RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 EHBP1Q8NDI1 1231 aa20.06■□□□□ 0.8
MCF2L-230ENST00000491028 LMO3Q8TAP4 145 aa20.06■□□□□ 0.8
MCF2L-230ENST00000491028 TMEM175Q9BSA9 504 aa20.06■□□□□ 0.8
MCF2L-230ENST00000491028 CRACR2AQ9BSW2 395 aa20.06■□□□□ 0.8
MCF2L-230ENST00000491028 ZBED2Q9BTP6 218 aa20.06■□□□□ 0.8
MCF2L-230ENST00000491028 INTS2Q9H0H0 1204 aaKnown RBP20.06■□□□□ 0.8
MCF2L-230ENST00000491028 NRDE2Q9H7Z3 1164 aa20.06■□□□□ 0.8
MCF2L-230ENST00000491028 VRTNQ9H8Y1 702 aa20.06■□□□□ 0.8
MCF2L-230ENST00000491028 AGAP1Q9UPQ3 857 aa20.06■□□□□ 0.8
MCF2L-230ENST00000491028 SIK3Q9Y2K2 1263 aa20.06■□□□□ 0.8
MCF2L-230ENST00000491028 CASTOR2A6NHX0 329 aa20.05■□□□□ 0.8
MCF2L-230ENST00000491028 PODXLO00592 558 aa20.05■□□□□ 0.8
MCF2L-230ENST00000491028 DDHD2O94830 711 aa20.05■□□□□ 0.8
MCF2L-230ENST00000491028 ASS1P00966 412 aaKnown RBP20.05■□□□□ 0.8
MCF2L-230ENST00000491028 PON1P27169 355 aa20.05■□□□□ 0.8
MCF2L-230ENST00000491028 KCNMA1Q12791 1236 aa20.05■□□□□ 0.8
MCF2L-230ENST00000491028 MYO1EQ12965 1108 aa20.05■□□□□ 0.8
MCF2L-230ENST00000491028 BTG3Q14201 252 aaPredicted RBP20.05■□□□□ 0.8
MCF2L-230ENST00000491028 UPP1Q16831 310 aa20.05■□□□□ 0.8
MCF2L-230ENST00000491028 WDR44Q5JSH3 913 aa20.05■□□□□ 0.8
MCF2L-230ENST00000491028 TRIM65Q6PJ69 517 aa20.05■□□□□ 0.8
MCF2L-230ENST00000491028 ZNF280BQ86YH2 543 aa20.05■□□□□ 0.8
MCF2L-230ENST00000491028 SEMA4DQ92854 862 aa20.05■□□□□ 0.8
MCF2L-230ENST00000491028 FAXDC2Q96IV6 333 aa20.05■□□□□ 0.8
MCF2L-230ENST00000491028 RAD9AQ99638 391 aa20.05■□□□□ 0.8
MCF2L-230ENST00000491028 PLCB1Q9NQ66 1216 aa20.05■□□□□ 0.8
MCF2L-230ENST00000491028 DAAM1Q9Y4D1 1078 aa20.05■□□□□ 0.8
MCF2L-230ENST00000491028 ITIH6Q6UXX5 1313 aa20.04■□□□□ 0.8
MCF2L-230ENST00000491028 KIAA1671Q9BY89 1806 aa20.04■□□□□ 0.8
MCF2L-230ENST00000491028 TMEM189-UBE2V1I3L0A0 370 aa20.04■□□□□ 0.8
MCF2L-230ENST00000491028 SLC9A1P19634 815 aa20.04■□□□□ 0.8
MCF2L-230ENST00000491028 TAF6P49848 677 aa20.04■□□□□ 0.8
MCF2L-230ENST00000491028 CLCNKBP51801 687 aa20.04■□□□□ 0.8
MCF2L-230ENST00000491028 MYL6P60660 151 aa20.04■□□□□ 0.8
MCF2L-230ENST00000491028 ZNF699Q32M78 642 aa20.04■□□□□ 0.8
MCF2L-230ENST00000491028 SV2CQ496J9 727 aa20.04■□□□□ 0.8
MCF2L-230ENST00000491028 SP7Q8TDD2 431 aaPredicted RBP20.04■□□□□ 0.8
MCF2L-230ENST00000491028 HPDLQ96IR7 371 aa20.04■□□□□ 0.8
MCF2L-230ENST00000491028 PCMTD1Q96MG8 357 aaPredicted RBP20.04■□□□□ 0.8
MCF2L-230ENST00000491028 XYLT2Q9H1B5 865 aa20.04■□□□□ 0.8
MCF2L-230ENST00000491028 CWH43Q9H720 699 aa20.04■□□□□ 0.8
MCF2L-230ENST00000491028 TLL1O43897 1013 aa20.03■□□□□ 0.8
MCF2L-230ENST00000491028 B4GALT3O60512 393 aa20.03■□□□□ 0.8
MCF2L-230ENST00000491028 ADCY5O95622 1261 aa20.03■□□□□ 0.8
MCF2L-230ENST00000491028 RFX1P22670 979 aa20.03■□□□□ 0.8
MCF2L-230ENST00000491028 CDC25BP30305 580 aa20.03■□□□□ 0.8
MCF2L-230ENST00000491028 OR1G1P47890 313 aa20.03■□□□□ 0.8
MCF2L-230ENST00000491028 NOP14P78316 857 aaKnown RBP20.03■□□□□ 0.8
MCF2L-230ENST00000491028 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.03■□□□□ 0.8
MCF2L-230ENST00000491028 VSTM4Q8IW00 320 aa20.03■□□□□ 0.8
MCF2L-230ENST00000491028 IQCDQ96DY2 449 aa20.03■□□□□ 0.8
MCF2L-230ENST00000491028 FAM81BQ96LP2 452 aa20.03■□□□□ 0.8
MCF2L-230ENST00000491028 NT5C1BQ96P26 610 aa20.03■□□□□ 0.8
MCF2L-230ENST00000491028 LSM14BQ9BX40 385 aaKnown RBP20.03■□□□□ 0.8
MCF2L-230ENST00000491028 APEX2Q9UBZ4 518 aa20.03■□□□□ 0.8
MCF2L-230ENST00000491028 DNAJB4Q9UDY4 337 aa20.03■□□□□ 0.8
MCF2L-230ENST00000491028 SCN1AP35498 2009 aa20.03■□□□□ 0.8
MCF2L-230ENST00000491028 PPEF2O14830 753 aa20.02■□□□□ 0.8
MCF2L-230ENST00000491028 P4HA1P13674 534 aa20.02■□□□□ 0.8
MCF2L-230ENST00000491028 LAG3P18627 525 aa20.02■□□□□ 0.8
MCF2L-230ENST00000491028 FIGNQ5HY92 759 aa20.02■□□□□ 0.8
MCF2L-230ENST00000491028 ZNF667Q5HYK9 610 aa20.02■□□□□ 0.8
MCF2L-230ENST00000491028 SPECC1LQ69YQ0 1117 aa20.02■□□□□ 0.8
MCF2L-230ENST00000491028 DCLRE1AQ6PJP8 1040 aa20.02■□□□□ 0.8
MCF2L-230ENST00000491028 TMEM130Q8N3G9 435 aa20.02■□□□□ 0.8
MCF2L-230ENST00000491028 FIBCD1Q8N539 461 aa20.02■□□□□ 0.8
MCF2L-230ENST00000491028 NEK11Q8NG66 645 aa20.02■□□□□ 0.8
MCF2L-230ENST00000491028 ANP32BQ92688 251 aaKnown RBP20.02■□□□□ 0.8
MCF2L-230ENST00000491028 PI4K2AQ9BTU6 479 aa20.02■□□□□ 0.8
MCF2L-230ENST00000491028 SIX2Q9NPC8 291 aa20.02■□□□□ 0.8
MCF2L-230ENST00000491028 FBXL5Q9UKA1 691 aa20.02■□□□□ 0.8
MCF2L-230ENST00000491028 GBF1Q92538 1859 aa20.01■□□□□ 0.79
MCF2L-230ENST00000491028 NRP1O14786 923 aa20.01■□□□□ 0.79
MCF2L-230ENST00000491028 B3GAT3O94766 335 aa20.01■□□□□ 0.79
MCF2L-230ENST00000491028 CLSTN1O94985 981 aa20.01■□□□□ 0.79
MCF2L-230ENST00000491028 ALDH2P05091 517 aa20.01■□□□□ 0.79
MCF2L-230ENST00000491028 GALTP07902 379 aa20.01■□□□□ 0.79
MCF2L-230ENST00000491028 SLC11A1P49279 550 aa20.01■□□□□ 0.79
MCF2L-230ENST00000491028 TRIM14Q14142 442 aa20.01■□□□□ 0.79
MCF2L-230ENST00000491028 SCARA3Q6AZY7 606 aa20.01■□□□□ 0.79
MCF2L-230ENST00000491028 DPY19L2P1Q6NXN4 242 aa20.01■□□□□ 0.79
MCF2L-230ENST00000491028 PAAF1Q9BRP4 392 aa20.01■□□□□ 0.79
MCF2L-230ENST00000491028 NUP58Q9BVL2 599 aa20.01■□□□□ 0.79
MCF2L-230ENST00000491028 COLEC11Q9BWP8 271 aa20.01■□□□□ 0.79
MCF2L-230ENST00000491028 NIF3L1Q9GZT8 377 aa20.01■□□□□ 0.79
MCF2L-230ENST00000491028 GANQ9H2C0 597 aa20.01■□□□□ 0.79
MCF2L-230ENST00000491028 FAM207AQ9NSI2 230 aaPredicted RBP20.01■□□□□ 0.79
MCF2L-230ENST00000491028 GDAP2Q9NXN4 497 aa20.01■□□□□ 0.79
MCF2L-230ENST00000491028 HCSTQ9UBK5 93 aa20.01■□□□□ 0.79
MCF2L-230ENST00000491028 CACNG4Q9UBN1 327 aa20.01■□□□□ 0.79
MCF2L-230ENST00000491028 FAN1Q9Y2M0 1017 aa20.01■□□□□ 0.79
MCF2L-230ENST00000491028 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.01■□□□□ 0.79
MCF2L-230ENST00000491028 MRPL42Q9Y6G3 142 aaKnown RBP20.01■□□□□ 0.79
MCF2L-230ENST00000491028 KPNA7A9QM74 516 aa20■□□□□ 0.79
MCF2L-230ENST00000491028 LRRN2O75325 713 aa20■□□□□ 0.79
MCF2L-230ENST00000491028 KIF4AO95239 1232 aa20■□□□□ 0.79
MCF2L-230ENST00000491028 TBXAS1P24557 533 aaPredicted RBP20■□□□□ 0.79
MCF2L-230ENST00000491028 ALDH7A1P49419 539 aaKnown RBP20■□□□□ 0.79
MCF2L-230ENST00000491028 AARSP49588 968 aaKnown RBP eCLIP20■□□□□ 0.79
MCF2L-230ENST00000491028 KLK7P49862 253 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms