RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 KIF26AQ9ULI4 1882 aaPredicted RBP15.66■□□□□ 0.1
PRPF40A-211ENST00000493468 CCDC163A0A0D9SF12 145 aa15.66■□□□□ 0.1
PRPF40A-211ENST00000493468 MYBPHLA2RUH7 354 aa15.66■□□□□ 0.1
PRPF40A-211ENST00000493468 HEPACAM2A8MVW5 462 aa15.66■□□□□ 0.1
PRPF40A-211ENST00000493468 NAMPTP43490 491 aa15.66■□□□□ 0.1
PRPF40A-211ENST00000493468 RAP1GAPP47736 663 aa15.66■□□□□ 0.1
PRPF40A-211ENST00000493468 XKR4Q5GH76 650 aa15.66■□□□□ 0.1
PRPF40A-211ENST00000493468 WDR44Q5JSH3 913 aa15.66■□□□□ 0.1
PRPF40A-211ENST00000493468 EEF1DP3Q658K8 133 aa15.66■□□□□ 0.1
PRPF40A-211ENST00000493468 Q6ZS52 159 aa15.66■□□□□ 0.1
PRPF40A-211ENST00000493468 RUFY3Q7L099 469 aa15.66■□□□□ 0.1
PRPF40A-211ENST00000493468 APBB1IPQ7Z5R6 666 aaPredicted RBP15.66■□□□□ 0.1
PRPF40A-211ENST00000493468 RALGPS2Q86X27 583 aaPredicted RBP15.66■□□□□ 0.1
PRPF40A-211ENST00000493468 ZNF512Q96ME7 567 aaPredicted RBP15.66■□□□□ 0.1
PRPF40A-211ENST00000493468 GOLGA2P5Q9HBQ8 144 aa15.66■□□□□ 0.1
PRPF40A-211ENST00000493468 RBM12Q9NTZ6 932 aaKnown RBP15.66■□□□□ 0.1
PRPF40A-211ENST00000493468 AFF4Q9UHB7 1163 aaKnown RBP15.66■□□□□ 0.1
PRPF40A-211ENST00000493468 RALYQ9UKM9 306 aaKnown RBP15.66■□□□□ 0.1
PRPF40A-211ENST00000493468 PCDHGA5Q9Y5G8 931 aa15.66■□□□□ 0.1
PRPF40A-211ENST00000493468 ZFYVE26Q68DK2 2539 aa15.66■□□□□ 0.1
PRPF40A-211ENST00000493468 SMIM28A0A1B0GU29 152 aa15.65■□□□□ 0.1
PRPF40A-211ENST00000493468 CDKL5O76039 1030 aa15.65■□□□□ 0.1
PRPF40A-211ENST00000493468 EDN1P05305 212 aa15.65■□□□□ 0.1
PRPF40A-211ENST00000493468 CTHP32929 405 aa15.65■□□□□ 0.1
PRPF40A-211ENST00000493468 COL9A2Q14055 689 aaPredicted RBP15.65■□□□□ 0.1
PRPF40A-211ENST00000493468 SF3A2Q15428 464 aaKnown RBP15.65■□□□□ 0.1
PRPF40A-211ENST00000493468 CALCRLQ16602 461 aa15.65■□□□□ 0.1
PRPF40A-211ENST00000493468 EARS2Q5JPH6 523 aaKnown RBP15.65■□□□□ 0.1
PRPF40A-211ENST00000493468 PLA2G2CQ5R387 149 aa15.65■□□□□ 0.1
PRPF40A-211ENST00000493468 STPG1Q5TH74 334 aa15.65■□□□□ 0.1
PRPF40A-211ENST00000493468 HEATR6Q6AI08 1181 aaKnown RBP15.65■□□□□ 0.1
PRPF40A-211ENST00000493468 YAF2Q8IY57 180 aa15.65■□□□□ 0.1
PRPF40A-211ENST00000493468 HS6ST3Q8IZP7 471 aa15.65■□□□□ 0.1
PRPF40A-211ENST00000493468 OXER1Q8TDS5 423 aa15.65■□□□□ 0.1
PRPF40A-211ENST00000493468 GAB3Q8WWW8 586 aa15.65■□□□□ 0.1
PRPF40A-211ENST00000493468 BSNDQ8WZ55 320 aa15.65■□□□□ 0.1
PRPF40A-211ENST00000493468 LSM14BQ9BX40 385 aaKnown RBP15.65■□□□□ 0.1
PRPF40A-211ENST00000493468 ARRDC1-AS1Q9H2J1 176 aa15.65■□□□□ 0.1
PRPF40A-211ENST00000493468 TTC12Q9H892 705 aaPredicted RBP15.65■□□□□ 0.1
PRPF40A-211ENST00000493468 ZSWIM6Q9HCJ5 1215 aa15.65■□□□□ 0.1
PRPF40A-211ENST00000493468 SH2B1Q9NRF2 756 aaPredicted RBP15.65■□□□□ 0.1
PRPF40A-211ENST00000493468 SLC38A7Q9NVC3 462 aa15.65■□□□□ 0.1
PRPF40A-211ENST00000493468 CEP72Q9P209 647 aa15.65■□□□□ 0.1
PRPF40A-211ENST00000493468 FBXL5Q9UKA1 691 aa15.65■□□□□ 0.1
PRPF40A-211ENST00000493468 IGF2RP11717 2491 aa15.65■□□□□ 0.1
PRPF40A-211ENST00000493468 SPECC1L-ADORA2AF8WAN1 911 aa15.64■□□□□ 0.09
PRPF40A-211ENST00000493468 PODXLO00592 558 aa15.64■□□□□ 0.09
PRPF40A-211ENST00000493468 AKAP3O75969 853 aa15.64■□□□□ 0.09
PRPF40A-211ENST00000493468 KCNK5O95279 499 aa15.64■□□□□ 0.09
PRPF40A-211ENST00000493468 ATP2B1P20020 1258 aa15.64■□□□□ 0.09
PRPF40A-211ENST00000493468 KPNA1P52294 538 aaPredicted RBP15.64■□□□□ 0.09
PRPF40A-211ENST00000493468 EFNA5P52803 228 aa15.64■□□□□ 0.09
PRPF40A-211ENST00000493468 SOX4Q06945 474 aaPredicted RBP15.64■□□□□ 0.09
PRPF40A-211ENST00000493468 TWF1Q12792 350 aa15.64■□□□□ 0.09
PRPF40A-211ENST00000493468 CCINQ13939 588 aa15.64■□□□□ 0.09
PRPF40A-211ENST00000493468 PPP2R5AQ15172 486 aa15.64■□□□□ 0.09
PRPF40A-211ENST00000493468 ALKAL1Q6UXT8 129 aa15.64■□□□□ 0.09
PRPF40A-211ENST00000493468 MAEAQ7L5Y9 396 aa15.64■□□□□ 0.09
PRPF40A-211ENST00000493468 CACNA2D4Q7Z3S7 1137 aa15.64■□□□□ 0.09
PRPF40A-211ENST00000493468 DEPTORQ8TB45 409 aa15.64■□□□□ 0.09
PRPF40A-211ENST00000493468 SHKBP1Q8TBC3 707 aa15.64■□□□□ 0.09
PRPF40A-211ENST00000493468 TUFT1Q9NNX1 390 aa15.64■□□□□ 0.09
PRPF40A-211ENST00000493468 TOPORSQ9NS56 1045 aaPredicted RBP15.64■□□□□ 0.09
PRPF40A-211ENST00000493468 C2orf42Q9NWW7 574 aa15.64■□□□□ 0.09
PRPF40A-211ENST00000493468 FASNP49327 2511 aaKnown RBP15.63■□□□□ 0.09
PRPF40A-211ENST00000493468 SLC38A8A6NNN8 435 aa15.63■□□□□ 0.09
PRPF40A-211ENST00000493468 AXIN1O15169 862 aa15.63■□□□□ 0.09
PRPF40A-211ENST00000493468 SPATA31C1P0DKV0 1188 aa15.63■□□□□ 0.09
PRPF40A-211ENST00000493468 MYL4P12829 197 aa15.63■□□□□ 0.09
PRPF40A-211ENST00000493468 GRM5P41594 1212 aa15.63■□□□□ 0.09
PRPF40A-211ENST00000493468 ARPP19P56211 112 aa15.63■□□□□ 0.09
PRPF40A-211ENST00000493468 TEAD2Q15562 447 aa15.63■□□□□ 0.09
PRPF40A-211ENST00000493468 CTXN3Q4LDR2 81 aa15.63■□□□□ 0.09
PRPF40A-211ENST00000493468 ATF7IP2Q5U623 682 aa15.63■□□□□ 0.09
PRPF40A-211ENST00000493468 ZNF280DQ6N043 979 aa15.63■□□□□ 0.09
PRPF40A-211ENST00000493468 TXNDC11Q6PKC3 985 aa15.63■□□□□ 0.09
PRPF40A-211ENST00000493468 UNQ6494/PRO21346Q6UXR6 183 aa15.63■□□□□ 0.09
PRPF40A-211ENST00000493468 KDF1Q8NAX2 398 aaPredicted RBP15.63■□□□□ 0.09
PRPF40A-211ENST00000493468 TNFRSF25Q93038 417 aa15.63■□□□□ 0.09
PRPF40A-211ENST00000493468 RSPRY1Q96DX4 576 aa15.63■□□□□ 0.09
PRPF40A-211ENST00000493468 RXFP3Q9NSD7 469 aa15.63■□□□□ 0.09
PRPF40A-211ENST00000493468 OBP2AQ9NY56 170 aa15.63■□□□□ 0.09
PRPF40A-211ENST00000493468 USP20Q9Y2K6 914 aa15.63■□□□□ 0.09
PRPF40A-211ENST00000493468 FAM205CA6NFA0 338 aa15.62■□□□□ 0.09
PRPF40A-211ENST00000493468 RPP40O75818 363 aaKnown RBP15.62■□□□□ 0.09
PRPF40A-211ENST00000493468 GJA1P17302 382 aa15.62■□□□□ 0.09
PRPF40A-211ENST00000493468 CYP11B2P19099 503 aa15.62■□□□□ 0.09
PRPF40A-211ENST00000493468 RPL9P32969 192 aaKnown RBP15.62■□□□□ 0.09
PRPF40A-211ENST00000493468 SOX9P48436 509 aa15.62■□□□□ 0.09
PRPF40A-211ENST00000493468 YARSP54577 528 aaKnown RBP15.62■□□□□ 0.09
PRPF40A-211ENST00000493468 ACAP1Q15027 740 aa15.62■□□□□ 0.09
PRPF40A-211ENST00000493468 ARHGAP29Q52LW3 1261 aa15.62■□□□□ 0.09
PRPF40A-211ENST00000493468 NT5DC1Q5TFE4 455 aa15.62■□□□□ 0.09
PRPF40A-211ENST00000493468 BEST2Q8NFU1 509 aa15.62■□□□□ 0.09
PRPF40A-211ENST00000493468 FAM200AQ8TCP9 573 aa15.62■□□□□ 0.09
PRPF40A-211ENST00000493468 SUSD3Q96L08 255 aa15.62■□□□□ 0.09
PRPF40A-211ENST00000493468 MTMR9Q96QG7 549 aa15.62■□□□□ 0.09
PRPF40A-211ENST00000493468 NACC1Q96RE7 527 aa15.62■□□□□ 0.09
PRPF40A-211ENST00000493468 CCDC94Q9BW85 323 aaPredicted RBP15.62■□□□□ 0.09
PRPF40A-211ENST00000493468 LRRC3Q9BY71 257 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms