RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 SCHIP1Q9P0W5 487 aaPredicted RBP20.13■□□□□ 0.81
COL27A1-207ENST00000494090 USP32Q8NFA0 1604 aa20.13■□□□□ 0.81
COL27A1-207ENST00000494090 UBA6A0AVT1 1052 aaPredicted RBP20.13■□□□□ 0.81
COL27A1-207ENST00000494090 TAF1CQ15572 869 aaPredicted RBP20.13■□□□□ 0.81
COL27A1-207ENST00000494090 UGP2Q16851 508 aa20.13■□□□□ 0.81
COL27A1-207ENST00000494090 TMEM117Q9H0C3 514 aa20.13■□□□□ 0.81
COL27A1-207ENST00000494090 ATXN8OSP0DMR3 200 aa20.13■□□□□ 0.81
COL27A1-207ENST00000494090 CARSP49589 748 aaKnown RBP20.13■□□□□ 0.81
COL27A1-207ENST00000494090 OR9Q1Q8NGQ5 310 aa20.13■□□□□ 0.81
COL27A1-207ENST00000494090 RIN2Q8WYP3 895 aaPredicted RBP20.13■□□□□ 0.81
COL27A1-207ENST00000494090 RIT2Q99578 217 aa20.13■□□□□ 0.81
COL27A1-207ENST00000494090 ADA2Q9NZK5 511 aa20.13■□□□□ 0.81
COL27A1-207ENST00000494090 PSMC3IPQ9P2W1 217 aaPredicted RBP20.13■□□□□ 0.81
COL27A1-207ENST00000494090 AGAP1Q9UPQ3 857 aa20.13■□□□□ 0.81
COL27A1-207ENST00000494090 NEU2Q9Y3R4 380 aa20.13■□□□□ 0.81
COL27A1-207ENST00000494090 C3orf70A6NLC5 250 aaPredicted RBP20.12■□□□□ 0.81
COL27A1-207ENST00000494090 KLRC1P26715 233 aa20.12■□□□□ 0.81
COL27A1-207ENST00000494090 LSP1P33241 339 aa20.12■□□□□ 0.81
COL27A1-207ENST00000494090 SERPINB4P48594 390 aa20.12■□□□□ 0.81
COL27A1-207ENST00000494090 RBBP8NLQ8NC74 664 aaPredicted RBP20.12■□□□□ 0.81
COL27A1-207ENST00000494090 ELP3Q9H9T3 547 aa20.12■□□□□ 0.81
COL27A1-207ENST00000494090 ZFATQ9P243 1243 aa20.12■□□□□ 0.81
COL27A1-207ENST00000494090 MAD2L2Q9UI95 211 aa20.12■□□□□ 0.81
COL27A1-207ENST00000494090 CNOT7Q9UIV1 285 aaKnown RBP20.12■□□□□ 0.81
COL27A1-207ENST00000494090 KBTBD13C9JR72 458 aa20.12■□□□□ 0.81
COL27A1-207ENST00000494090 DNAJC6O75061 913 aa20.12■□□□□ 0.81
COL27A1-207ENST00000494090 TROAPQ12815 778 aa20.12■□□□□ 0.81
COL27A1-207ENST00000494090 TMEM132DQ14C87 1099 aa20.12■□□□□ 0.81
COL27A1-207ENST00000494090 FAM151AQ8WW52 585 aa20.12■□□□□ 0.81
COL27A1-207ENST00000494090 OTUB1Q96FW1 271 aaPredicted RBP20.12■□□□□ 0.81
COL27A1-207ENST00000494090 DNAJC7Q99615 494 aa20.12■□□□□ 0.81
COL27A1-207ENST00000494090 ERP44Q9BS26 406 aa20.12■□□□□ 0.81
COL27A1-207ENST00000494090 KCNN4O15554 427 aa20.12■□□□□ 0.81
COL27A1-207ENST00000494090 COMTP21964 271 aa20.12■□□□□ 0.81
COL27A1-207ENST00000494090 NCOA4Q13772 614 aa20.12■□□□□ 0.81
COL27A1-207ENST00000494090 ZC2HC1CQ53FD0 456 aaPredicted RBP20.12■□□□□ 0.81
COL27A1-207ENST00000494090 KLHL11Q9NVR0 708 aa20.12■□□□□ 0.81
COL27A1-207ENST00000494090 PCDHB2Q9Y5E7 798 aa20.12■□□□□ 0.81
COL27A1-207ENST00000494090 LCP1P13796 627 aa20.12■□□□□ 0.81
COL27A1-207ENST00000494090 GRIK1P39086 918 aa20.12■□□□□ 0.81
COL27A1-207ENST00000494090 BAATQ14032 418 aaPredicted RBP20.12■□□□□ 0.81
COL27A1-207ENST00000494090 DCAF4L1Q3SXM0 396 aa20.12■□□□□ 0.81
COL27A1-207ENST00000494090 CLEC10AQ8IUN9 316 aa20.12■□□□□ 0.81
COL27A1-207ENST00000494090 ICA1LQ8NDH6 482 aa20.12■□□□□ 0.81
COL27A1-207ENST00000494090 TMEM8AQ9HCN3 771 aa20.12■□□□□ 0.81
COL27A1-207ENST00000494090 HPSEQ9Y251 543 aa20.12■□□□□ 0.81
COL27A1-207ENST00000494090 CD163L1Q9NR16 1453 aa20.12■□□□□ 0.81
COL27A1-207ENST00000494090 PHF20L1A8MW92 1017 aa20.12■□□□□ 0.81
COL27A1-207ENST00000494090 ACOT2P49753 483 aa20.12■□□□□ 0.81
COL27A1-207ENST00000494090 TMED1Q13445 227 aa20.12■□□□□ 0.81
COL27A1-207ENST00000494090 VPS72Q15906 364 aa20.12■□□□□ 0.81
COL27A1-207ENST00000494090 VCPKMTQ9H867 229 aa20.12■□□□□ 0.81
COL27A1-207ENST00000494090 YY1AP1Q9H869 796 aa20.12■□□□□ 0.81
COL27A1-207ENST00000494090 STX18Q9P2W9 335 aaKnown RBP20.12■□□□□ 0.81
COL27A1-207ENST00000494090 DBR1Q9UK59 544 aaKnown RBP20.12■□□□□ 0.81
COL27A1-207ENST00000494090 PGM1P36871 562 aa20.11■□□□□ 0.81
COL27A1-207ENST00000494090 SULT1E1P49888 294 aa20.11■□□□□ 0.81
COL27A1-207ENST00000494090 FASTKD1Q53R41 847 aaKnown RBP20.11■□□□□ 0.81
COL27A1-207ENST00000494090 PRR5LQ6MZQ0 368 aa20.11■□□□□ 0.81
COL27A1-207ENST00000494090 SEC16BQ96JE7 1060 aa20.11■□□□□ 0.81
COL27A1-207ENST00000494090 PLAGL2Q9UPG8 496 aa20.11■□□□□ 0.81
COL27A1-207ENST00000494090 ALG6Q9Y672 507 aa20.11■□□□□ 0.81
COL27A1-207ENST00000494090 FAM47DPA6NHR8 397 aa20.11■□□□□ 0.81
COL27A1-207ENST00000494090 DFFAO00273 331 aa20.11■□□□□ 0.81
COL27A1-207ENST00000494090 ANKS3Q6ZW76 656 aa20.11■□□□□ 0.81
COL27A1-207ENST00000494090 OR2W6PQ8NHA6 318 aa20.11■□□□□ 0.81
COL27A1-207ENST00000494090 TSPAN17Q96FV3 270 aa20.11■□□□□ 0.81
COL27A1-207ENST00000494090 KCNA1Q09470 495 aa20.11■□□□□ 0.81
COL27A1-207ENST00000494090 AGGF1Q8N302 714 aaeCLIP20.11■□□□□ 0.813e-6■□□□□ 10.9
COL27A1-207ENST00000494090 ARHGEF26Q96DR7 871 aa20.11■□□□□ 0.81
COL27A1-207ENST00000494090 FAM167BQ9BTA0 163 aa20.11■□□□□ 0.81
COL27A1-207ENST00000494090 CYP4F11Q9HBI6 524 aa20.11■□□□□ 0.81
COL27A1-207ENST00000494090 SYCE1LA8MT33 242 aa20.11■□□□□ 0.81
COL27A1-207ENST00000494090 SMAPO00193 183 aa20.11■□□□□ 0.81
COL27A1-207ENST00000494090 NR3C2P08235 984 aa20.11■□□□□ 0.81
COL27A1-207ENST00000494090 ACADSBP45954 432 aa20.11■□□□□ 0.81
COL27A1-207ENST00000494090 IRAK1P51617 712 aa20.11■□□□□ 0.81
COL27A1-207ENST00000494090 CENPCQ03188 943 aa20.11■□□□□ 0.81
COL27A1-207ENST00000494090 ZNF677Q86XU0 584 aa20.11■□□□□ 0.81
COL27A1-207ENST00000494090 ARHGAP18Q8N392 663 aa20.11■□□□□ 0.81
COL27A1-207ENST00000494090 OSBPL1AQ9BXW6 950 aa20.11■□□□□ 0.81
COL27A1-207ENST00000494090 MRGBPQ9NV56 204 aa20.11■□□□□ 0.81
COL27A1-207ENST00000494090 GRIN3BO60391 1043 aa20.1■□□□□ 0.81
COL27A1-207ENST00000494090 ABCE1P61221 599 aaKnown RBP20.1■□□□□ 0.81
COL27A1-207ENST00000494090 ST8SIA6P61647 398 aa20.1■□□□□ 0.81
COL27A1-207ENST00000494090 THEMIS2Q5TEJ8 643 aa20.1■□□□□ 0.81
COL27A1-207ENST00000494090 TEKT4Q8WW24 435 aa20.1■□□□□ 0.81
COL27A1-207ENST00000494090 FAM129AQ9BZQ8 928 aa20.1■□□□□ 0.81
COL27A1-207ENST00000494090 AIPL1Q9NZN9 384 aa20.1■□□□□ 0.81
COL27A1-207ENST00000494090 GTF2H3Q13889 308 aa20.1■□□□□ 0.81
COL27A1-207ENST00000494090 HIC1Q14526 733 aa20.1■□□□□ 0.81
COL27A1-207ENST00000494090 CHST13Q8NET6 341 aa20.1■□□□□ 0.81
COL27A1-207ENST00000494090 OLFM3Q96PB7 478 aa20.1■□□□□ 0.81
COL27A1-207ENST00000494090 MXRA8Q9BRK3 442 aa20.1■□□□□ 0.81
COL27A1-207ENST00000494090 ZFYVE28Q9HCC9 887 aa20.1■□□□□ 0.81
COL27A1-207ENST00000494090 ZC3H13Q5T200 1668 aaKnown RBP20.1■□□□□ 0.81
COL27A1-207ENST00000494090 GPR75-ASB3A0A0A6YYF3 556 aa20.1■□□□□ 0.81
COL27A1-207ENST00000494090 RNF103-CHMP3A0A140T963 221 aa20.1■□□□□ 0.81
COL27A1-207ENST00000494090 OCA2Q04671 838 aa20.1■□□□□ 0.81
COL27A1-207ENST00000494090 TMEM143Q96AN5 459 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms