RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 SIX2Q9NPC8 291 aa19.67■□□□□ 0.74
RGP1-202ENST00000496906 PLCB1Q9NQ66 1216 aa19.67■□□□□ 0.74
RGP1-202ENST00000496906 CACNG4Q9UBN1 327 aa19.67■□□□□ 0.74
RGP1-202ENST00000496906 FNDC1Q4ZHG4 1894 aaPredicted RBP19.67■□□□□ 0.74
RGP1-202ENST00000496906 H0YGN5 161 aa19.66■□□□□ 0.74
RGP1-202ENST00000496906 ZC3H11AO75152 810 aaKnown RBP eCLIP19.66■□□□□ 0.74
RGP1-202ENST00000496906 ATICP31939 592 aa19.66■□□□□ 0.74
RGP1-202ENST00000496906 RPL9P32969 192 aaKnown RBP19.66■□□□□ 0.74
RGP1-202ENST00000496906 APBA1Q02410 837 aa19.66■□□□□ 0.74
RGP1-202ENST00000496906 SGSM1Q2NKQ1 1148 aa19.66■□□□□ 0.74
RGP1-202ENST00000496906 PAN2Q504Q3 1202 aaKnown RBP19.66■□□□□ 0.74
RGP1-202ENST00000496906 SPECC1LQ69YQ0 1117 aa19.66■□□□□ 0.74
RGP1-202ENST00000496906 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.66■□□□□ 0.74
RGP1-202ENST00000496906 LRRC52Q8N7C0 313 aa19.66■□□□□ 0.74
RGP1-202ENST00000496906 ELMO3Q96BJ8 720 aa19.66■□□□□ 0.74
RGP1-202ENST00000496906 UROC1Q96N76 676 aa19.66■□□□□ 0.74
RGP1-202ENST00000496906 GDF15Q99988 308 aa19.66■□□□□ 0.74
RGP1-202ENST00000496906 PAAF1Q9BRP4 392 aa19.66■□□□□ 0.74
RGP1-202ENST00000496906 IMPG2Q9BZV3 1241 aa19.66■□□□□ 0.74
RGP1-202ENST00000496906 VRTNQ9H8Y1 702 aa19.66■□□□□ 0.74
RGP1-202ENST00000496906 FAM207AQ9NSI2 230 aaPredicted RBP19.66■□□□□ 0.74
RGP1-202ENST00000496906 HCSTQ9UBK5 93 aa19.66■□□□□ 0.74
RGP1-202ENST00000496906 PODXLO00592 558 aa19.66■□□□□ 0.74
RGP1-202ENST00000496906 EPHB6O15197 1021 aa19.66■□□□□ 0.74
RGP1-202ENST00000496906 STAU1O95793 577 aaKnown RBP19.66■□□□□ 0.74
RGP1-202ENST00000496906 ATP2A2P16615 1042 aaKnown RBP19.66■□□□□ 0.74
RGP1-202ENST00000496906 CLCNKBP51801 687 aa19.66■□□□□ 0.74
RGP1-202ENST00000496906 NOP14P78316 857 aaKnown RBP19.66■□□□□ 0.74
RGP1-202ENST00000496906 HTRA4P83105 476 aaPredicted RBP19.66■□□□□ 0.74
RGP1-202ENST00000496906 UPP1Q16831 310 aa19.66■□□□□ 0.74
RGP1-202ENST00000496906 ZNF699Q32M78 642 aa19.66■□□□□ 0.74
RGP1-202ENST00000496906 WDR44Q5JSH3 913 aa19.66■□□□□ 0.74
RGP1-202ENST00000496906 SPOPLQ6IQ16 392 aa19.66■□□□□ 0.74
RGP1-202ENST00000496906 CMTR2Q8IYT2 770 aaKnown RBP19.66■□□□□ 0.74
RGP1-202ENST00000496906 TAF4BQ92750 862 aa19.66■□□□□ 0.74
RGP1-202ENST00000496906 NT5C1BQ96P26 610 aa19.66■□□□□ 0.74
RGP1-202ENST00000496906 FAM193BQ96PV7 902 aaPredicted RBP19.66■□□□□ 0.74
RGP1-202ENST00000496906 GANQ9H2C0 597 aa19.66■□□□□ 0.74
RGP1-202ENST00000496906 NRDE2Q9H7Z3 1164 aa19.66■□□□□ 0.74
RGP1-202ENST00000496906 APOBEC3GQ9HC16 384 aaKnown RBP19.66■□□□□ 0.74
RGP1-202ENST00000496906 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.66■□□□□ 0.742e-7■■■■■ 155.3
RGP1-202ENST00000496906 APEX2Q9UBZ4 518 aa19.66■□□□□ 0.74
RGP1-202ENST00000496906 R3HCC1Q9Y3T6 440 aaKnown RBP19.66■□□□□ 0.74
RGP1-202ENST00000496906 NOL4O94818 638 aa19.65■□□□□ 0.74
RGP1-202ENST00000496906 LRMPQ12912 555 aa19.65■□□□□ 0.74
RGP1-202ENST00000496906 SHHQ15465 462 aa19.65■□□□□ 0.74
RGP1-202ENST00000496906 KLHDC7AQ5VTJ3 777 aa19.65■□□□□ 0.74
RGP1-202ENST00000496906 PHLDB3Q6NSJ2 640 aa19.65■□□□□ 0.74
RGP1-202ENST00000496906 TMC6Q7Z403 805 aa19.65■□□□□ 0.74
RGP1-202ENST00000496906 HERC6Q8IVU3 1022 aa19.65■□□□□ 0.74
RGP1-202ENST00000496906 CCDC150Q8NCX0 1101 aa19.65■□□□□ 0.74
RGP1-202ENST00000496906 NEK11Q8NG66 645 aa19.65■□□□□ 0.74
RGP1-202ENST00000496906 ANP32BQ92688 251 aaKnown RBP19.65■□□□□ 0.74
RGP1-202ENST00000496906 DDX27Q96GQ7 796 aaKnown RBP19.65■□□□□ 0.74
RGP1-202ENST00000496906 HPDLQ96IR7 371 aa19.65■□□□□ 0.74
RGP1-202ENST00000496906 ZNF560Q96MR9 790 aa19.65■□□□□ 0.74
RGP1-202ENST00000496906 YME1L1Q96TA2 773 aa19.65■□□□□ 0.74
RGP1-202ENST00000496906 TTYH3Q9C0H2 523 aa19.65■□□□□ 0.74
RGP1-202ENST00000496906 DNAJB4Q9UDY4 337 aa19.65■□□□□ 0.74
RGP1-202ENST00000496906 TRIM21P19474 475 aaKnown RBP19.64■□□□□ 0.73
RGP1-202ENST00000496906 PNPLA4P41247 253 aa19.64■□□□□ 0.73
RGP1-202ENST00000496906 MYO1EQ12965 1108 aa19.64■□□□□ 0.73
RGP1-202ENST00000496906 FIGNQ5HY92 759 aa19.64■□□□□ 0.73
RGP1-202ENST00000496906 ARHGEF19Q8IW93 802 aa19.64■□□□□ 0.73
RGP1-202ENST00000496906 C3orf58Q8NDZ4 430 aa19.64■□□□□ 0.73
RGP1-202ENST00000496906 TATDN2Q93075 761 aa19.64■□□□□ 0.73
RGP1-202ENST00000496906 RNPC3Q96LT9 517 aaKnown RBP19.64■□□□□ 0.73
RGP1-202ENST00000496906 UBE2OQ9C0C9 1292 aaKnown RBP19.64■□□□□ 0.73
RGP1-202ENST00000496906 NUB1Q9Y5A7 615 aa19.64■□□□□ 0.73
RGP1-202ENST00000496906 UCHL3P15374 230 aa19.63■□□□□ 0.73
RGP1-202ENST00000496906 IGFBP6P24592 240 aaPredicted RBP19.63■□□□□ 0.73
RGP1-202ENST00000496906 TAF6P49848 677 aa19.63■□□□□ 0.73
RGP1-202ENST00000496906 BTG3Q14201 252 aaPredicted RBP19.63■□□□□ 0.73
RGP1-202ENST00000496906 GJB7Q6PEY0 223 aa19.63■□□□□ 0.73
RGP1-202ENST00000496906 RABGGTAQ92696 567 aa19.63■□□□□ 0.73
RGP1-202ENST00000496906 TMEM175Q9BSA9 504 aa19.63■□□□□ 0.73
RGP1-202ENST00000496906 NUP58Q9BVL2 599 aa19.63■□□□□ 0.73
RGP1-202ENST00000496906 CWH43Q9H720 699 aa19.63■□□□□ 0.73
RGP1-202ENST00000496906 FBXL5Q9UKA1 691 aa19.63■□□□□ 0.73
RGP1-202ENST00000496906 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.63■□□□□ 0.73
RGP1-202ENST00000496906 SCN1AP35498 2009 aa19.62■□□□□ 0.73
RGP1-202ENST00000496906 SPTLC1O15269 473 aa19.62■□□□□ 0.73
RGP1-202ENST00000496906 CLSTN1O94985 981 aa19.62■□□□□ 0.73
RGP1-202ENST00000496906 RFX1P22670 979 aa19.62■□□□□ 0.73
RGP1-202ENST00000496906 OR1G1P47890 313 aa19.62■□□□□ 0.73
RGP1-202ENST00000496906 LILRA4P59901 499 aa19.62■□□□□ 0.73
RGP1-202ENST00000496906 WDR72Q3MJ13 1102 aa19.62■□□□□ 0.73
RGP1-202ENST00000496906 ZNF667Q5HYK9 610 aa19.62■□□□□ 0.73
RGP1-202ENST00000496906 PPM1KQ8N3J5 372 aa19.62■□□□□ 0.73
RGP1-202ENST00000496906 IQCDQ96DY2 449 aa19.62■□□□□ 0.73
RGP1-202ENST00000496906 ZBED2Q9BTP6 218 aa19.62■□□□□ 0.73
RGP1-202ENST00000496906 NAA15Q9BXJ9 866 aaKnown RBP19.62■□□□□ 0.73
RGP1-202ENST00000496906 NIF3L1Q9GZT8 377 aa19.62■□□□□ 0.73
RGP1-202ENST00000496906 AJAP1Q9UKB5 411 aaPredicted RBP19.62■□□□□ 0.73
RGP1-202ENST00000496906 INSL6Q9Y581 213 aa19.62■□□□□ 0.73
RGP1-202ENST00000496906 FHOD1Q9Y613 1164 aa19.62■□□□□ 0.73
RGP1-202ENST00000496906 TMEM189-UBE2V1I3L0A0 370 aa19.61■□□□□ 0.73
RGP1-202ENST00000496906 B3GAT3O94766 335 aa19.61■□□□□ 0.73
RGP1-202ENST00000496906 GYPCP04921 128 aa19.61■□□□□ 0.73
RGP1-202ENST00000496906 SLC11A1P49279 550 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms