RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 CEBPBP17676 345 aa12.7□□□□□ -0.38
VTI1A-208ENST00000494728 MARCKSP29966 332 aaPredicted RBP12.7□□□□□ -0.38
VTI1A-208ENST00000494728 LONP1P36776 959 aaKnown RBP12.7□□□□□ -0.38
VTI1A-208ENST00000494728 UBA7P41226 1012 aa12.7□□□□□ -0.38
VTI1A-208ENST00000494728 CCR2P41597 374 aa12.7□□□□□ -0.38
VTI1A-208ENST00000494728 SMTNP53814 917 aa12.7□□□□□ -0.38
VTI1A-208ENST00000494728 ARPP19P56211 112 aa12.7□□□□□ -0.38
VTI1A-208ENST00000494728 ZBTB6Q15916 424 aa12.7□□□□□ -0.38
VTI1A-208ENST00000494728 PABPC1LQ4VXU2 614 aaKnown RBP12.7□□□□□ -0.38
VTI1A-208ENST00000494728 CCDC105Q8IYK2 499 aa12.7□□□□□ -0.38
VTI1A-208ENST00000494728 LARP4BQ92615 738 aaKnown RBP12.7□□□□□ -0.38
VTI1A-208ENST00000494728 ATOH1Q92858 354 aaPredicted RBP12.7□□□□□ -0.38
VTI1A-208ENST00000494728 BICD1Q96G01 975 aa12.7□□□□□ -0.38
VTI1A-208ENST00000494728 CALML4Q96GE6 196 aa12.7□□□□□ -0.38
VTI1A-208ENST00000494728 CLIC6Q96NY7 704 aa12.7□□□□□ -0.38
VTI1A-208ENST00000494728 KXD1Q9BQD3 176 aa12.7□□□□□ -0.38
VTI1A-208ENST00000494728 TBC1D17Q9HA65 648 aa12.7□□□□□ -0.38
VTI1A-208ENST00000494728 LARSQ9P2J5 1176 aaKnown RBP12.7□□□□□ -0.38
VTI1A-208ENST00000494728 FBXL5Q9UKA1 691 aa12.7□□□□□ -0.38
VTI1A-208ENST00000494728 TBX20Q9UMR3 447 aa12.7□□□□□ -0.38
VTI1A-208ENST00000494728 TIMM13Q9Y5L4 95 aaPredicted RBP12.7□□□□□ -0.38
VTI1A-208ENST00000494728 ARHGEF37A1IGU5 675 aa12.69□□□□□ -0.38
VTI1A-208ENST00000494728 LACTBL1A8MY62 500 aa12.69□□□□□ -0.38
VTI1A-208ENST00000494728 ANKRD63C9JTQ0 380 aa12.69□□□□□ -0.38
VTI1A-208ENST00000494728 TRAPPC3O43617 180 aa12.69□□□□□ -0.38
VTI1A-208ENST00000494728 XYLBO75191 536 aa12.69□□□□□ -0.38
VTI1A-208ENST00000494728 LRRN2O75325 713 aa12.69□□□□□ -0.38
VTI1A-208ENST00000494728 FAM13AO94988 1023 aa12.69□□□□□ -0.38
VTI1A-208ENST00000494728 RHOP08100 348 aa12.69□□□□□ -0.38
VTI1A-208ENST00000494728 CLTAP09496 248 aa12.69□□□□□ -0.38
VTI1A-208ENST00000494728 OR4Q2P0C623 313 aa12.69□□□□□ -0.38
VTI1A-208ENST00000494728 MCM4P33991 863 aa12.69□□□□□ -0.38
VTI1A-208ENST00000494728 MATR3P43243 847 aaKnown RBP eCLIP12.69□□□□□ -0.38
VTI1A-208ENST00000494728 AARSP49588 968 aaKnown RBP eCLIP12.69□□□□□ -0.38
VTI1A-208ENST00000494728 LIG4P49917 911 aa12.69□□□□□ -0.38
VTI1A-208ENST00000494728 ZC2HC1CQ53FD0 456 aaPredicted RBP12.69□□□□□ -0.38
VTI1A-208ENST00000494728 PRSS36Q5K4E3 855 aa12.69□□□□□ -0.38
VTI1A-208ENST00000494728 MAP4K3Q8IVH8 894 aa12.69□□□□□ -0.38
VTI1A-208ENST00000494728 MYCT1Q8N699 235 aa12.69□□□□□ -0.38
VTI1A-208ENST00000494728 DDX12PQ92771 950 aa12.69□□□□□ -0.38
VTI1A-208ENST00000494728 TCEAL4Q96EI5 215 aa12.69□□□□□ -0.38
VTI1A-208ENST00000494728 FOXQ1Q9C009 403 aa12.69□□□□□ -0.38
VTI1A-208ENST00000494728 CRISPLD1Q9H336 500 aa12.69□□□□□ -0.38
VTI1A-208ENST00000494728 PARVGQ9HBI0 331 aa12.69□□□□□ -0.38
VTI1A-208ENST00000494728 ARHGEF3Q9NR81 526 aa12.69□□□□□ -0.38
VTI1A-208ENST00000494728 WNT16Q9UBV4 365 aa12.69□□□□□ -0.38
VTI1A-208ENST00000494728 NUB1Q9Y5A7 615 aa12.69□□□□□ -0.38
VTI1A-208ENST00000494728 INSL5Q9Y5Q6 135 aa12.69□□□□□ -0.38
VTI1A-208ENST00000494728 NCANO14594 1321 aa12.68□□□□□ -0.38
VTI1A-208ENST00000494728 A0A087X0B3 334 aa12.68□□□□□ -0.38
VTI1A-208ENST00000494728 A0A0B4J269 797 aa12.68□□□□□ -0.38
VTI1A-208ENST00000494728 SPTLC1O15269 473 aa12.68□□□□□ -0.38
VTI1A-208ENST00000494728 SLC26A4O43511 780 aa12.68□□□□□ -0.38
VTI1A-208ENST00000494728 TRAK2O60296 914 aa12.68□□□□□ -0.38
VTI1A-208ENST00000494728 GFRA3O60609 400 aa12.68□□□□□ -0.38
VTI1A-208ENST00000494728 ADRB2P07550 413 aa12.68□□□□□ -0.38
VTI1A-208ENST00000494728 NFICP08651 508 aa12.68□□□□□ -0.38
VTI1A-208ENST00000494728 GLULP15104 373 aa12.68□□□□□ -0.38
VTI1A-208ENST00000494728 ATF2P15336 505 aa12.68□□□□□ -0.38
VTI1A-208ENST00000494728 SYT1P21579 422 aa12.68□□□□□ -0.38
VTI1A-208ENST00000494728 FCARP24071 287 aa12.68□□□□□ -0.38
VTI1A-208ENST00000494728 LRPAP1P30533 357 aa12.68□□□□□ -0.38
VTI1A-208ENST00000494728 RPL9P32969 192 aaKnown RBP12.68□□□□□ -0.38
VTI1A-208ENST00000494728 NUBP1P53384 320 aa12.68□□□□□ -0.38
VTI1A-208ENST00000494728 GPC5P78333 572 aa12.68□□□□□ -0.38
VTI1A-208ENST00000494728 PPP2R3AQ06190 1150 aa12.68□□□□□ -0.38
VTI1A-208ENST00000494728 KCNA1Q09470 495 aa12.68□□□□□ -0.38
VTI1A-208ENST00000494728 UVSSAQ2YD98 709 aa12.68□□□□□ -0.38
VTI1A-208ENST00000494728 CTXN3Q4LDR2 81 aa12.68□□□□□ -0.38
VTI1A-208ENST00000494728 ASCL5Q7RTU5 278 aa12.68□□□□□ -0.38
VTI1A-208ENST00000494728 FRMD5Q7Z6J6 570 aa12.68□□□□□ -0.38
VTI1A-208ENST00000494728 TCEAL8Q8IYN2 117 aa12.68□□□□□ -0.38
VTI1A-208ENST00000494728 ZNF461Q8TAF7 563 aa12.68□□□□□ -0.38
VTI1A-208ENST00000494728 NXPE3Q969Y0 559 aa12.68□□□□□ -0.38
VTI1A-208ENST00000494728 KIF12Q96FN5 646 aa12.68□□□□□ -0.38
VTI1A-208ENST00000494728 FGFBP2Q9BYJ0 223 aa12.68□□□□□ -0.38
VTI1A-208ENST00000494728 PLA2G2FQ9BZM2 168 aa12.68□□□□□ -0.38
VTI1A-208ENST00000494728 CCSER1Q9C0I3 900 aa12.68□□□□□ -0.38
VTI1A-208ENST00000494728 ZHX3Q9H4I2 956 aa12.68□□□□□ -0.38
VTI1A-208ENST00000494728 SLC2A4RGQ9NR83 387 aa12.68□□□□□ -0.38
VTI1A-208ENST00000494728 FOXD4L1Q9NU39 408 aa12.68□□□□□ -0.38
VTI1A-208ENST00000494728 DLGAP2Q9P1A6 1054 aa12.68□□□□□ -0.38
VTI1A-208ENST00000494728 PCDHB8Q9UN66 801 aa12.68□□□□□ -0.38
VTI1A-208ENST00000494728 MTMR6Q9Y217 621 aa12.68□□□□□ -0.38
VTI1A-208ENST00000494728 M0QZQ0 153 aa12.67□□□□□ -0.38
VTI1A-208ENST00000494728 OGTO15294 1046 aa12.67□□□□□ -0.38
VTI1A-208ENST00000494728 MOSPD3O75425 235 aa12.67□□□□□ -0.38
VTI1A-208ENST00000494728 PPP1R37O75864 691 aa12.67□□□□□ -0.38
VTI1A-208ENST00000494728 BMP15O95972 392 aa12.67□□□□□ -0.38
VTI1A-208ENST00000494728 DCNP07585 359 aaKnown RBP12.67□□□□□ -0.38
VTI1A-208ENST00000494728 NBL1P41271 181 aa12.67□□□□□ -0.38
VTI1A-208ENST00000494728 WNT7BP56706 349 aa12.67□□□□□ -0.38
VTI1A-208ENST00000494728 GTF2BQ00403 316 aa12.67□□□□□ -0.38
VTI1A-208ENST00000494728 CEBPZQ03701 1054 aaKnown RBP12.67□□□□□ -0.38
VTI1A-208ENST00000494728 JADE1Q6IE81 842 aa12.67□□□□□ -0.38
VTI1A-208ENST00000494728 ZNF280DQ6N043 979 aa12.67□□□□□ -0.38
VTI1A-208ENST00000494728 RNF19BQ6ZMZ0 732 aa12.67□□□□□ -0.38
VTI1A-208ENST00000494728 DYMQ7RTS9 669 aa12.67□□□□□ -0.38
VTI1A-208ENST00000494728 SFR1Q86XK3 245 aa12.67□□□□□ -0.38
VTI1A-208ENST00000494728 HS6ST3Q8IZP7 471 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms