RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 SCN1AP35498 2009 aa15.55■□□□□ 0.08
VTI1A-209ENST00000496445 A0A087X0B3 334 aa15.54■□□□□ 0.08
VTI1A-209ENST00000496445 MYMKA6NI61 221 aa15.54■□□□□ 0.08
VTI1A-209ENST00000496445 ANKRD63C9JTQ0 380 aa15.54■□□□□ 0.08
VTI1A-209ENST00000496445 PPEF2O14830 753 aa15.54■□□□□ 0.08
VTI1A-209ENST00000496445 CFHP08603 1231 aa15.54■□□□□ 0.08
VTI1A-209ENST00000496445 CYP3A5P20815 502 aa15.54■□□□□ 0.08
VTI1A-209ENST00000496445 AARSP49588 968 aaKnown RBP eCLIP15.54■□□□□ 0.08
VTI1A-209ENST00000496445 MRE11P49959 708 aa15.54■□□□□ 0.08
VTI1A-209ENST00000496445 ASTLQ6HA08 431 aaPredicted RBP15.54■□□□□ 0.08
VTI1A-209ENST00000496445 SFR1Q86XK3 245 aa15.54■□□□□ 0.08
VTI1A-209ENST00000496445 SIX5Q8N196 739 aa15.54■□□□□ 0.08
VTI1A-209ENST00000496445 ZNF461Q8TAF7 563 aa15.54■□□□□ 0.08
VTI1A-209ENST00000496445 FGF13Q92913 245 aa15.54■□□□□ 0.08
VTI1A-209ENST00000496445 FGF14Q92915 247 aa15.54■□□□□ 0.08
VTI1A-209ENST00000496445 MSTO1Q9BUK6 570 aa15.54■□□□□ 0.08
VTI1A-209ENST00000496445 ST6GALNAC4Q9H4F1 302 aa15.54■□□□□ 0.08
VTI1A-209ENST00000496445 STK17AQ9UEE5 414 aa15.54■□□□□ 0.08
VTI1A-209ENST00000496445 CPSF3Q9UKF6 684 aaKnown RBP15.54■□□□□ 0.08
VTI1A-209ENST00000496445 CDH7Q9ULB5 785 aa15.54■□□□□ 0.08
VTI1A-209ENST00000496445 UBQLN1Q9UMX0 589 aaKnown RBP15.54■□□□□ 0.08
VTI1A-209ENST00000496445 TCHHQ07283 1943 aa15.54■□□□□ 0.08
VTI1A-209ENST00000496445 ARHGEF37A1IGU5 675 aa15.53■□□□□ 0.08
VTI1A-209ENST00000496445 KRBA1A5PL33 1030 aa15.53■□□□□ 0.08
VTI1A-209ENST00000496445 H7C4K7 107 aa15.53■□□□□ 0.08
VTI1A-209ENST00000496445 M0QZQ0 153 aa15.53■□□□□ 0.08
VTI1A-209ENST00000496445 GALR2O43603 387 aaPredicted RBP15.53■□□□□ 0.08
VTI1A-209ENST00000496445 STX6O43752 255 aa15.53■□□□□ 0.08
VTI1A-209ENST00000496445 PPP1R37O75864 691 aa15.53■□□□□ 0.08
VTI1A-209ENST00000496445 SEC24AO95486 1093 aa15.53■□□□□ 0.08
VTI1A-209ENST00000496445 SRFP11831 508 aa15.53■□□□□ 0.08
VTI1A-209ENST00000496445 NUBP1P53384 320 aa15.53■□□□□ 0.08
VTI1A-209ENST00000496445 KYAT1Q16773 422 aa15.53■□□□□ 0.08
VTI1A-209ENST00000496445 SLC5A9Q2M3M2 681 aa15.53■□□□□ 0.08
VTI1A-209ENST00000496445 CTXN3Q4LDR2 81 aa15.53■□□□□ 0.08
VTI1A-209ENST00000496445 ZNF280DQ6N043 979 aa15.53■□□□□ 0.08
VTI1A-209ENST00000496445 POTEHQ6S545 545 aa15.53■□□□□ 0.08
VTI1A-209ENST00000496445 PARM1Q6UWI2 310 aa15.53■□□□□ 0.08
VTI1A-209ENST00000496445 RTL10Q7L3V2 364 aa15.53■□□□□ 0.08
VTI1A-209ENST00000496445 DYMQ7RTS9 669 aa15.53■□□□□ 0.08
VTI1A-209ENST00000496445 FLCNQ8NFG4 579 aa15.53■□□□□ 0.08
VTI1A-209ENST00000496445 NXPE3Q969Y0 559 aa15.53■□□□□ 0.08
VTI1A-209ENST00000496445 DNAJC19Q96DA6 116 aa15.53■□□□□ 0.08
VTI1A-209ENST00000496445 RPP25Q9BUL9 199 aaKnown RBP15.53■□□□□ 0.08
VTI1A-209ENST00000496445 STRA6Q9BX79 667 aa15.53■□□□□ 0.08
VTI1A-209ENST00000496445 MFSD1Q9H3U5 465 aa15.53■□□□□ 0.08
VTI1A-209ENST00000496445 RPF1Q9H9Y2 349 aaKnown RBP15.53■□□□□ 0.08
VTI1A-209ENST00000496445 FAM86C1Q9NVL1 165 aa15.53■□□□□ 0.08
VTI1A-209ENST00000496445 CCDC39Q9UFE4 941 aa15.53■□□□□ 0.08
VTI1A-209ENST00000496445 FBXL21Q9UKT6 434 aa15.53■□□□□ 0.08
VTI1A-209ENST00000496445 PCDHB8Q9UN66 801 aa15.53■□□□□ 0.08
VTI1A-209ENST00000496445 ZFP37Q9Y6Q3 630 aaPredicted RBP15.53■□□□□ 0.08
VTI1A-209ENST00000496445 WDR87Q6ZQQ6 2873 aa15.52■□□□□ 0.08
VTI1A-209ENST00000496445 PI15O43692 258 aa15.52■□□□□ 0.08
VTI1A-209ENST00000496445 NFICP08651 508 aa15.52■□□□□ 0.08
VTI1A-209ENST00000496445 ATF2P15336 505 aa15.52■□□□□ 0.08
VTI1A-209ENST00000496445 AOC1P19801 751 aa15.52■□□□□ 0.08
VTI1A-209ENST00000496445 NASPP49321 788 aaPredicted RBP15.52■□□□□ 0.08
VTI1A-209ENST00000496445 ARPP19P56211 112 aa15.52■□□□□ 0.08
VTI1A-209ENST00000496445 SLC39A14Q15043 492 aa15.52■□□□□ 0.08
VTI1A-209ENST00000496445 PABPC1LQ4VXU2 614 aaKnown RBP15.52■□□□□ 0.08
VTI1A-209ENST00000496445 RRAGBQ5VZM2 374 aa15.52■□□□□ 0.08
VTI1A-209ENST00000496445 JADE1Q6IE81 842 aa15.52■□□□□ 0.08
VTI1A-209ENST00000496445 ZNF720Q7Z2F6 126 aa15.52■□□□□ 0.08
VTI1A-209ENST00000496445 NPAS3Q8IXF0 933 aa15.52■□□□□ 0.08
VTI1A-209ENST00000496445 TCEAL8Q8IYN2 117 aa15.52■□□□□ 0.08
VTI1A-209ENST00000496445 KRI1Q8N9T8 703 aaKnown RBP15.52■□□□□ 0.08
VTI1A-209ENST00000496445 APPL2Q8NEU8 664 aa15.52■□□□□ 0.08
VTI1A-209ENST00000496445 GPR152Q8TDT2 470 aa15.52■□□□□ 0.08
VTI1A-209ENST00000496445 ZSCAN16Q9H4T2 348 aaPredicted RBP15.52■□□□□ 0.08
VTI1A-209ENST00000496445 CA14Q9ULX7 337 aa15.52■□□□□ 0.08
VTI1A-209ENST00000496445 STYXL1Q9Y6J8 313 aa15.52■□□□□ 0.08
VTI1A-209ENST00000496445 CFAP54Q96N23 3096 aa15.52■□□□□ 0.08
VTI1A-209ENST00000496445 COL4A2P08572 1712 aa15.51■□□□□ 0.07
VTI1A-209ENST00000496445 H0Y858 1186 aa15.51■□□□□ 0.07
VTI1A-209ENST00000496445 NRG2O14511 850 aaPredicted RBP15.51■□□□□ 0.07
VTI1A-209ENST00000496445 VNN2O95498 520 aa15.51■□□□□ 0.07
VTI1A-209ENST00000496445 RHOP08100 348 aa15.51■□□□□ 0.07
VTI1A-209ENST00000496445 ADSSP30520 456 aa15.51■□□□□ 0.07
VTI1A-209ENST00000496445 ABCD1P33897 745 aa15.51■□□□□ 0.07
VTI1A-209ENST00000496445 TXLNAP40222 546 aa15.51■□□□□ 0.07
VTI1A-209ENST00000496445 ACOT2P49753 483 aa15.51■□□□□ 0.07
VTI1A-209ENST00000496445 CLCN5P51795 746 aa15.51■□□□□ 0.07
VTI1A-209ENST00000496445 KCNA1Q09470 495 aa15.51■□□□□ 0.07
VTI1A-209ENST00000496445 SPATA1Q5VX52 437 aa15.51■□□□□ 0.07
VTI1A-209ENST00000496445 TPGS2Q68CL5 300 aa15.51■□□□□ 0.07
VTI1A-209ENST00000496445 ING5Q8WYH8 240 aa15.51■□□□□ 0.07
VTI1A-209ENST00000496445 HVCN1Q96D96 273 aa15.51■□□□□ 0.07
VTI1A-209ENST00000496445 FGFBP2Q9BYJ0 223 aa15.51■□□□□ 0.07
VTI1A-209ENST00000496445 CYP4F11Q9HBI6 524 aa15.51■□□□□ 0.07
VTI1A-209ENST00000496445 SLC2A4RGQ9NR83 387 aa15.51■□□□□ 0.07
VTI1A-209ENST00000496445 WNT16Q9UBV4 365 aa15.51■□□□□ 0.07
VTI1A-209ENST00000496445 KCNH3Q9ULD8 1083 aa15.51■□□□□ 0.07
VTI1A-209ENST00000496445 TIMM13Q9Y5L4 95 aaPredicted RBP15.51■□□□□ 0.07
VTI1A-209ENST00000496445 INSL5Q9Y5Q6 135 aa15.51■□□□□ 0.07
VTI1A-209ENST00000496445 MIA3Q5JRA6 1907 aa15.51■□□□□ 0.07
VTI1A-209ENST00000496445 FRMD3A2A2Y4 597 aa15.5■□□□□ 0.07
VTI1A-209ENST00000496445 PRRG1O14668 218 aa15.5■□□□□ 0.07
VTI1A-209ENST00000496445 SPTLC1O15269 473 aa15.5■□□□□ 0.07
VTI1A-209ENST00000496445 LRG1P02750 347 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms