RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 OR6B3Q8NGW1 331 aa6.81□□□□□ -1.32
BRCA1-224ENST00000497488 ZNF384Q8TF68 577 aa6.81□□□□□ -1.32
BRCA1-224ENST00000497488 FBLIM1Q8WUP2 373 aa6.81□□□□□ -1.32
BRCA1-224ENST00000497488 HOXB13Q92826 284 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-224ENST00000497488 SDCCAG3Q96C92 435 aa6.81□□□□□ -1.32
BRCA1-224ENST00000497488 MYCBPQ99417 103 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-224ENST00000497488 COL25A1Q9BXS0 654 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-224ENST00000497488 MAGEB5Q9BZ81 275 aa6.81□□□□□ -1.32
BRCA1-224ENST00000497488 OSBPL6Q9BZF3 934 aa6.81□□□□□ -1.32
BRCA1-224ENST00000497488 PABPC3Q9H361 631 aaKnown RBP6.81□□□□□ -1.32
BRCA1-224ENST00000497488 SEMA6BQ9H3T3 888 aa6.81□□□□□ -1.32
BRCA1-224ENST00000497488 RNPEPQ9H4A4 650 aa6.81□□□□□ -1.32
BRCA1-224ENST00000497488 ZWILCHQ9H900 591 aa6.81□□□□□ -1.32
BRCA1-224ENST00000497488 SMURF2Q9HAU4 748 aa6.81□□□□□ -1.32
BRCA1-224ENST00000497488 C1GALT1Q9NS00 363 aa6.81□□□□□ -1.32
BRCA1-224ENST00000497488 ABCF3Q9NUQ8 709 aa6.81□□□□□ -1.32
BRCA1-224ENST00000497488 ADD3Q9UEY8 706 aaKnown RBP6.81□□□□□ -1.32
BRCA1-224ENST00000497488 ZNF711Q9Y462 761 aa6.81□□□□□ -1.32
BRCA1-224ENST00000497488 ACOT7O00154 380 aa6.8□□□□□ -1.32
BRCA1-224ENST00000497488 GAS2O43903 313 aaKnown RBP6.8□□□□□ -1.32
BRCA1-224ENST00000497488 OPHN1O60890 802 aa6.8□□□□□ -1.32
BRCA1-224ENST00000497488 ACTL6BO94805 426 aa6.8□□□□□ -1.32
BRCA1-224ENST00000497488 SOGA1O94964 1423 aa6.8□□□□□ -1.32
BRCA1-224ENST00000497488 FTH1P19P0C7X4 201 aa6.8□□□□□ -1.32
BRCA1-224ENST00000497488 GYS1P13807 737 aa6.8□□□□□ -1.32
BRCA1-224ENST00000497488 IDEP14735 1019 aa6.8□□□□□ -1.32
BRCA1-224ENST00000497488 IL1R1P14778 569 aa6.8□□□□□ -1.32
BRCA1-224ENST00000497488 SYN1P17600 705 aa6.8□□□□□ -1.32
BRCA1-224ENST00000497488 CARSP49589 748 aaKnown RBP6.8□□□□□ -1.32
BRCA1-224ENST00000497488 SESN2P58004 480 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-224ENST00000497488 TLE1Q04724 770 aa6.8□□□□□ -1.32
BRCA1-224ENST00000497488 DCTN1Q14203 1278 aa6.8□□□□□ -1.32
BRCA1-224ENST00000497488 SNX30Q5VWJ9 437 aa6.8□□□□□ -1.32
BRCA1-224ENST00000497488 HLA-DQA1Q5Y7H0 255 aa6.8□□□□□ -1.32
BRCA1-224ENST00000497488 NFRKBQ6P4R8 1299 aa6.8□□□□□ -1.32
BRCA1-224ENST00000497488 C1orf229Q6ZS94 237 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-224ENST00000497488 CCDC117Q8IWD4 279 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-224ENST00000497488 GPR156Q8NFN8 814 aa6.8□□□□□ -1.32
BRCA1-224ENST00000497488 CEP70Q8NHQ1 597 aa6.8□□□□□ -1.32
BRCA1-224ENST00000497488 SECISBP2LQ93073 1101 aaKnown RBP6.8□□□□□ -1.32
BRCA1-224ENST00000497488 PITHD1Q9GZP4 211 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-224ENST00000497488 TWSG1Q9GZX9 223 aa6.8□□□□□ -1.32
BRCA1-224ENST00000497488 MRPL18Q9H0U6 180 aaKnown RBP6.8□□□□□ -1.32
BRCA1-224ENST00000497488 PRDM8Q9NQV8 689 aa6.8□□□□□ -1.32
BRCA1-224ENST00000497488 BTBD7Q9P203 1132 aa6.8□□□□□ -1.32
BRCA1-224ENST00000497488 ASH2LQ9UBL3 628 aa6.8□□□□□ -1.32
BRCA1-224ENST00000497488 TBX20Q9UMR3 447 aa6.8□□□□□ -1.32
BRCA1-224ENST00000497488 HS3ST4Q9Y661 456 aa6.8□□□□□ -1.32
BRCA1-224ENST00000497488 IGF1RP08069 1367 aa6.8□□□□□ -1.32
BRCA1-224ENST00000497488 SOS1Q07889 1333 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-224ENST00000497488 SYNJ1O43426 1573 aa6.79□□□□□ -1.32
BRCA1-224ENST00000497488 NT5C1B-RDH14C9J2C7 533 aa6.79□□□□□ -1.32
BRCA1-224ENST00000497488 FCHO1O14526 889 aa6.79□□□□□ -1.32
BRCA1-224ENST00000497488 SPTLC2O15270 562 aa6.79□□□□□ -1.32
BRCA1-224ENST00000497488 MLYCDO95822 493 aa6.79□□□□□ -1.32
BRCA1-224ENST00000497488 SCGB1D1O95968 90 aa6.79□□□□□ -1.32
BRCA1-224ENST00000497488 CSF1P09603 554 aa6.79□□□□□ -1.32
BRCA1-224ENST00000497488 RXRAP19793 462 aa6.79□□□□□ -1.32
BRCA1-224ENST00000497488 MAPK4P31152 587 aa6.79□□□□□ -1.32
BRCA1-224ENST00000497488 SLC6A9P48067 706 aa6.79□□□□□ -1.32
BRCA1-224ENST00000497488 AARSP49588 968 aaKnown RBP eCLIP6.79□□□□□ -1.32
BRCA1-224ENST00000497488 COPAP53621 1224 aa6.79□□□□□ -1.32
BRCA1-224ENST00000497488 IFI35P80217 286 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-224ENST00000497488 CALD1Q05682 793 aaKnown RBP6.79□□□□□ -1.32
BRCA1-224ENST00000497488 ACVR2BQ13705 512 aa6.79□□□□□ -1.32
BRCA1-224ENST00000497488 EIF4A2Q14240 407 aaKnown RBP6.79□□□□□ -1.32
BRCA1-224ENST00000497488 NOLC1Q14978 699 aaKnown RBP eCLIP6.79□□□□□ -1.32
BRCA1-224ENST00000497488 RASA2Q15283 850 aa6.79□□□□□ -1.32
BRCA1-224ENST00000497488 MAN2A1Q16706 1144 aa6.79□□□□□ -1.32
BRCA1-224ENST00000497488 FLYWCH1Q4VC44 716 aa6.79□□□□□ -1.32
BRCA1-224ENST00000497488 TRAPPC3LQ5T215 181 aa6.79□□□□□ -1.32
BRCA1-224ENST00000497488 ZNF449Q6P9G9 518 aa6.79□□□□□ -1.32
BRCA1-224ENST00000497488 ZNF783Q6ZMS7 281 aa6.79□□□□□ -1.32
BRCA1-224ENST00000497488 CREG2Q8IUH2 290 aa6.79□□□□□ -1.32
BRCA1-224ENST00000497488 AGGF1Q8N302 714 aaeCLIP6.79□□□□□ -1.32
BRCA1-224ENST00000497488 CCDC150Q8NCX0 1101 aa6.79□□□□□ -1.32
BRCA1-224ENST00000497488 MSANTD4Q8NCY6 345 aa6.79□□□□□ -1.32
BRCA1-224ENST00000497488 IFI44Q8TCB0 444 aa6.79□□□□□ -1.32
BRCA1-224ENST00000497488 PHOSPHO1Q8TCT1 267 aa6.79□□□□□ -1.32
BRCA1-224ENST00000497488 CLEC4DQ8WXI8 215 aa6.79□□□□□ -1.32
BRCA1-224ENST00000497488 SNX21Q969T3 373 aa6.79□□□□□ -1.32
BRCA1-224ENST00000497488 HIC2Q96JB3 615 aa6.79□□□□□ -1.32
BRCA1-224ENST00000497488 SPATA17Q96L03 361 aa6.79□□□□□ -1.32
BRCA1-224ENST00000497488 SNX27Q96L92 541 aa6.79□□□□□ -1.32
BRCA1-224ENST00000497488 HEXIM2Q96MH2 286 aaKnown RBP6.79□□□□□ -1.32
BRCA1-224ENST00000497488 YME1L1Q96TA2 773 aa6.79□□□□□ -1.32
BRCA1-224ENST00000497488 XPO4Q9C0E2 1151 aaKnown RBP6.79□□□□□ -1.32
BRCA1-224ENST00000497488 MRPL46Q9H2W6 279 aaKnown RBP6.79□□□□□ -1.32
BRCA1-224ENST00000497488 TAF1DQ9H5J8 278 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-224ENST00000497488 INCENPQ9NQS7 918 aa6.79□□□□□ -1.32
BRCA1-224ENST00000497488 MYOTQ9UBF9 498 aa6.79□□□□□ -1.32
BRCA1-224ENST00000497488 ODF2LQ9ULJ1 636 aa6.79□□□□□ -1.32
BRCA1-224ENST00000497488 RWDD3Q9Y3V2 267 aa6.79□□□□□ -1.32
BRCA1-224ENST00000497488 CYP46A1Q9Y6A2 500 aa6.79□□□□□ -1.32
BRCA1-224ENST00000497488 A0A0A0MRY4 1105 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 hCG_1807616A0A1W2PRN6 198 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 WASH4PA8MWX3 477 aa6.78□□□□□ -1.32
BRCA1-224ENST00000497488 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-224ENST00000497488 IGF2BP3O00425 579 aaKnown RBP eCLIP6.78□□□□□ -1.32
BRCA1-224ENST00000497488 BTN3A1O00481 513 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms