RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 CCDC173Q0VFZ6 552 aa9.95□□□□□ -0.82
GARNL3-219ENST00000495172 PSMD2Q13200 908 aa9.95□□□□□ -0.82
GARNL3-219ENST00000495172 NMIQ13287 307 aaPredicted RBP9.95□□□□□ -0.82
GARNL3-219ENST00000495172 CEP55Q53EZ4 464 aa9.95□□□□□ -0.82
GARNL3-219ENST00000495172 ARID3BQ8IVW6 561 aaPredicted RBP9.95□□□□□ -0.82
GARNL3-219ENST00000495172 GPR65Q8IYL9 337 aa9.95□□□□□ -0.82
GARNL3-219ENST00000495172 MDGA1Q8NFP4 955 aa9.95□□□□□ -0.82
GARNL3-219ENST00000495172 UBAC1Q9BSL1 405 aa9.95□□□□□ -0.82
GARNL3-219ENST00000495172 POLR3CQ9BUI4 534 aaPredicted RBP9.95□□□□□ -0.82
GARNL3-219ENST00000495172 CAPN10Q9HC96 672 aa9.95□□□□□ -0.82
GARNL3-219ENST00000495172 SUCLA2Q9P2R7 463 aaPredicted RBP9.95□□□□□ -0.82
GARNL3-219ENST00000495172 EBF1Q9UH73 591 aa9.95□□□□□ -0.82
GARNL3-219ENST00000495172 PILRBQ9UKJ0 227 aa9.95□□□□□ -0.82
GARNL3-219ENST00000495172 CEP131Q9UPN4 1083 aa9.95□□□□□ -0.82
GARNL3-219ENST00000495172 A0A1W2PRU2 124 aa9.94□□□□□ -0.82
GARNL3-219ENST00000495172 FAM86B1E9PN63 330 aa9.94□□□□□ -0.82
GARNL3-219ENST00000495172 MEIS1O00470 390 aa9.94□□□□□ -0.82
GARNL3-219ENST00000495172 ZNF197O14709 1029 aa9.94□□□□□ -0.82
GARNL3-219ENST00000495172 ANP32CO43423 234 aa9.94□□□□□ -0.82
GARNL3-219ENST00000495172 GJB3O75712 270 aa9.94□□□□□ -0.82
GARNL3-219ENST00000495172 FAM86B2P0C5J1 330 aa9.94□□□□□ -0.82
GARNL3-219ENST00000495172 POU3F2P20265 443 aaPredicted RBP9.94□□□□□ -0.82
GARNL3-219ENST00000495172 TKTP29401 623 aaKnown RBP9.94□□□□□ -0.82
GARNL3-219ENST00000495172 GALK1P51570 392 aa9.94□□□□□ -0.82
GARNL3-219ENST00000495172 GFPT1Q06210 699 aaPredicted RBP9.94□□□□□ -0.82
GARNL3-219ENST00000495172 GRSF1Q12849 480 aaKnown RBP eCLIP9.94□□□□□ -0.82
GARNL3-219ENST00000495172 MYO1EQ12965 1108 aa9.94□□□□□ -0.82
GARNL3-219ENST00000495172 TRAF1Q13077 416 aa9.94□□□□□ -0.82
GARNL3-219ENST00000495172 C2orf27AQ580R0 203 aa9.94□□□□□ -0.82
GARNL3-219ENST00000495172 CCDC178Q5BJE1 867 aa9.94□□□□□ -0.82
GARNL3-219ENST00000495172 LRRC69Q6ZNQ3 347 aa9.94□□□□□ -0.82
GARNL3-219ENST00000495172 SYT13Q7L8C5 426 aa9.94□□□□□ -0.82
GARNL3-219ENST00000495172 TSTD1Q8NFU3 115 aa9.94□□□□□ -0.82
GARNL3-219ENST00000495172 CYP4F11Q9HBI6 524 aa9.94□□□□□ -0.82
GARNL3-219ENST00000495172 CPNE5Q9HCH3 593 aa9.94□□□□□ -0.82
GARNL3-219ENST00000495172 HPS4Q9NQG7 708 aa9.94□□□□□ -0.82
GARNL3-219ENST00000495172 BMP2KQ9NSY1 1161 aaPredicted RBP9.94□□□□□ -0.82
GARNL3-219ENST00000495172 HSPBP1Q9NZL4 362 aa9.94□□□□□ -0.82
GARNL3-219ENST00000495172 MTRRQ9UBK8 725 aa9.94□□□□□ -0.82
GARNL3-219ENST00000495172 PCOLCE2Q9UKZ9 415 aa9.94□□□□□ -0.82
GARNL3-219ENST00000495172 SLC6A14Q9UN76 642 aa9.94□□□□□ -0.82
GARNL3-219ENST00000495172 KNTC1P50748 2209 aa9.94□□□□□ -0.82
GARNL3-219ENST00000495172 ZMYM6O95789 1325 aa9.93□□□□□ -0.82
GARNL3-219ENST00000495172 ARHGEF37A1IGU5 675 aa9.93□□□□□ -0.82
GARNL3-219ENST00000495172 ENO4A6NNW6 628 aa9.93□□□□□ -0.82
GARNL3-219ENST00000495172 ERVH48-1M5A8F1 160 aa9.93□□□□□ -0.82
GARNL3-219ENST00000495172 TNFRSF10BO14763 440 aa9.93□□□□□ -0.82
GARNL3-219ENST00000495172 ATMINO43313 823 aaPredicted RBP9.93□□□□□ -0.82
GARNL3-219ENST00000495172 PLEKHA8P1O95397 391 aa9.93□□□□□ -0.82
GARNL3-219ENST00000495172 SRGAP2CP0DJJ0 459 aa9.93□□□□□ -0.82
GARNL3-219ENST00000495172 PCP11498 1178 aaKnown RBP9.93□□□□□ -0.82
GARNL3-219ENST00000495172 ARSAP15289 507 aa9.93□□□□□ -0.82
GARNL3-219ENST00000495172 ADSSP30520 456 aa9.93□□□□□ -0.82
GARNL3-219ENST00000495172 IL12RB1P42701 662 aa9.93□□□□□ -0.82
GARNL3-219ENST00000495172 SEC13P55735 322 aa9.93□□□□□ -0.82
GARNL3-219ENST00000495172 ROR1Q01973 937 aa9.93□□□□□ -0.82
GARNL3-219ENST00000495172 NBR1Q14596 966 aa9.93□□□□□ -0.82
GARNL3-219ENST00000495172 TARBP2Q15633 366 aaKnown RBP9.93□□□□□ -0.82
GARNL3-219ENST00000495172 ITPRIPL2Q3MIP1 535 aa9.93□□□□□ -0.82
GARNL3-219ENST00000495172 MCMDC2Q4G0Z9 681 aa9.93□□□□□ -0.82
GARNL3-219ENST00000495172 CYP4A22Q5TCH4 519 aa9.93□□□□□ -0.82
GARNL3-219ENST00000495172 LYSMD4Q5XG99 296 aa9.93□□□□□ -0.82
GARNL3-219ENST00000495172 PDXDC1Q6P996 788 aa9.93□□□□□ -0.82
GARNL3-219ENST00000495172 C1orf228Q6PIY5 440 aa9.93□□□□□ -0.82
GARNL3-219ENST00000495172 LPCAT2Q7L5N7 544 aa9.93□□□□□ -0.82
GARNL3-219ENST00000495172 TMC8Q8IU68 726 aa9.93□□□□□ -0.82
GARNL3-219ENST00000495172 CCDC33Q8N5R6 958 aa9.93□□□□□ -0.82
GARNL3-219ENST00000495172 SETD7Q8WTS6 366 aaKnown RBP9.93□□□□□ -0.82
GARNL3-219ENST00000495172 GJA10Q969M2 543 aa9.93□□□□□ -0.82
GARNL3-219ENST00000495172 NAF1Q96HR8 494 aaKnown RBP9.93□□□□□ -0.82
GARNL3-219ENST00000495172 CEP89Q96ST8 783 aa9.93□□□□□ -0.82
GARNL3-219ENST00000495172 EBF3Q9H4W6 596 aa9.93□□□□□ -0.82
GARNL3-219ENST00000495172 IL21RQ9HBE5 538 aa9.93□□□□□ -0.82
GARNL3-219ENST00000495172 HELLSQ9NRZ9 838 aa9.93□□□□□ -0.82
GARNL3-219ENST00000495172 ZBTB40Q9NUA8 1239 aa9.93□□□□□ -0.82
GARNL3-219ENST00000495172 DNAAF2Q9NVR5 837 aaKnown RBP9.93□□□□□ -0.82
GARNL3-219ENST00000495172 SEPT9Q9UHD8 586 aaPredicted RBP9.93□□□□□ -0.82
GARNL3-219ENST00000495172 SAMM50Q9Y512 469 aa9.93□□□□□ -0.82
GARNL3-219ENST00000495172 INSL5Q9Y5Q6 135 aa9.93□□□□□ -0.82
GARNL3-219ENST00000495172 ARID2Q68CP9 1835 aa9.93□□□□□ -0.82
GARNL3-219ENST00000495172 CACNA1DQ01668 2161 aa9.92□□□□□ -0.82
GARNL3-219ENST00000495172 CAPN8A6NHC0 703 aa9.92□□□□□ -0.82
GARNL3-219ENST00000495172 ARHGAP33O14559 1287 aa9.92□□□□□ -0.82
GARNL3-219ENST00000495172 ADAMTS3O15072 1205 aa9.92□□□□□ -0.82
GARNL3-219ENST00000495172 PSAPP07602 524 aa9.92□□□□□ -0.82
GARNL3-219ENST00000495172 TLE3Q04726 772 aa9.92□□□□□ -0.82
GARNL3-219ENST00000495172 TWF1Q12792 350 aa9.92□□□□□ -0.82
GARNL3-219ENST00000495172 ARHGAP40Q5TG30 622 aa9.92□□□□□ -0.82
GARNL3-219ENST00000495172 KRT25Q7Z3Z0 450 aa9.92□□□□□ -0.82
GARNL3-219ENST00000495172 PLA2G4DQ86XP0 818 aa9.92□□□□□ -0.82
GARNL3-219ENST00000495172 PDCD7Q8N8D1 485 aaKnown RBP9.92□□□□□ -0.82
GARNL3-219ENST00000495172 RNF25Q96BH1 459 aaPredicted RBP9.92□□□□□ -0.82
GARNL3-219ENST00000495172 DDX27Q96GQ7 796 aaKnown RBP9.92□□□□□ -0.82
GARNL3-219ENST00000495172 ZDHHC4Q9NPG8 344 aa9.92□□□□□ -0.82
GARNL3-219ENST00000495172 GKN1Q9NS71 199 aa9.92□□□□□ -0.82
GARNL3-219ENST00000495172 NF1P21359 2839 aa9.92□□□□□ -0.82
GARNL3-219ENST00000495172 NUP210Q8TEM1 1887 aaPredicted RBP9.91□□□□□ -0.82
GARNL3-219ENST00000495172 FBN3Q75N90 2809 aa9.91□□□□□ -0.82
GARNL3-219ENST00000495172 TTLL13PA6NNM8 815 aa9.91□□□□□ -0.82
GARNL3-219ENST00000495172 IPO5O00410 1097 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms