RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 CYFIP2Q96F07 1278 aa5.8□□□□□ -1.48
SMC4-223ENST00000493695 MANSC1Q9H8J5 431 aa5.8□□□□□ -1.48
SMC4-223ENST00000493695 INTS13Q9NVM9 706 aa5.8□□□□□ -1.48
SMC4-223ENST00000493695 FAM30AQ9NZY2 134 aa5.8□□□□□ -1.48
SMC4-223ENST00000493695 SCOCQ9UIL1 159 aa5.8□□□□□ -1.48
SMC4-223ENST00000493695 WNT6Q9Y6F9 365 aa5.8□□□□□ -1.48
SMC4-223ENST00000493695 MYBBP1AQ9BQG0 1328 aaKnown RBP5.79□□□□□ -1.48
SMC4-223ENST00000493695 COL3A1P02461 1466 aaPredicted RBP5.79□□□□□ -1.48
SMC4-223ENST00000493695 PROB1E7EW31 1015 aa5.79□□□□□ -1.48
SMC4-223ENST00000493695 IKBKBO14920 756 aa5.79□□□□□ -1.48
SMC4-223ENST00000493695 MPPED1O15442 326 aa5.79□□□□□ -1.48
SMC4-223ENST00000493695 GRIA3P42263 894 aa5.79□□□□□ -1.48
SMC4-223ENST00000493695 SLC5A3P53794 718 aa5.79□□□□□ -1.48
SMC4-223ENST00000493695 SEPT2Q15019 361 aa5.79□□□□□ -1.48
SMC4-223ENST00000493695 ANO4Q32M45 955 aa5.79□□□□□ -1.48
SMC4-223ENST00000493695 CD300EQ496F6 205 aaPredicted RBP5.79□□□□□ -1.48
SMC4-223ENST00000493695 CT47A1Q5JQC4 288 aaPredicted RBP5.79□□□□□ -1.48
SMC4-223ENST00000493695 CLNKQ7Z7G1 428 aa5.79□□□□□ -1.48
SMC4-223ENST00000493695 RHOT1Q8IXI2 618 aa5.79□□□□□ -1.48
SMC4-223ENST00000493695 HOXB13Q92826 284 aaPredicted RBP5.79□□□□□ -1.48
SMC4-223ENST00000493695 C14orf119Q9NWQ9 140 aa5.79□□□□□ -1.48
SMC4-223ENST00000493695 ENTPD2Q9Y5L3 495 aa5.79□□□□□ -1.48
SMC4-223ENST00000493695 NR2E3Q9Y5X4 410 aa5.79□□□□□ -1.48
SMC4-223ENST00000493695 CGB1A6NKQ9 187 aa5.78□□□□□ -1.48
SMC4-223ENST00000493695 FAM171A2A8MVW0 826 aa5.78□□□□□ -1.48
SMC4-223ENST00000493695 CTGFP29279 349 aa5.78□□□□□ -1.48
SMC4-223ENST00000493695 TMPRSS15P98073 1019 aa5.78□□□□□ -1.48
SMC4-223ENST00000493695 MTM1Q13496 603 aa5.78□□□□□ -1.48
SMC4-223ENST00000493695 TMEM119Q4V9L6 283 aa5.78□□□□□ -1.48
SMC4-223ENST00000493695 KIAA1614Q5VZ46 1190 aa5.78□□□□□ -1.48
SMC4-223ENST00000493695 VWA1Q6PCB0 445 aa5.78□□□□□ -1.48
SMC4-223ENST00000493695 KCNK18Q7Z418 384 aa5.78□□□□□ -1.48
SMC4-223ENST00000493695 JAZF1Q86VZ6 243 aa5.78□□□□□ -1.48
SMC4-223ENST00000493695 NLGN4YQ8NFZ3 816 aaPredicted RBP5.78□□□□□ -1.48
SMC4-223ENST00000493695 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.78□□□□□ -1.48
SMC4-223ENST00000493695 HASPINQ8TF76 798 aa5.78□□□□□ -1.48
SMC4-223ENST00000493695 SARAFQ96BY9 339 aa5.78□□□□□ -1.48
SMC4-223ENST00000493695 HAPLN3Q96S86 360 aa5.78□□□□□ -1.48
SMC4-223ENST00000493695 C7orf25Q9BPX7 421 aa5.78□□□□□ -1.48
SMC4-223ENST00000493695 C11orf54Q9H0W9 315 aaPredicted RBP5.78□□□□□ -1.48
SMC4-223ENST00000493695 TOR1BO14657 336 aa5.77□□□□□ -1.49
SMC4-223ENST00000493695 AGFG2O95081 481 aa5.77□□□□□ -1.49
SMC4-223ENST00000493695 SLC6A9P48067 706 aa5.77□□□□□ -1.49
SMC4-223ENST00000493695 RPS7P62081 194 aaKnown RBP5.77□□□□□ -1.49
SMC4-223ENST00000493695 SLFN5Q08AF3 891 aa5.77□□□□□ -1.49
SMC4-223ENST00000493695 ZNF844Q08AG5 666 aa5.77□□□□□ -1.49
SMC4-223ENST00000493695 STRA8Q7Z7C7 330 aa5.77□□□□□ -1.49
SMC4-223ENST00000493695 KIAA0907Q7Z7F0 614 aaPredicted RBP5.77□□□□□ -1.49
SMC4-223ENST00000493695 RASAL3Q86YV0 1011 aa5.77□□□□□ -1.49
SMC4-223ENST00000493695 ZGPATQ8N5A5 531 aaKnown RBP5.77□□□□□ -1.49
SMC4-223ENST00000493695 PPM1NQ8N819 430 aa5.77□□□□□ -1.49
SMC4-223ENST00000493695 B3GALNT2Q8NCR0 500 aa5.77□□□□□ -1.49
SMC4-223ENST00000493695 LPIN2Q92539 896 aa5.77□□□□□ -1.49
SMC4-223ENST00000493695 DPF2Q92785 391 aa5.77□□□□□ -1.49
SMC4-223ENST00000493695 TIMP4Q99727 224 aa5.77□□□□□ -1.49
SMC4-223ENST00000493695 TLR10Q9BXR5 811 aa5.77□□□□□ -1.49
SMC4-223ENST00000493695 VTA1Q9NP79 307 aa5.77□□□□□ -1.49
SMC4-223ENST00000493695 ZNF70Q9UC06 446 aaPredicted RBP5.77□□□□□ -1.49
SMC4-223ENST00000493695 PRAMEF33A0A0G2JMD5 474 aa5.76□□□□□ -1.49
SMC4-223ENST00000493695 LINC00473A8K010 186 aa5.76□□□□□ -1.49
SMC4-223ENST00000493695 PRAMEF10O60809 474 aa5.76□□□□□ -1.49
SMC4-223ENST00000493695 HAUS5O94927 633 aa5.76□□□□□ -1.49
SMC4-223ENST00000493695 AMY1AP04745 511 aa5.76□□□□□ -1.49
SMC4-223ENST00000493695 PRKCGP05129 697 aa5.76□□□□□ -1.49
SMC4-223ENST00000493695 GATA3P23771 443 aa5.76□□□□□ -1.49
SMC4-223ENST00000493695 MGAT2Q10469 447 aa5.76□□□□□ -1.49
SMC4-223ENST00000493695 GRM1Q13255 1194 aa5.76□□□□□ -1.49
SMC4-223ENST00000493695 NBPF8Q3BBV2 869 aa5.76□□□□□ -1.49
SMC4-223ENST00000493695 UTP14CQ5TAP6 766 aaKnown RBP5.76□□□□□ -1.49
SMC4-223ENST00000493695 RSPH3Q86UC2 560 aa5.76□□□□□ -1.49
SMC4-223ENST00000493695 PDPRQ8NCN5 879 aa5.76□□□□□ -1.49
SMC4-223ENST00000493695 NSUN7Q8NE18 718 aaKnown RBP5.76□□□□□ -1.49
SMC4-223ENST00000493695 ANKS1AQ92625 1134 aa5.76□□□□□ -1.49
SMC4-223ENST00000493695 RAB24Q969Q5 203 aa5.76□□□□□ -1.49
SMC4-223ENST00000493695 AHCYL2Q96HN2 611 aaKnown RBP5.76□□□□□ -1.49
SMC4-223ENST00000493695 SLC2A13Q96QE2 648 aa5.76□□□□□ -1.49
SMC4-223ENST00000493695 INTUQ9ULD6 942 aa5.76□□□□□ -1.49
SMC4-223ENST00000493695 ADM5C9JUS6 153 aa5.75□□□□□ -1.49
SMC4-223ENST00000493695 CELA2AP08217 269 aa5.75□□□□□ -1.49
SMC4-223ENST00000493695 SRGNP10124 158 aa5.75□□□□□ -1.49
SMC4-223ENST00000493695 KCNA2P16389 499 aa5.75□□□□□ -1.49
SMC4-223ENST00000493695 GYS2P54840 703 aa5.75□□□□□ -1.49
SMC4-223ENST00000493695 KRTAP10-9P60411 292 aa5.75□□□□□ -1.49
SMC4-223ENST00000493695 FCRLBQ6BAA4 426 aa5.75□□□□□ -1.49
SMC4-223ENST00000493695 RNF180Q86T96 592 aa5.75□□□□□ -1.49
SMC4-223ENST00000493695 SNX19Q92543 992 aa5.75□□□□□ -1.49
SMC4-223ENST00000493695 DPF1Q92782 380 aa5.75□□□□□ -1.49
SMC4-223ENST00000493695 PGBD1Q96JS3 809 aa5.75□□□□□ -1.49
SMC4-223ENST00000493695 C1QTNF7Q9BXJ2 289 aa5.75□□□□□ -1.49
SMC4-223ENST00000493695 PADI4Q9UM07 663 aa5.75□□□□□ -1.49
SMC4-223ENST00000493695 A0A1W2PS29 197 aa5.74□□□□□ -1.49
SMC4-223ENST00000493695 BRINP1O60477 761 aa5.74□□□□□ -1.49
SMC4-223ENST00000493695 MTX3Q5HYI7 312 aa5.74□□□□□ -1.49
SMC4-223ENST00000493695 VGLL2Q8N8G2 317 aa5.74□□□□□ -1.49
SMC4-223ENST00000493695 OR2I1PQ8NGU4 316 aa5.74□□□□□ -1.49
SMC4-223ENST00000493695 MYCBPAPQ8TBZ2 947 aa5.74□□□□□ -1.49
SMC4-223ENST00000493695 TMX3Q96JJ7 454 aa5.74□□□□□ -1.49
SMC4-223ENST00000493695 CCM2LQ9NUG4 571 aaPredicted RBP5.74□□□□□ -1.49
SMC4-223ENST00000493695 PPP3CBP16298 524 aa5.73□□□□□ -1.49
SMC4-223ENST00000493695 WT1P19544 449 aaPredicted RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms