RNA–Protein interactions for RNA: ENST00000496962.1

GGCX-210, Transcript of gamma-glutamyl carboxylase, humanhuman

TSL 2

Gene GGCX, Length 684 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGCX-210ENST00000496962 VPS16Q9H269 839 aa14.09□□□□□ -0.15
GGCX-210ENST00000496962 CXCL16Q9H2A7 254 aa14.09□□□□□ -0.15
GGCX-210ENST00000496962 VRTNQ9H8Y1 702 aa14.09□□□□□ -0.15
GGCX-210ENST00000496962 RAB20Q9NX57 234 aa14.09□□□□□ -0.15
GGCX-210ENST00000496962 TAB2Q9NYJ8 693 aa14.09□□□□□ -0.15
GGCX-210ENST00000496962 TUBGCP4Q9UGJ1 667 aa14.09□□□□□ -0.15
GGCX-210ENST00000496962 AGAP1Q9UPQ3 857 aa14.09□□□□□ -0.15
GGCX-210ENST00000496962 TDRD15B5MCY1 1934 aaKnown RBP14.09□□□□□ -0.15
GGCX-210ENST00000496962 PTPRJQ12913 1337 aa14.09□□□□□ -0.15
GGCX-210ENST00000496962 PDCD11Q14690 1871 aaKnown RBP14.08□□□□□ -0.16
GGCX-210ENST00000496962 CASTOR2A6NHX0 329 aa14.08□□□□□ -0.16
GGCX-210ENST00000496962 LGALS16A8MUM7 142 aa14.08□□□□□ -0.16
GGCX-210ENST00000496962 NRP1O14786 923 aa14.08□□□□□ -0.16
GGCX-210ENST00000496962 KRT19P08727 400 aa14.08□□□□□ -0.16
GGCX-210ENST00000496962 FAM163BP0C2L3 166 aa14.08□□□□□ -0.16
GGCX-210ENST00000496962 P4HA1P13674 534 aa14.08□□□□□ -0.16
GGCX-210ENST00000496962 PIK3CAP42336 1068 aa14.08□□□□□ -0.16
GGCX-210ENST00000496962 TAF6P49848 677 aa14.08□□□□□ -0.16
GGCX-210ENST00000496962 CLCNKBP51801 687 aa14.08□□□□□ -0.16
GGCX-210ENST00000496962 BCAR1P56945 870 aa14.08□□□□□ -0.16
GGCX-210ENST00000496962 UBASH3AP57075 661 aa14.08□□□□□ -0.16
GGCX-210ENST00000496962 SOX4Q06945 474 aaPredicted RBP14.08□□□□□ -0.16
GGCX-210ENST00000496962 LRIT3Q3SXY7 679 aa14.08□□□□□ -0.16
GGCX-210ENST00000496962 SV2CQ496J9 727 aa14.08□□□□□ -0.16
GGCX-210ENST00000496962 CBWD6Q4V339 395 aa14.08□□□□□ -0.16
GGCX-210ENST00000496962 CBWD3Q5JTY5 395 aa14.08□□□□□ -0.16
GGCX-210ENST00000496962 MIIPQ5JXC2 388 aa14.08□□□□□ -0.16
GGCX-210ENST00000496962 CBWD5Q5RIA9 395 aa14.08□□□□□ -0.16
GGCX-210ENST00000496962 KCNT2Q6UVM3 1135 aa14.08□□□□□ -0.16
GGCX-210ENST00000496962 MMRN2Q9H8L6 949 aa14.08□□□□□ -0.16
GGCX-210ENST00000496962 SPG21Q9NZD8 308 aa14.08□□□□□ -0.16
GGCX-210ENST00000496962 SIX4Q9UIU6 781 aa14.08□□□□□ -0.16
GGCX-210ENST00000496962 DAAM1Q9Y4D1 1078 aa14.08□□□□□ -0.16
GGCX-210ENST00000496962 NUB1Q9Y5A7 615 aa14.08□□□□□ -0.16
GGCX-210ENST00000496962 MRPL42Q9Y6G3 142 aaKnown RBP14.08□□□□□ -0.16
GGCX-210ENST00000496962 A0A1B0GTH6 734 aa14.07□□□□□ -0.16
GGCX-210ENST00000496962 RBAK-RBAKDNI3L0D1 243 aa14.07□□□□□ -0.16
GGCX-210ENST00000496962 TADA2AO75478 443 aa14.07□□□□□ -0.16
GGCX-210ENST00000496962 B3GAT3O94766 335 aa14.07□□□□□ -0.16
GGCX-210ENST00000496962 CST3P01034 146 aaPredicted RBP14.07□□□□□ -0.16
GGCX-210ENST00000496962 HLA-DRAP01903 254 aa14.07□□□□□ -0.16
GGCX-210ENST00000496962 POLR2BP30876 1174 aaKnown RBP14.07□□□□□ -0.16
GGCX-210ENST00000496962 BMPR1AP36894 532 aa14.07□□□□□ -0.16
GGCX-210ENST00000496962 SLC11A1P49279 550 aa14.07□□□□□ -0.16
GGCX-210ENST00000496962 KRT17Q04695 432 aa14.07□□□□□ -0.16
GGCX-210ENST00000496962 EXOC3L4Q17RC7 722 aa14.07□□□□□ -0.16
GGCX-210ENST00000496962 EPC2Q52LR7 807 aa14.07□□□□□ -0.16
GGCX-210ENST00000496962 SARM1Q6SZW1 724 aa14.07□□□□□ -0.16
GGCX-210ENST00000496962 APTXQ7Z2E3 356 aaKnown RBP14.07□□□□□ -0.16
GGCX-210ENST00000496962 COLGALT1Q8NBJ5 622 aa14.07□□□□□ -0.16
GGCX-210ENST00000496962 EHBP1Q8NDI1 1231 aa14.07□□□□□ -0.16
GGCX-210ENST00000496962 CXorf38Q8TB03 319 aa14.07□□□□□ -0.16
GGCX-210ENST00000496962 HPDLQ96IR7 371 aa14.07□□□□□ -0.16
GGCX-210ENST00000496962 TGS1Q96RS0 853 aaKnown RBP14.07□□□□□ -0.16
GGCX-210ENST00000496962 FAM124BQ9H5Z6 455 aaPredicted RBP14.07□□□□□ -0.16
GGCX-210ENST00000496962 GOLGA2P5Q9HBQ8 144 aa14.07□□□□□ -0.16
GGCX-210ENST00000496962 RTN4Q9NQC3 1192 aaKnown RBP14.07□□□□□ -0.16
GGCX-210ENST00000496962 DNAJB4Q9UDY4 337 aa14.07□□□□□ -0.16
GGCX-210ENST00000496962 ADAM28Q9UKQ2 775 aa14.07□□□□□ -0.16
GGCX-210ENST00000496962 PTPRSQ13332 1948 aa14.07□□□□□ -0.16
GGCX-210ENST00000496962 LINC01553A4QN01 128 aa14.06□□□□□ -0.16
GGCX-210ENST00000496962 KPNA7A9QM74 516 aa14.06□□□□□ -0.16
GGCX-210ENST00000496962 VNN1O95497 513 aa14.06□□□□□ -0.16
GGCX-210ENST00000496962 ASS1P00966 412 aaKnown RBP14.06□□□□□ -0.16
GGCX-210ENST00000496962 RABGGTBP53611 331 aa14.06□□□□□ -0.16
GGCX-210ENST00000496962 LILRA4P59901 499 aa14.06□□□□□ -0.16
GGCX-210ENST00000496962 PLCB3Q01970 1234 aa14.06□□□□□ -0.16
GGCX-210ENST00000496962 UBXN1Q04323 297 aa14.06□□□□□ -0.16
GGCX-210ENST00000496962 ZNF699Q32M78 642 aa14.06□□□□□ -0.16
GGCX-210ENST00000496962 DPH6Q7L8W6 267 aa14.06□□□□□ -0.16
GGCX-210ENST00000496962 SLC39A11Q8N1S5 342 aa14.06□□□□□ -0.16
GGCX-210ENST00000496962 TTC39CQ8N584 583 aa14.06□□□□□ -0.16
GGCX-210ENST00000496962 SPATA18Q8TC71 538 aa14.06□□□□□ -0.16
GGCX-210ENST00000496962 TAS1R2Q8TE23 839 aa14.06□□□□□ -0.16
GGCX-210ENST00000496962 TMEM169Q96HH4 297 aa14.06□□□□□ -0.16
GGCX-210ENST00000496962 IGSF21Q96ID5 467 aa14.06□□□□□ -0.16
GGCX-210ENST00000496962 ERGIC2Q96RQ1 377 aa14.06□□□□□ -0.16
GGCX-210ENST00000496962 PBX4Q9BYU1 374 aa14.06□□□□□ -0.16
GGCX-210ENST00000496962 SLC28A3Q9HAS3 691 aa14.06□□□□□ -0.16
GGCX-210ENST00000496962 GDAP2Q9NXN4 497 aa14.06□□□□□ -0.16
GGCX-210ENST00000496962 PUF60Q9UHX1 559 aaKnown RBP14.06□□□□□ -0.16
GGCX-210ENST00000496962 DSEQ9UL01 958 aa14.06□□□□□ -0.16
GGCX-210ENST00000496962 PRG3Q9Y2Y8 225 aaPredicted RBP14.06□□□□□ -0.16
GGCX-210ENST00000496962 SF3B1O75533 1304 aaKnown RBP eCLIP14.06□□□□□ -0.163e-6■■■■■ 137.9
GGCX-210ENST00000496962 TMEM265A0A087WTH1 108 aa14.05□□□□□ -0.16
GGCX-210ENST00000496962 A0A1W2PQC6 194 aa14.05□□□□□ -0.16
GGCX-210ENST00000496962 GOLGA6L3A6NEY3 463 aa14.05□□□□□ -0.16
GGCX-210ENST00000496962 GRXCR1A8MXD5 290 aa14.05□□□□□ -0.16
GGCX-210ENST00000496962 C5orf67F2Z3F1 127 aa14.05□□□□□ -0.16
GGCX-210ENST00000496962 CA3P07451 260 aa14.05□□□□□ -0.16
GGCX-210ENST00000496962 RFX1P22670 979 aa14.05□□□□□ -0.16
GGCX-210ENST00000496962 AARSP49588 968 aaKnown RBP eCLIP14.05□□□□□ -0.16
GGCX-210ENST00000496962 GUCY2FP51841 1108 aa14.05□□□□□ -0.16
GGCX-210ENST00000496962 MYL6P60660 151 aa14.05□□□□□ -0.16
GGCX-210ENST00000496962 ERVK-21P61565 698 aa14.05□□□□□ -0.16
GGCX-210ENST00000496962 TNNC1P63316 161 aa14.05□□□□□ -0.16
GGCX-210ENST00000496962 UBE3AQ05086 875 aa14.05□□□□□ -0.16
GGCX-210ENST00000496962 BMS1Q14692 1282 aaKnown RBP14.05□□□□□ -0.16
GGCX-210ENST00000496962 NR1I3Q14994 352 aa14.05□□□□□ -0.16
GGCX-210ENST00000496962 ZNF667Q5HYK9 610 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms