RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 KCNE1P15382 129 aa22.62■■□□□ 1.21
CLIP2-208ENST00000491075 GDI1P31150 447 aa22.62■■□□□ 1.21
CLIP2-208ENST00000491075 RPL9P32969 192 aaKnown RBP22.62■■□□□ 1.21
CLIP2-208ENST00000491075 OSTNP61366 133 aa22.62■■□□□ 1.21
CLIP2-208ENST00000491075 CTXN3Q4LDR2 81 aa22.62■■□□□ 1.21
CLIP2-208ENST00000491075 ZNF280DQ6N043 979 aa22.62■■□□□ 1.21
CLIP2-208ENST00000491075 ZMAT2Q96NC0 199 aaKnown RBP22.62■■□□□ 1.21
CLIP2-208ENST00000491075 MRPL4Q9BYD3 311 aaKnown RBP22.62■■□□□ 1.21
CLIP2-208ENST00000491075 POLD4Q9HCU8 107 aa22.62■■□□□ 1.21
CLIP2-208ENST00000491075 PTPRHQ9HD43 1115 aa22.62■■□□□ 1.21
CLIP2-208ENST00000491075 LRP3O75074 770 aa22.61■■□□□ 1.21
CLIP2-208ENST00000491075 CCT6AP40227 531 aaKnown RBP22.61■■□□□ 1.21
CLIP2-208ENST00000491075 RALGAPA1Q6GYQ0 2036 aa22.61■■□□□ 1.21
CLIP2-208ENST00000491075 SUSD3Q96L08 255 aa22.61■■□□□ 1.21
CLIP2-208ENST00000491075 ZNF512Q96ME7 567 aaPredicted RBP22.61■■□□□ 1.21
CLIP2-208ENST00000491075 ACAP3Q96P50 834 aa22.61■■□□□ 1.21
CLIP2-208ENST00000491075 TMEM134Q9H6X4 195 aa22.61■■□□□ 1.21
CLIP2-208ENST00000491075 LMAN1LQ9HAT1 526 aa22.61■■□□□ 1.21
CLIP2-208ENST00000491075 TRPV4Q9HBA0 871 aa22.61■■□□□ 1.21
CLIP2-208ENST00000491075 ASAH2Q9NR71 780 aa22.61■■□□□ 1.21
CLIP2-208ENST00000491075 CNTN3Q9P232 1028 aa22.61■■□□□ 1.21
CLIP2-208ENST00000491075 AFF4Q9UHB7 1163 aaKnown RBP22.61■■□□□ 1.21
CLIP2-208ENST00000491075 DCDC2BA2VCK2 349 aa22.6■■□□□ 1.21
CLIP2-208ENST00000491075 CCDC169A6NNP5 214 aa22.6■■□□□ 1.21
CLIP2-208ENST00000491075 NRG2O14511 850 aaPredicted RBP22.6■■□□□ 1.21
CLIP2-208ENST00000491075 ZNF263O14978 683 aa22.6■■□□□ 1.21
CLIP2-208ENST00000491075 MCF2P10911 925 aa22.6■■□□□ 1.21
CLIP2-208ENST00000491075 NPTX2P47972 431 aa22.6■■□□□ 1.21
CLIP2-208ENST00000491075 EPHA5P54756 1037 aa22.6■■□□□ 1.21
CLIP2-208ENST00000491075 SPEM2Q0P670 501 aa22.6■■□□□ 1.21
CLIP2-208ENST00000491075 APPL2Q8NEU8 664 aa22.6■■□□□ 1.21
CLIP2-208ENST00000491075 MSANTD3Q96H12 275 aa22.6■■□□□ 1.21
CLIP2-208ENST00000491075 ZSWIM3Q96MP5 696 aa22.6■■□□□ 1.21
CLIP2-208ENST00000491075 MOSPD3O75425 235 aa22.59■■□□□ 1.21
CLIP2-208ENST00000491075 KRT37O76014 449 aa22.59■■□□□ 1.21
CLIP2-208ENST00000491075 RETP07949 1114 aa22.59■■□□□ 1.21
CLIP2-208ENST00000491075 MCM4P33991 863 aa22.59■■□□□ 1.21
CLIP2-208ENST00000491075 MLLT6P55198 1093 aaPredicted RBP22.59■■□□□ 1.21
CLIP2-208ENST00000491075 PEX3P56589 373 aa22.59■■□□□ 1.21
CLIP2-208ENST00000491075 TWF1Q12792 350 aa22.59■■□□□ 1.21
CLIP2-208ENST00000491075 DMP1Q13316 513 aaPredicted RBP22.59■■□□□ 1.21
CLIP2-208ENST00000491075 ZNF174Q15697 407 aa22.59■■□□□ 1.21
CLIP2-208ENST00000491075 LPAL2Q16609 132 aa22.59■■□□□ 1.21
CLIP2-208ENST00000491075 ECM1Q16610 540 aa22.59■■□□□ 1.21
CLIP2-208ENST00000491075 C1orf228Q6PIY5 440 aa22.59■■□□□ 1.21
CLIP2-208ENST00000491075 MFSD6LQ8IWD5 586 aa22.59■■□□□ 1.21
CLIP2-208ENST00000491075 HS6ST3Q8IZP7 471 aa22.59■■□□□ 1.21
CLIP2-208ENST00000491075 ZSCAN18Q8TBC5 510 aaPredicted RBP22.59■■□□□ 1.21
CLIP2-208ENST00000491075 NETO1Q8TDF5 533 aa22.59■■□□□ 1.21
CLIP2-208ENST00000491075 E2F7Q96AV8 911 aa22.59■■□□□ 1.21
CLIP2-208ENST00000491075 GPR88Q9GZN0 384 aa22.59■■□□□ 1.21
CLIP2-208ENST00000491075 CEP72Q9P209 647 aa22.59■■□□□ 1.21
CLIP2-208ENST00000491075 ARHGAP28Q9P2N2 729 aa22.59■■□□□ 1.21
CLIP2-208ENST00000491075 CHRNB1P11230 501 aa22.58■■□□□ 1.21
CLIP2-208ENST00000491075 MYL4P12829 197 aa22.58■■□□□ 1.21
CLIP2-208ENST00000491075 CPB1P15086 417 aa22.58■■□□□ 1.21
CLIP2-208ENST00000491075 PROZP22891 400 aa22.58■■□□□ 1.21
CLIP2-208ENST00000491075 VIPR2P41587 438 aa22.58■■□□□ 1.21
CLIP2-208ENST00000491075 CXCL12P48061 93 aa22.58■■□□□ 1.21
CLIP2-208ENST00000491075 FXR2P51116 673 aaKnown RBP eCLIP22.58■■□□□ 1.21
CLIP2-208ENST00000491075 GUCY1B3Q02153 619 aa22.58■■□□□ 1.21
CLIP2-208ENST00000491075 MPZL3Q6UWV2 235 aa22.58■■□□□ 1.21
CLIP2-208ENST00000491075 PRR23BQ6ZRT6 265 aa22.58■■□□□ 1.21
CLIP2-208ENST00000491075 C18orf25Q96B23 403 aaPredicted RBP22.58■■□□□ 1.21
CLIP2-208ENST00000491075 TCHPQ9BT92 498 aa22.58■■□□□ 1.21
CLIP2-208ENST00000491075 TARS2Q9BW92 718 aaKnown RBP22.58■■□□□ 1.21
CLIP2-208ENST00000491075 DDX19AQ9NUU7 478 aaKnown RBP22.58■■□□□ 1.21
CLIP2-208ENST00000491075 KIAA1024Q9UPX6 916 aa22.58■■□□□ 1.21
CLIP2-208ENST00000491075 RBM19Q9Y4C8 960 aaKnown RBP22.58■■□□□ 1.21
CLIP2-208ENST00000491075 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.58■■□□□ 1.21
CLIP2-208ENST00000491075 NUP210Q8TEM1 1887 aaPredicted RBP22.58■■□□□ 1.2
CLIP2-208ENST00000491075 ARNTLO00327 626 aa22.57■■□□□ 1.2
CLIP2-208ENST00000491075 ADRB1P08588 477 aa22.57■■□□□ 1.2
CLIP2-208ENST00000491075 CCNE1P24864 410 aa22.57■■□□□ 1.2
CLIP2-208ENST00000491075 SATB1Q01826 763 aa22.57■■□□□ 1.2
CLIP2-208ENST00000491075 LRRC32Q14392 662 aa22.57■■□□□ 1.2
CLIP2-208ENST00000491075 TTC38Q5R3I4 469 aa22.57■■□□□ 1.2
CLIP2-208ENST00000491075 TAS1R3Q7RTX0 852 aa22.57■■□□□ 1.2
CLIP2-208ENST00000491075 DDX12PQ92771 950 aa22.57■■□□□ 1.2
CLIP2-208ENST00000491075 DRC1Q96MC2 740 aa22.57■■□□□ 1.2
CLIP2-208ENST00000491075 TBC1D32Q96NH3 1257 aa22.57■■□□□ 1.2
CLIP2-208ENST00000491075 FOXP1Q9H334 677 aaPredicted RBP22.57■■□□□ 1.2
CLIP2-208ENST00000491075 SLITRK6Q9H5Y7 841 aa22.57■■□□□ 1.2
CLIP2-208ENST00000491075 KMT5AQ9NQR1 393 aa22.57■■□□□ 1.2
CLIP2-208ENST00000491075 LRWD1Q9UFC0 647 aa22.57■■□□□ 1.2
CLIP2-208ENST00000491075 PCDHB8Q9UN66 801 aa22.57■■□□□ 1.2
CLIP2-208ENST00000491075 STK24Q9Y6E0 443 aa22.57■■□□□ 1.2
CLIP2-208ENST00000491075 MYH11P35749 1972 aa22.57■■□□□ 1.2
CLIP2-208ENST00000491075 NCANO14594 1321 aa22.57■■□□□ 1.2
CLIP2-208ENST00000491075 HEPACAM2A8MVW5 462 aa22.56■■□□□ 1.2
CLIP2-208ENST00000491075 ABLIM1O14639 778 aa22.56■■□□□ 1.2
CLIP2-208ENST00000491075 SLC30A4O14863 429 aa22.56■■□□□ 1.2
CLIP2-208ENST00000491075 GJA1P17302 382 aa22.56■■□□□ 1.2
CLIP2-208ENST00000491075 SIM2Q14190 667 aaPredicted RBP22.56■■□□□ 1.2
CLIP2-208ENST00000491075 TEAD2Q15562 447 aa22.56■■□□□ 1.2
CLIP2-208ENST00000491075 RNF19BQ6ZMZ0 732 aa22.56■■□□□ 1.2
CLIP2-208ENST00000491075 YAF2Q8IY57 180 aa22.56■■□□□ 1.2
CLIP2-208ENST00000491075 DAW1Q8N136 415 aa22.56■■□□□ 1.2
CLIP2-208ENST00000491075 SPEM1Q8N4L4 309 aa22.56■■□□□ 1.2
CLIP2-208ENST00000491075 CSGALNACT1Q8TDX6 532 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms