RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 HASPINQ8TF76 798 aa20.86■□□□□ 0.93
USP39-218ENST00000493829 CPLX3Q8WVH0 158 aa20.86■□□□□ 0.93
USP39-218ENST00000493829 FAM193BQ96PV7 902 aaPredicted RBP20.86■□□□□ 0.93
USP39-218ENST00000493829 TSPAN18Q96SJ8 248 aa20.86■□□□□ 0.93
USP39-218ENST00000493829 DNAJB4Q9UDY4 337 aa20.86■□□□□ 0.93
USP39-218ENST00000493829 AJAP1Q9UKB5 411 aaPredicted RBP20.86■□□□□ 0.93
USP39-218ENST00000493829 SLC4A7Q9Y6M7 1214 aa20.86■□□□□ 0.93
USP39-218ENST00000493829 H0YGN5 161 aa20.85■□□□□ 0.93
USP39-218ENST00000493829 PODXLO00592 558 aa20.85■□□□□ 0.93
USP39-218ENST00000493829 PMM2O15305 246 aa20.85■□□□□ 0.93
USP39-218ENST00000493829 ZC3H11AO75152 810 aaKnown RBP eCLIP20.85■□□□□ 0.93
USP39-218ENST00000493829 CYP3A5P20815 502 aa20.85■□□□□ 0.93
USP39-218ENST00000493829 IGFBP6P24592 240 aaPredicted RBP20.85■□□□□ 0.93
USP39-218ENST00000493829 CDC25BP30305 580 aa20.85■□□□□ 0.93
USP39-218ENST00000493829 WDR44Q5JSH3 913 aa20.85■□□□□ 0.93
USP39-218ENST00000493829 RRAGAQ7L523 313 aa20.85■□□□□ 0.93
USP39-218ENST00000493829 LRRC43Q8N309 656 aa20.85■□□□□ 0.93
USP39-218ENST00000493829 CCDC150Q8NCX0 1101 aa20.85■□□□□ 0.93
USP39-218ENST00000493829 HPDLQ96IR7 371 aa20.85■□□□□ 0.93
USP39-218ENST00000493829 YME1L1Q96TA2 773 aa20.85■□□□□ 0.93
USP39-218ENST00000493829 APOBEC3GQ9HC16 384 aaKnown RBP20.85■□□□□ 0.93
USP39-218ENST00000493829 FHOD1Q9Y613 1164 aa20.85■□□□□ 0.93
USP39-218ENST00000493829 F8W810 466 aa20.84■□□□□ 0.93
USP39-218ENST00000493829 PBX3P40426 434 aa20.84■□□□□ 0.93
USP39-218ENST00000493829 GOLGA8FQ08AF8 430 aa20.84■□□□□ 0.93
USP39-218ENST00000493829 GOLGA8DPQ0D2H9 430 aa20.84■□□□□ 0.93
USP39-218ENST00000493829 PPM1KQ8N3J5 372 aa20.84■□□□□ 0.93
USP39-218ENST00000493829 KAT5Q92993 513 aa20.84■□□□□ 0.93
USP39-218ENST00000493829 TATDN2Q93075 761 aa20.84■□□□□ 0.93
USP39-218ENST00000493829 NT5C1BQ96P26 610 aa20.84■□□□□ 0.93
USP39-218ENST00000493829 ZBED2Q9BTP6 218 aa20.84■□□□□ 0.93
USP39-218ENST00000493829 MRPL9Q9BYD2 267 aaKnown RBP20.84■□□□□ 0.93
USP39-218ENST00000493829 XYLT2Q9H1B5 865 aa20.84■□□□□ 0.93
USP39-218ENST00000493829 GANQ9H2C0 597 aa20.84■□□□□ 0.93
USP39-218ENST00000493829 NLRC4Q9NPP4 1024 aa20.84■□□□□ 0.93
USP39-218ENST00000493829 KANSL3Q9P2N6 904 aa20.84■□□□□ 0.93
USP39-218ENST00000493829 NXF1Q9UBU9 619 aaKnown RBP20.84■□□□□ 0.93
USP39-218ENST00000493829 POLIQ9UNA4 740 aa20.84■□□□□ 0.93
USP39-218ENST00000493829 NUB1Q9Y5A7 615 aa20.84■□□□□ 0.93
USP39-218ENST00000493829 ITIH6Q6UXX5 1313 aa20.84■□□□□ 0.93
USP39-218ENST00000493829 NOL4O94818 638 aa20.83■□□□□ 0.93
USP39-218ENST00000493829 ASS1P00966 412 aaKnown RBP20.83■□□□□ 0.93
USP39-218ENST00000493829 OR1G1P47890 313 aa20.83■□□□□ 0.93
USP39-218ENST00000493829 POLR2FP61218 127 aaKnown RBP20.83■□□□□ 0.93
USP39-218ENST00000493829 RAPGEF1Q13905 1077 aa20.83■□□□□ 0.93
USP39-218ENST00000493829 KLHDC7AQ5VTJ3 777 aa20.83■□□□□ 0.93
USP39-218ENST00000493829 PHLDB3Q6NSJ2 640 aa20.83■□□□□ 0.93
USP39-218ENST00000493829 DPY19L2P1Q6NXN4 242 aa20.83■□□□□ 0.93
USP39-218ENST00000493829 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.83■□□□□ 0.93
USP39-218ENST00000493829 C3orf58Q8NDZ4 430 aa20.83■□□□□ 0.93
USP39-218ENST00000493829 RNPC3Q96LT9 517 aaKnown RBP20.83■□□□□ 0.93
USP39-218ENST00000493829 ARID3AQ99856 593 aa20.83■□□□□ 0.93
USP39-218ENST00000493829 MTIF3Q9H2K0 278 aaKnown RBP20.83■□□□□ 0.93
USP39-218ENST00000493829 APEX2Q9UBZ4 518 aa20.83■□□□□ 0.93
USP39-218ENST00000493829 PRG3Q9Y2Y8 225 aaPredicted RBP20.83■□□□□ 0.93
USP39-218ENST00000493829 ANO9A1A5B4 782 aa20.83■□□□□ 0.92
USP39-218ENST00000493829 GYPCP04921 128 aa20.83■□□□□ 0.92
USP39-218ENST00000493829 ATP2A2P16615 1042 aaKnown RBP20.83■□□□□ 0.92
USP39-218ENST00000493829 LRPAP1P30533 357 aa20.83■□□□□ 0.92
USP39-218ENST00000493829 SHHQ15465 462 aa20.83■□□□□ 0.92
USP39-218ENST00000493829 SGSM1Q2NKQ1 1148 aa20.83■□□□□ 0.92
USP39-218ENST00000493829 IQCEQ6IPM2 695 aa20.83■□□□□ 0.92
USP39-218ENST00000493829 ZNF560Q96MR9 790 aa20.83■□□□□ 0.92
USP39-218ENST00000493829 NRDE2Q9H7Z3 1164 aa20.83■□□□□ 0.92
USP39-218ENST00000493829 UBE2TQ9NPD8 197 aaPredicted RBP20.83■□□□□ 0.92
USP39-218ENST00000493829 SCN1AP35498 2009 aa20.82■□□□□ 0.92
USP39-218ENST00000493829 PIRO00625 290 aa20.82■□□□□ 0.92
USP39-218ENST00000493829 UCHL3P15374 230 aa20.82■□□□□ 0.92
USP39-218ENST00000493829 DSC1Q08554 894 aa20.82■□□□□ 0.92
USP39-218ENST00000493829 MYO1EQ12965 1108 aa20.82■□□□□ 0.92
USP39-218ENST00000493829 BTG3Q14201 252 aaPredicted RBP20.82■□□□□ 0.92
USP39-218ENST00000493829 UPP1Q16831 310 aa20.82■□□□□ 0.92
USP39-218ENST00000493829 ARHGAP44Q17R89 818 aa20.82■□□□□ 0.92
USP39-218ENST00000493829 WDR72Q3MJ13 1102 aa20.82■□□□□ 0.92
USP39-218ENST00000493829 SPOUT1Q5T280 376 aaKnown RBP20.82■□□□□ 0.92
USP39-218ENST00000493829 PPFIBP1Q86W92 1011 aa20.82■□□□□ 0.92
USP39-218ENST00000493829 COLGALT2Q8IYK4 626 aa20.82■□□□□ 0.92
USP39-218ENST00000493829 SLC9A7Q96T83 725 aa20.82■□□□□ 0.92
USP39-218ENST00000493829 UBE2OQ9C0C9 1292 aaKnown RBP20.82■□□□□ 0.92
USP39-218ENST00000493829 RC3H2Q9HBD1 1191 aaKnown RBP20.82■□□□□ 0.92
USP39-218ENST00000493829 PLCB1Q9NQ66 1216 aa20.82■□□□□ 0.92
USP39-218ENST00000493829 DNAJC12Q9UKB3 198 aa20.82■□□□□ 0.92
USP39-218ENST00000493829 TNRC18O15417 2968 aaPredicted RBP20.82■□□□□ 0.92
USP39-218ENST00000493829 SPTLC1O15269 473 aa20.81■□□□□ 0.92
USP39-218ENST00000493829 KIF4AO95239 1232 aa20.81■□□□□ 0.92
USP39-218ENST00000493829 GJB5O95377 273 aa20.81■□□□□ 0.92
USP39-218ENST00000493829 PNMA6AP0CW24 399 aaPredicted RBP20.81■□□□□ 0.92
USP39-218ENST00000493829 RAP1GAPP47736 663 aa20.81■□□□□ 0.92
USP39-218ENST00000493829 ZNF667Q5HYK9 610 aa20.81■□□□□ 0.92
USP39-218ENST00000493829 CACNA2D4Q7Z3S7 1137 aa20.81■□□□□ 0.92
USP39-218ENST00000493829 HERC6Q8IVU3 1022 aa20.81■□□□□ 0.92
USP39-218ENST00000493829 LRRC52Q8N7C0 313 aa20.81■□□□□ 0.92
USP39-218ENST00000493829 ZNF689Q96CS4 500 aaPredicted RBP20.81■□□□□ 0.92
USP39-218ENST00000493829 NIF3L1Q9GZT8 377 aa20.81■□□□□ 0.92
USP39-218ENST00000493829 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.81■□□□□ 0.927e-6■■□□□ 12.1
USP39-218ENST00000493829 I3L4J1 428 aa20.8■□□□□ 0.92
USP39-218ENST00000493829 RNF225M0QZC1 329 aaPredicted RBP20.8■□□□□ 0.92
USP39-218ENST00000493829 B3GAT3O94766 335 aa20.8■□□□□ 0.92
USP39-218ENST00000493829 ITGB1P05556 798 aa20.8■□□□□ 0.92
USP39-218ENST00000493829 ATICP31939 592 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms