RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 PCDHA3Q9Y5H8 950 aa16.13■□□□□ 0.17
TNFRSF1B-203ENST00000492361 NOP56O00567 594 aaKnown RBP16.12■□□□□ 0.17
TNFRSF1B-203ENST00000492361 DHX15O43143 795 aaKnown RBP16.12■□□□□ 0.17
TNFRSF1B-203ENST00000492361 PSAPP07602 524 aa16.12■□□□□ 0.17
TNFRSF1B-203ENST00000492361 HSPA6P17066 643 aa16.12■□□□□ 0.17
TNFRSF1B-203ENST00000492361 KRT76Q01546 638 aa16.12■□□□□ 0.17
TNFRSF1B-203ENST00000492361 FAXCQ5TGI0 409 aa16.12■□□□□ 0.17
TNFRSF1B-203ENST00000492361 PPP1R21Q6ZMI0 780 aa16.12■□□□□ 0.17
TNFRSF1B-203ENST00000492361 MCOLN2Q8IZK6 566 aa16.12■□□□□ 0.17
TNFRSF1B-203ENST00000492361 HELQQ8TDG4 1101 aa16.12■□□□□ 0.17
TNFRSF1B-203ENST00000492361 TRAPPC12Q8WVT3 735 aa16.12■□□□□ 0.17
TNFRSF1B-203ENST00000492361 MTMR12Q9C0I1 747 aa16.12■□□□□ 0.17
TNFRSF1B-203ENST00000492361 DNPEPQ9ULA0 475 aa16.12■□□□□ 0.17
TNFRSF1B-203ENST00000492361 DIS3Q9Y2L1 958 aaKnown RBP16.12■□□□□ 0.17
TNFRSF1B-203ENST00000492361 IKBKGQ9Y6K9 419 aa16.12■□□□□ 0.17
TNFRSF1B-203ENST00000492361 SYNJ2BP-COX16A0A087WUM0 186 aa16.12■□□□□ 0.17
TNFRSF1B-203ENST00000492361 AGTP01019 485 aa16.12■□□□□ 0.17
TNFRSF1B-203ENST00000492361 HOXA7P31268 230 aaPredicted RBP16.12■□□□□ 0.17
TNFRSF1B-203ENST00000492361 PEX5P50542 639 aa16.12■□□□□ 0.17
TNFRSF1B-203ENST00000492361 ZC3H3Q8IXZ2 948 aaKnown RBP16.12■□□□□ 0.17
TNFRSF1B-203ENST00000492361 SHC3Q92529 594 aa16.12■□□□□ 0.17
TNFRSF1B-203ENST00000492361 TMEM237Q96Q45 408 aa16.12■□□□□ 0.17
TNFRSF1B-203ENST00000492361 COX16Q9P0S2 106 aa16.12■□□□□ 0.17
TNFRSF1B-203ENST00000492361 TMEM191BP0C7N4 346 aa16.12■□□□□ 0.17
TNFRSF1B-203ENST00000492361 DSG3P32926 999 aa16.12■□□□□ 0.17
TNFRSF1B-203ENST00000492361 TNFSF9P41273 254 aa16.12■□□□□ 0.17
TNFRSF1B-203ENST00000492361 CDH8P55286 799 aa16.12■□□□□ 0.17
TNFRSF1B-203ENST00000492361 NCOA4Q13772 614 aa16.12■□□□□ 0.17
TNFRSF1B-203ENST00000492361 ATL2Q8NHH9 583 aa16.12■□□□□ 0.17
TNFRSF1B-203ENST00000492361 RSAD2Q8WXG1 361 aa16.12■□□□□ 0.17
TNFRSF1B-203ENST00000492361 CLEC4DQ8WXI8 215 aa16.12■□□□□ 0.17
TNFRSF1B-203ENST00000492361 MYBL1P10243 752 aa16.11■□□□□ 0.17
TNFRSF1B-203ENST00000492361 FSTL1Q12841 308 aa16.11■□□□□ 0.17
TNFRSF1B-203ENST00000492361 PALM2Q8IXS6 379 aa16.11■□□□□ 0.17
TNFRSF1B-203ENST00000492361 STAMBPL1Q96FJ0 436 aa16.11■□□□□ 0.17
TNFRSF1B-203ENST00000492361 NEU2Q9Y3R4 380 aa16.11■□□□□ 0.17
TNFRSF1B-203ENST00000492361 IVNS1ABPQ9Y6Y0 642 aa16.11■□□□□ 0.17
TNFRSF1B-203ENST00000492361 A0A0G2JND7 137 aa16.11■□□□□ 0.17
TNFRSF1B-203ENST00000492361 CES2O00748 559 aa16.11■□□□□ 0.17
TNFRSF1B-203ENST00000492361 JAK3P52333 1124 aa16.11■□□□□ 0.17
TNFRSF1B-203ENST00000492361 CLEC16AQ2KHT3 1053 aa16.11■□□□□ 0.17
TNFRSF1B-203ENST00000492361 MFSD7Q6UXD7 560 aa16.11■□□□□ 0.17
TNFRSF1B-203ENST00000492361 MICALL2Q8IY33 904 aa16.11■□□□□ 0.17
TNFRSF1B-203ENST00000492361 SGSM3Q96HU1 749 aa16.11■□□□□ 0.17
TNFRSF1B-203ENST00000492361 ACTR5Q9H9F9 607 aaPredicted RBP16.11■□□□□ 0.17
TNFRSF1B-203ENST00000492361 MAGEA4P43358 317 aa16.11■□□□□ 0.17
TNFRSF1B-203ENST00000492361 YWHAGP61981 247 aaKnown RBP eCLIP16.11■□□□□ 0.17
TNFRSF1B-203ENST00000492361 POU5F1Q01860 360 aaKnown RBP16.11■□□□□ 0.17
TNFRSF1B-203ENST00000492361 SLC20A2Q08357 652 aa16.11■□□□□ 0.17
TNFRSF1B-203ENST00000492361 DRP2Q13474 957 aa16.11■□□□□ 0.17
TNFRSF1B-203ENST00000492361 EMC2Q15006 297 aa16.11■□□□□ 0.17
TNFRSF1B-203ENST00000492361 SETDB1Q15047 1291 aa16.11■□□□□ 0.17
TNFRSF1B-203ENST00000492361 CNGA2Q16280 664 aa16.11■□□□□ 0.17
TNFRSF1B-203ENST00000492361 RHPN2Q8IUC4 686 aa16.11■□□□□ 0.17
TNFRSF1B-203ENST00000492361 RHOT1Q8IXI2 618 aa16.11■□□□□ 0.17
TNFRSF1B-203ENST00000492361 RNF149Q8NC42 400 aa16.11■□□□□ 0.17
TNFRSF1B-203ENST00000492361 CYP26B1Q9NR63 512 aa16.11■□□□□ 0.17
TNFRSF1B-203ENST00000492361 NINJ2Q9NZG7 142 aa16.11■□□□□ 0.17
TNFRSF1B-203ENST00000492361 UVRAGQ9P2Y5 699 aa16.11■□□□□ 0.17
TNFRSF1B-203ENST00000492361 PCDHB2Q9Y5E7 798 aa16.11■□□□□ 0.17
TNFRSF1B-203ENST00000492361 NHSL1Q5SYE7 1610 aa16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 PSMA2P25787 234 aa16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 SPDYE2Q495Y8 402 aa16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 TDRD10Q5VZ19 366 aaKnown RBP16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 TXNRD3NBQ6F5E7 133 aa16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 C11orf63Q6NUN7 778 aa16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 GADL1Q6ZQY3 521 aa16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 RFX6Q8HWS3 928 aa16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 CNPY4Q8N129 248 aa16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 NSUN6Q8TEA1 469 aaKnown RBP16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 ZNF516Q92618 1163 aa16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 RPS6KC1Q96S38 1066 aa16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 PDE4DIPQ5VU43 2346 aa16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 FSBPO95073 299 aa16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 TARSP26639 723 aaKnown RBP16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 ANXA13P27216 316 aa16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 PEX19P40855 299 aa16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 MYL6P60660 151 aa16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 ATP11AP98196 1134 aa16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 GTF2BQ00403 316 aa16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 GNPTABQ3T906 1256 aa16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 MDH1BQ5I0G3 518 aa16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 SPATA21Q7Z572 469 aa16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 ERICH1Q86X53 443 aa16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 MICAL1Q8TDZ2 1067 aa16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 GRK7Q8WTQ7 553 aa16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 KCND2Q9NZV8 630 aa16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 ZNRF3Q9ULT6 936 aa16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 USP15Q9Y4E8 981 aaPredicted RBP16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 HEY1Q9Y5J3 304 aa16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 ZNF536O15090 1300 aa16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 ATP2A1O14983 1001 aa16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 SSTR1P30872 391 aa16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 ACCSLQ4AC99 568 aa16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 GPAT2Q6NUI2 795 aa16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 SLC39A4Q6P5W5 647 aa16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 FOXR2Q6PJQ5 311 aa16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 CEP120Q8N960 986 aa16.1■□□□□ 0.17
TNFRSF1B-203ENST00000492361 NETO2Q8NC67 525 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms