RNA–Protein interactions for RNA: ENST00000490692.1

PCSK9-202, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

TSL 2

Gene PCSK9, Length 3,891 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-202ENST00000490692 ETNK2Q9NVF9 386 aa12.15□□□□□ -0.46
PCSK9-202ENST00000490692 DNAAF2Q9NVR5 837 aaKnown RBP12.15□□□□□ -0.46
PCSK9-202ENST00000490692 GNPATO15228 680 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 LYNP07948 512 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 CAV1Q03135 178 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 RASA2Q15283 850 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 LGSNQ5TDP6 509 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 TTC27Q6P3X3 843 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 CLEC4GQ6UXB4 293 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 TRIM67Q6ZTA4 783 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 SLFN12Q8IYM2 578 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 EFCAB3Q8N7B9 438 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 LRRC15Q8TF66 581 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 ZNF75CPQ92670 426 aaPredicted RBP12.14□□□□□ -0.47
PCSK9-202ENST00000490692 ARHGEF1Q92888 912 aaKnown RBP12.14□□□□□ -0.47
PCSK9-202ENST00000490692 NT5C1BQ96P26 610 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 PHF12Q96QT6 1004 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 APOL6Q9BWW8 343 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 GRIP2Q9C0E4 1043 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 ARL8BQ9NVJ2 186 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 BLOC1S6Q9UL45 172 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 ARHGAP10A1A4S6 786 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 CLPTM1O96005 669 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 HLA-DOAP06340 250 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 PHEXP78562 749 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 TCP10Q12799 353 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 EDRF1Q3B7T1 1238 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 PTF1AQ7RTS3 328 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 PDIK1LQ8N165 341 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 CPA5Q8WXQ8 436 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 ZNF512BQ96KM6 892 aaPredicted RBP12.14□□□□□ -0.47
PCSK9-202ENST00000490692 RUSC1Q9BVN2 902 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 DNAJC18Q9H819 358 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 TSC22D4Q9Y3Q8 395 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 COL5A2P05997 1499 aaPredicted RBP12.14□□□□□ -0.47
PCSK9-202ENST00000490692 FCHO1O14526 889 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 RIMBP2O15034 1052 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 GGPS1O95749 300 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 BMP3P12645 472 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 BGNP21810 368 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 PDIA5Q14554 519 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 MAP3K21Q5TCX8 1036 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 PCNX4Q63HM2 1172 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 C4orf50Q6ZRC1 276 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 TTC16Q8NEE8 873 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 CXorf38Q8TB03 319 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 WDR60Q8WVS4 1066 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 FAM81BQ96LP2 452 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 GCNAQ96QF7 691 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 FAM192AQ9GZU8 254 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 ASCC2Q9H1I8 757 aaPredicted RBP12.14□□□□□ -0.47
PCSK9-202ENST00000490692 THEGQ9P2T0 379 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 PACSIN3Q9UKS6 424 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 KIF1AQ12756 1690 aa12.14□□□□□ -0.47
PCSK9-202ENST00000490692 USP17L10C9JJH3 530 aa12.13□□□□□ -0.47
PCSK9-202ENST00000490692 RBAK-RBAKDNI3L0D1 243 aa12.13□□□□□ -0.47
PCSK9-202ENST00000490692 PDXKO00764 312 aa12.13□□□□□ -0.47
PCSK9-202ENST00000490692 NEK3P51956 506 aa12.13□□□□□ -0.47
PCSK9-202ENST00000490692 RTP1P59025 263 aa12.13□□□□□ -0.47
PCSK9-202ENST00000490692 PARP6Q2NL67 630 aa12.13□□□□□ -0.47
PCSK9-202ENST00000490692 CNPY1Q3B7I2 92 aa12.13□□□□□ -0.47
PCSK9-202ENST00000490692 C3orf62Q6ZUJ4 267 aa12.13□□□□□ -0.47
PCSK9-202ENST00000490692 MARK2Q7KZI7 788 aaKnown RBP12.13□□□□□ -0.47
PCSK9-202ENST00000490692 USP37Q86T82 979 aa12.13□□□□□ -0.47
PCSK9-202ENST00000490692 PALB2Q86YC2 1186 aa12.13□□□□□ -0.47
PCSK9-202ENST00000490692 NUDCD3Q8IVD9 361 aa12.13□□□□□ -0.47
PCSK9-202ENST00000490692 NAP1L4Q99733 375 aaKnown RBP12.13□□□□□ -0.47
PCSK9-202ENST00000490692 RIOK1Q9BRS2 568 aaKnown RBP12.13□□□□□ -0.47
PCSK9-202ENST00000490692 PCMTD2Q9NV79 361 aa12.13□□□□□ -0.47
PCSK9-202ENST00000490692 PSMC3IPQ9P2W1 217 aaPredicted RBP12.13□□□□□ -0.47
PCSK9-202ENST00000490692 HNRNPCL1O60812 293 aaKnown RBP12.13□□□□□ -0.47
PCSK9-202ENST00000490692 TBX10O75333 385 aa12.13□□□□□ -0.47
PCSK9-202ENST00000490692 KRT10P13645 584 aa12.13□□□□□ -0.47
PCSK9-202ENST00000490692 PSMC6P62333 389 aa12.13□□□□□ -0.47
PCSK9-202ENST00000490692 ZYXQ15942 572 aaKnown RBP12.13□□□□□ -0.47
PCSK9-202ENST00000490692 ACSBG2Q5FVE4 666 aa12.13□□□□□ -0.47
PCSK9-202ENST00000490692 TBC1D9BQ66K14 1250 aa12.13□□□□□ -0.47
PCSK9-202ENST00000490692 VSTM1Q6UX27 236 aa12.13□□□□□ -0.47
PCSK9-202ENST00000490692 ZDHHC24Q6UX98 284 aa12.13□□□□□ -0.47
PCSK9-202ENST00000490692 ANO3Q9BYT9 981 aa12.13□□□□□ -0.47
PCSK9-202ENST00000490692 XAB2Q9HCS7 855 aaKnown RBP12.13□□□□□ -0.47
PCSK9-202ENST00000490692 SGPL1O95470 568 aa12.13□□□□□ -0.47
PCSK9-202ENST00000490692 CD19P15391 556 aa12.13□□□□□ -0.47
PCSK9-202ENST00000490692 NAT1P18440 290 aa12.13□□□□□ -0.47
PCSK9-202ENST00000490692 LMNB2Q03252 620 aa12.13□□□□□ -0.47
PCSK9-202ENST00000490692 COG2Q14746 738 aa12.13□□□□□ -0.47
PCSK9-202ENST00000490692 LIN52Q52LA3 116 aa12.13□□□□□ -0.47
PCSK9-202ENST00000490692 OTOAQ7RTW8 1153 aa12.13□□□□□ -0.47
PCSK9-202ENST00000490692 NSUN4Q96CB9 384 aaKnown RBP12.13□□□□□ -0.47
PCSK9-202ENST00000490692 ERLEC1Q96DZ1 483 aa12.13□□□□□ -0.47
PCSK9-202ENST00000490692 DCCP43146 1447 aa12.13□□□□□ -0.47
PCSK9-202ENST00000490692 ANKRD33BA6NCL7 494 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 A6NHS1 94 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 GJB6O95452 261 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 VAV1P15498 845 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 SAT1P21673 171 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 PRAMEP78395 509 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 HIF1AQ16665 826 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 EMC10Q5UCC4 262 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 RSPH3Q86UC2 560 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms