RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 NT5DC3Q86UY8 548 aa14.65□□□□□ -0.06
SPTBN1-205ENST00000496323 CAGE1Q8TC20 777 aa14.65□□□□□ -0.06
SPTBN1-205ENST00000496323 CXCL16Q9H2A7 254 aa14.65□□□□□ -0.06
SPTBN1-205ENST00000496323 ATMINO43313 823 aaPredicted RBP14.64□□□□□ -0.07
SPTBN1-205ENST00000496323 EIF4BP23588 611 aaKnown RBP14.64□□□□□ -0.07
SPTBN1-205ENST00000496323 GRM5P41594 1212 aa14.64□□□□□ -0.07
SPTBN1-205ENST00000496323 TUBB4BP68371 445 aa14.64□□□□□ -0.07
SPTBN1-205ENST00000496323 CACNB2Q08289 660 aaPredicted RBP14.64□□□□□ -0.07
SPTBN1-205ENST00000496323 RPS6KA1Q15418 735 aa14.64□□□□□ -0.07
SPTBN1-205ENST00000496323 ZNF699Q32M78 642 aa14.64□□□□□ -0.07
SPTBN1-205ENST00000496323 ZNF677Q86XU0 584 aa14.64□□□□□ -0.07
SPTBN1-205ENST00000496323 RHOT2Q8IXI1 618 aa14.64□□□□□ -0.07
SPTBN1-205ENST00000496323 C7orf31Q8N865 590 aa14.64□□□□□ -0.07
SPTBN1-205ENST00000496323 MSANTD4Q8NCY6 345 aa14.64□□□□□ -0.07
SPTBN1-205ENST00000496323 ADPGKQ9BRR6 497 aa14.64□□□□□ -0.07
SPTBN1-205ENST00000496323 EIF2AQ9BY44 585 aaKnown RBP14.64□□□□□ -0.07
SPTBN1-205ENST00000496323 RNF186Q9NXI6 227 aa14.64□□□□□ -0.07
SPTBN1-205ENST00000496323 MROH7Q68CQ1 1323 aa14.64□□□□□ -0.07
SPTBN1-205ENST00000496323 NPTXRO95502 500 aa14.64□□□□□ -0.07
SPTBN1-205ENST00000496323 CYP1A1P04798 512 aaPredicted RBP14.64□□□□□ -0.07
SPTBN1-205ENST00000496323 CYP1A2P05177 515 aa14.64□□□□□ -0.07
SPTBN1-205ENST00000496323 WEE2P0C1S8 567 aa14.64□□□□□ -0.07
SPTBN1-205ENST00000496323 RHOXF2BP0C7M4 288 aa14.64□□□□□ -0.07
SPTBN1-205ENST00000496323 CLCN6P51797 869 aa14.64□□□□□ -0.07
SPTBN1-205ENST00000496323 SNX17Q15036 470 aa14.64□□□□□ -0.07
SPTBN1-205ENST00000496323 DEFB115Q30KQ5 88 aa14.64□□□□□ -0.07
SPTBN1-205ENST00000496323 CXCL17Q6UXB2 119 aa14.64□□□□□ -0.07
SPTBN1-205ENST00000496323 PEX26Q7Z412 305 aa14.64□□□□□ -0.07
SPTBN1-205ENST00000496323 SYCE1Q8N0S2 351 aa14.64□□□□□ -0.07
SPTBN1-205ENST00000496323 RPGRIP1Q96KN7 1286 aa14.64□□□□□ -0.07
SPTBN1-205ENST00000496323 ACAP3Q96P50 834 aa14.64□□□□□ -0.07
SPTBN1-205ENST00000496323 PNKPQ96T60 521 aa14.64□□□□□ -0.07
SPTBN1-205ENST00000496323 RHOXF2Q9BQY4 288 aa14.64□□□□□ -0.07
SPTBN1-205ENST00000496323 UPF3AQ9H1J1 476 aaKnown RBP14.64□□□□□ -0.07
SPTBN1-205ENST00000496323 CISHQ9NSE2 258 aa14.64□□□□□ -0.07
SPTBN1-205ENST00000496323 POLIQ9UNA4 740 aa14.64□□□□□ -0.07
SPTBN1-205ENST00000496323 SEPT4O43236 478 aa14.63□□□□□ -0.07
SPTBN1-205ENST00000496323 ITGB3P05106 788 aa14.63□□□□□ -0.07
SPTBN1-205ENST00000496323 KRT19P08727 400 aa14.63□□□□□ -0.07
SPTBN1-205ENST00000496323 CD58P19256 250 aa14.63□□□□□ -0.07
SPTBN1-205ENST00000496323 GNA15P30679 374 aa14.63□□□□□ -0.07
SPTBN1-205ENST00000496323 NKX3-2P78367 333 aa14.63□□□□□ -0.07
SPTBN1-205ENST00000496323 SP3Q02447 781 aa14.63□□□□□ -0.07
SPTBN1-205ENST00000496323 C2orf54Q08AI8 447 aa14.63□□□□□ -0.07
SPTBN1-205ENST00000496323 DCAF4L1Q3SXM0 396 aa14.63□□□□□ -0.07
SPTBN1-205ENST00000496323 SPATA4Q8NEY3 305 aa14.63□□□□□ -0.07
SPTBN1-205ENST00000496323 CPA5Q8WXQ8 436 aa14.63□□□□□ -0.07
SPTBN1-205ENST00000496323 CYFIP2Q96F07 1278 aa14.63□□□□□ -0.07
SPTBN1-205ENST00000496323 HES6Q96HZ4 224 aa14.63□□□□□ -0.07
SPTBN1-205ENST00000496323 ZSWIM1Q9BR11 485 aa14.63□□□□□ -0.07
SPTBN1-205ENST00000496323 MTG1Q9BT17 334 aaPredicted RBP14.63□□□□□ -0.07
SPTBN1-205ENST00000496323 CTTNBP2NLQ9P2B4 639 aa14.63□□□□□ -0.07
SPTBN1-205ENST00000496323 HTTP42858 3142 aa14.62□□□□□ -0.07
SPTBN1-205ENST00000496323 KPNA6O60684 536 aa14.62□□□□□ -0.07
SPTBN1-205ENST00000496323 MTA2O94776 668 aa14.62□□□□□ -0.07
SPTBN1-205ENST00000496323 SSTR3P32745 418 aaPredicted RBP14.62□□□□□ -0.07
SPTBN1-205ENST00000496323 GUCY2FP51841 1108 aa14.62□□□□□ -0.07
SPTBN1-205ENST00000496323 ITIH3Q06033 890 aa14.62□□□□□ -0.07
SPTBN1-205ENST00000496323 PCBP1Q15365 356 aaKnown RBP eCLIP14.62□□□□□ -0.072e-8■■■■□ 23.8
SPTBN1-205ENST00000496323 SLC27A1Q6PCB7 646 aa14.62□□□□□ -0.07
SPTBN1-205ENST00000496323 SCARA5Q6ZMJ2 495 aa14.62□□□□□ -0.07
SPTBN1-205ENST00000496323 SNTG2Q9NY99 539 aa14.62□□□□□ -0.07
SPTBN1-205ENST00000496323 GTF3C4Q9UKN8 822 aa14.62□□□□□ -0.07
SPTBN1-205ENST00000496323 C2CD2Q9Y426 696 aa14.62□□□□□ -0.07
SPTBN1-205ENST00000496323 KCNK3O14649 394 aa14.62□□□□□ -0.07
SPTBN1-205ENST00000496323 ADAMTS4O75173 837 aa14.62□□□□□ -0.07
SPTBN1-205ENST00000496323 GNAT1P11488 350 aa14.62□□□□□ -0.07
SPTBN1-205ENST00000496323 ELNP15502 786 aa14.62□□□□□ -0.07
SPTBN1-205ENST00000496323 CCND3P30281 292 aaPredicted RBP14.62□□□□□ -0.07
SPTBN1-205ENST00000496323 TMEM132DQ14C87 1099 aa14.62□□□□□ -0.07
SPTBN1-205ENST00000496323 NBPF20Q3BBV1 942 aa14.62□□□□□ -0.07
SPTBN1-205ENST00000496323 NAA35Q5VZE5 725 aa14.62□□□□□ -0.07
SPTBN1-205ENST00000496323 NOTUMQ6P988 496 aa14.62□□□□□ -0.07
SPTBN1-205ENST00000496323 TAF4BQ92750 862 aa14.62□□□□□ -0.07
SPTBN1-205ENST00000496323 ZNF653Q96CK0 615 aa14.62□□□□□ -0.07
SPTBN1-205ENST00000496323 ZNF446Q9NWS9 450 aa14.62□□□□□ -0.07
SPTBN1-205ENST00000496323 NXF1Q9UBU9 619 aaKnown RBP14.62□□□□□ -0.07
SPTBN1-205ENST00000496323 HES2Q9Y543 173 aa14.62□□□□□ -0.07
SPTBN1-205ENST00000496323 CES2O00748 559 aa14.61□□□□□ -0.07
SPTBN1-205ENST00000496323 RARBP10826 455 aa14.61□□□□□ -0.07
SPTBN1-205ENST00000496323 CENPCQ03188 943 aa14.61□□□□□ -0.07
SPTBN1-205ENST00000496323 WDR72Q3MJ13 1102 aa14.61□□□□□ -0.07
SPTBN1-205ENST00000496323 CFAP221Q4G0U5 840 aa14.61□□□□□ -0.07
SPTBN1-205ENST00000496323 CCDC181Q5TID7 509 aa14.61□□□□□ -0.07
SPTBN1-205ENST00000496323 PASD1Q8IV76 773 aa14.61□□□□□ -0.07
SPTBN1-205ENST00000496323 MCOLN2Q8IZK6 566 aa14.61□□□□□ -0.07
SPTBN1-205ENST00000496323 NME8Q8N427 588 aa14.61□□□□□ -0.07
SPTBN1-205ENST00000496323 ZNF606Q8WXB4 792 aa14.61□□□□□ -0.07
SPTBN1-205ENST00000496323 ZMAT2Q96NC0 199 aaKnown RBP14.61□□□□□ -0.07
SPTBN1-205ENST00000496323 NUP85Q9BW27 656 aa14.61□□□□□ -0.07
SPTBN1-205ENST00000496323 BCO2Q9BYV7 579 aa14.61□□□□□ -0.07
SPTBN1-205ENST00000496323 RNF14Q9UBS8 474 aa14.61□□□□□ -0.07
SPTBN1-205ENST00000496323 GTF2IRD1Q9UHL9 959 aa14.61□□□□□ -0.07
SPTBN1-205ENST00000496323 AMFRQ9UKV5 643 aa14.61□□□□□ -0.07
SPTBN1-205ENST00000496323 RAB21Q9UL25 225 aa14.61□□□□□ -0.07
SPTBN1-205ENST00000496323 DDX3YO15523 660 aaKnown RBP14.61□□□□□ -0.07
SPTBN1-205ENST00000496323 POLR2BP30876 1174 aaKnown RBP14.61□□□□□ -0.07
SPTBN1-205ENST00000496323 RAP1GAPP47736 663 aa14.61□□□□□ -0.07
SPTBN1-205ENST00000496323 CRYBB1P53674 252 aaPredicted RBP14.61□□□□□ -0.07
SPTBN1-205ENST00000496323 NOMO3P69849 1222 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms