RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 MATR3P43243 847 aaKnown RBP eCLIP11.21□□□□□ -0.619e-6■■■■□ 23
NUDCD3-210ENST00000493613 ID4P47928 161 aa11.21□□□□□ -0.61
NUDCD3-210ENST00000493613 MRPL58Q14197 206 aaKnown RBP11.21□□□□□ -0.61
NUDCD3-210ENST00000493613 RABEP1Q15276 862 aa11.21□□□□□ -0.61
NUDCD3-210ENST00000493613 SLC10A6Q3KNW5 377 aa11.21□□□□□ -0.61
NUDCD3-210ENST00000493613 PRSS36Q5K4E3 855 aa11.21□□□□□ -0.61
NUDCD3-210ENST00000493613 HYIQ5T013 277 aa11.21□□□□□ -0.61
NUDCD3-210ENST00000493613 TPGS2Q68CL5 300 aa11.21□□□□□ -0.61
NUDCD3-210ENST00000493613 ZPBP2Q6X784 338 aa11.21□□□□□ -0.61
NUDCD3-210ENST00000493613 TPRG1Q6ZUI0 275 aa11.21□□□□□ -0.61
NUDCD3-210ENST00000493613 MAML2Q8IZL2 1156 aaPredicted RBP11.21□□□□□ -0.61
NUDCD3-210ENST00000493613 KCTD17Q8N5Z5 321 aa11.21□□□□□ -0.61
NUDCD3-210ENST00000493613 SYT2Q8N9I0 419 aaPredicted RBP11.21□□□□□ -0.61
NUDCD3-210ENST00000493613 TMEM161BQ8NDZ6 487 aa11.21□□□□□ -0.61
NUDCD3-210ENST00000493613 SPIRE2Q8WWL2 714 aa11.21□□□□□ -0.61
NUDCD3-210ENST00000493613 CDK5RAP3Q96JB5 506 aa11.21□□□□□ -0.61
NUDCD3-210ENST00000493613 SUSD3Q96L08 255 aa11.21□□□□□ -0.61
NUDCD3-210ENST00000493613 TBC1D32Q96NH3 1257 aa11.21□□□□□ -0.61
NUDCD3-210ENST00000493613 PNMA5Q96PV4 448 aa11.21□□□□□ -0.61
NUDCD3-210ENST00000493613 HINFPQ9BQA5 517 aa11.21□□□□□ -0.61
NUDCD3-210ENST00000493613 OSBPL6Q9BZF3 934 aa11.21□□□□□ -0.61
NUDCD3-210ENST00000493613 PLA2G2FQ9BZM2 168 aa11.21□□□□□ -0.61
NUDCD3-210ENST00000493613 LTB4R2Q9NPC1 389 aa11.21□□□□□ -0.61
NUDCD3-210ENST00000493613 SPATA6Q9NWH7 488 aaPredicted RBP11.21□□□□□ -0.61
NUDCD3-210ENST00000493613 TUBGCP4Q9UGJ1 667 aa11.21□□□□□ -0.61
NUDCD3-210ENST00000493613 RALGAPA1Q6GYQ0 2036 aa11.21□□□□□ -0.62
NUDCD3-210ENST00000493613 H3BQV1 296 aa11.2□□□□□ -0.62
NUDCD3-210ENST00000493613 ZNF197O14709 1029 aa11.2□□□□□ -0.62
NUDCD3-210ENST00000493613 LAMTOR5O43504 91 aa11.2□□□□□ -0.62
NUDCD3-210ENST00000493613 CXCL8P10145 99 aa11.2□□□□□ -0.62
NUDCD3-210ENST00000493613 CPB1P15086 417 aa11.2□□□□□ -0.62
NUDCD3-210ENST00000493613 MAGEA9P43362 315 aa11.2□□□□□ -0.62
NUDCD3-210ENST00000493613 SLC12A3P55017 1021 aa11.2□□□□□ -0.62
NUDCD3-210ENST00000493613 MCL1Q07820 350 aa11.2□□□□□ -0.62
NUDCD3-210ENST00000493613 ADCY1Q08828 1119 aa11.2□□□□□ -0.62
NUDCD3-210ENST00000493613 ZBTB41Q5SVQ8 909 aa11.2□□□□□ -0.62
NUDCD3-210ENST00000493613 TANGO2Q6ICL3 276 aa11.2□□□□□ -0.62
NUDCD3-210ENST00000493613 ZNF280DQ6N043 979 aa11.2□□□□□ -0.62
NUDCD3-210ENST00000493613 POTEHQ6S545 545 aa11.2□□□□□ -0.62
NUDCD3-210ENST00000493613 PDZD4Q76G19 769 aaPredicted RBP11.2□□□□□ -0.62
NUDCD3-210ENST00000493613 ERMP1Q7Z2K6 904 aa11.2□□□□□ -0.62
NUDCD3-210ENST00000493613 KIAA2013Q8IYS2 634 aa11.2□□□□□ -0.62
NUDCD3-210ENST00000493613 ELMOD1Q8N336 334 aa11.2□□□□□ -0.62
NUDCD3-210ENST00000493613 APPL2Q8NEU8 664 aa11.2□□□□□ -0.62
NUDCD3-210ENST00000493613 DDX12PQ92771 950 aa11.2□□□□□ -0.62
NUDCD3-210ENST00000493613 ELSPBP1Q96BH3 223 aa11.2□□□□□ -0.62
NUDCD3-210ENST00000493613 TCEAL4Q96EI5 215 aa11.2□□□□□ -0.62
NUDCD3-210ENST00000493613 BICD1Q96G01 975 aa11.2□□□□□ -0.62
NUDCD3-210ENST00000493613 HEBP1Q9NRV9 189 aa11.2□□□□□ -0.62
NUDCD3-210ENST00000493613 KCND2Q9NZV8 630 aa11.2□□□□□ -0.62
NUDCD3-210ENST00000493613 LARSQ9P2J5 1176 aaKnown RBP11.2□□□□□ -0.62
NUDCD3-210ENST00000493613 FBXO4Q9UKT5 387 aa11.2□□□□□ -0.62
NUDCD3-210ENST00000493613 CACNA1AO00555 2505 aa11.2□□□□□ -0.62
NUDCD3-210ENST00000493613 EP300Q09472 2414 aaPredicted RBP11.2□□□□□ -0.62
NUDCD3-210ENST00000493613 OTOGLQ3ZCN5 2332 aa11.19□□□□□ -0.62
NUDCD3-210ENST00000493613 NPHP3-ACAD11A0A0J9YXS1 232 aa11.19□□□□□ -0.62
NUDCD3-210ENST00000493613 H0YCG3 227 aa11.19□□□□□ -0.62
NUDCD3-210ENST00000493613 NCAM2O15394 837 aa11.19□□□□□ -0.62
NUDCD3-210ENST00000493613 KINO60870 393 aaKnown RBP11.19□□□□□ -0.62
NUDCD3-210ENST00000493613 MICAL2O94851 1124 aa11.19□□□□□ -0.62
NUDCD3-210ENST00000493613 PLA2G4BP0C869 781 aa11.19□□□□□ -0.62
NUDCD3-210ENST00000493613 FCARP24071 287 aa11.19□□□□□ -0.62
NUDCD3-210ENST00000493613 TARSP26639 723 aaKnown RBP11.19□□□□□ -0.62
NUDCD3-210ENST00000493613 MARCKSP29966 332 aaPredicted RBP11.19□□□□□ -0.62
NUDCD3-210ENST00000493613 CCR2P41597 374 aa11.19□□□□□ -0.62
NUDCD3-210ENST00000493613 NCKAP1LP55160 1127 aa11.19□□□□□ -0.62
NUDCD3-210ENST00000493613 CACNB1Q02641 598 aaPredicted RBP11.19□□□□□ -0.62
NUDCD3-210ENST00000493613 YWHAHQ04917 246 aaPredicted RBP11.19□□□□□ -0.62
NUDCD3-210ENST00000493613 PPP2R3AQ06190 1150 aa11.19□□□□□ -0.62
NUDCD3-210ENST00000493613 SPAG1Q07617 926 aa11.19□□□□□ -0.62
NUDCD3-210ENST00000493613 GRM2Q14416 872 aa11.19□□□□□ -0.62
NUDCD3-210ENST00000493613 ZNF528Q3MIS6 628 aa11.19□□□□□ -0.62
NUDCD3-210ENST00000493613 FAM78AQ5JUQ0 283 aa11.19□□□□□ -0.62
NUDCD3-210ENST00000493613 CYP4A22Q5TCH4 519 aa11.19□□□□□ -0.62
NUDCD3-210ENST00000493613 IQCEQ6IPM2 695 aa11.19□□□□□ -0.62
NUDCD3-210ENST00000493613 ZNF852Q6ZMS4 543 aa11.19□□□□□ -0.62
NUDCD3-210ENST00000493613 RNF19BQ6ZMZ0 732 aa11.19□□□□□ -0.62
NUDCD3-210ENST00000493613 DNASE1L2Q92874 299 aa11.19□□□□□ -0.62
NUDCD3-210ENST00000493613 TMX3Q96JJ7 454 aa11.19□□□□□ -0.62
NUDCD3-210ENST00000493613 ZNF512Q96ME7 567 aaPredicted RBP11.19□□□□□ -0.62
NUDCD3-210ENST00000493613 NELL2Q99435 816 aa11.19□□□□□ -0.62
NUDCD3-210ENST00000493613 HAPLN2Q9GZV7 340 aa11.19□□□□□ -0.62
NUDCD3-210ENST00000493613 BRD9Q9H8M2 597 aa11.19□□□□□ -0.62
NUDCD3-210ENST00000493613 PLEKHA5Q9HAU0 1116 aa11.19□□□□□ -0.62
NUDCD3-210ENST00000493613 ZFP14Q9HCL3 533 aa11.19□□□□□ -0.62
NUDCD3-210ENST00000493613 AFF4Q9UHB7 1163 aaKnown RBP11.19□□□□□ -0.62
NUDCD3-210ENST00000493613 MAFFQ9ULX9 164 aa11.19□□□□□ -0.62
NUDCD3-210ENST00000493613 PCDHB8Q9UN66 801 aa11.19□□□□□ -0.62
NUDCD3-210ENST00000493613 TTC26A0AVF1 554 aa11.18□□□□□ -0.62
NUDCD3-210ENST00000493613 M0QZQ0 153 aa11.18□□□□□ -0.62
NUDCD3-210ENST00000493613 HNRNPDLO14979 420 aaKnown RBP11.18□□□□□ -0.62
NUDCD3-210ENST00000493613 CLTAP09496 248 aa11.18□□□□□ -0.62
NUDCD3-210ENST00000493613 MYL4P12829 197 aa11.18□□□□□ -0.62
NUDCD3-210ENST00000493613 GJB2P29033 226 aa11.18□□□□□ -0.62
NUDCD3-210ENST00000493613 TNFSF9P41273 254 aa11.18□□□□□ -0.62
NUDCD3-210ENST00000493613 RPS9P46781 194 aaKnown RBP11.18□□□□□ -0.62
NUDCD3-210ENST00000493613 LIG4P49917 911 aa11.18□□□□□ -0.62
NUDCD3-210ENST00000493613 CSTF1Q05048 431 aaKnown RBP11.18□□□□□ -0.62
NUDCD3-210ENST00000493613 TWF1Q12792 350 aa11.18□□□□□ -0.62
NUDCD3-210ENST00000493613 TMEM119Q4V9L6 283 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms