 1059 aa4.69□□□□□ -1.66
CBX3-208ENST00000497498 RSPH3Q86UC2 560 aa4.69□□□□□ -1.66
CBX3-208ENST00000497498 GLCCI1Q86VQ1 547 aa4.69□□□□□ -1.66
CBX3-208ENST00000497498 SH2D3CQ8N5H7 860 aa4.69□□□□□ -1.66
CBX3-208ENST00000497498 CNTD1Q8N815 330 aa4.69□□□□□ -1.66
CBX3-208ENST00000497498 SLC30A5Q8TAD4 765 aa4.69□□□□□ -1.66
CBX3-208ENST00000497498 JADE3Q92613 823 aa4.69□□□□□ -1.66
CBX3-208ENST00000497498 TMEM125Q96AQ2 219 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms