RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 ZSCAN5DPP0CG00 497 aa13.54□□□□□ -0.24
SHOX2-205ENST00000490689 PRKCIP41743 596 aa13.54□□□□□ -0.24
SHOX2-205ENST00000490689 ASPHQ12797 758 aa13.54□□□□□ -0.24
SHOX2-205ENST00000490689 DCAF4Q8WV16 495 aa13.54□□□□□ -0.24
SHOX2-205ENST00000490689 SNRNP27Q8WVK2 155 aaKnown RBP13.54□□□□□ -0.24
SHOX2-205ENST00000490689 HIC2Q96JB3 615 aa13.54□□□□□ -0.24
SHOX2-205ENST00000490689 ZNF668Q96K58 619 aaPredicted RBP13.54□□□□□ -0.24
SHOX2-205ENST00000490689 LRRC4BQ9NT99 713 aa13.54□□□□□ -0.24
SHOX2-205ENST00000490689 PLA2G4FQ68DD2 849 aa13.54□□□□□ -0.24
SHOX2-205ENST00000490689 LRRC57Q8N9N7 239 aa13.54□□□□□ -0.24
SHOX2-205ENST00000490689 COMMD10Q9Y6G5 202 aa13.54□□□□□ -0.24
SHOX2-205ENST00000490689 ATRNO75882 1429 aa13.54□□□□□ -0.24
SHOX2-205ENST00000490689 MAP3K6O95382 1288 aa13.54□□□□□ -0.24
SHOX2-205ENST00000490689 ZBED1O96006 694 aa13.54□□□□□ -0.24
SHOX2-205ENST00000490689 MYL2P10916 166 aa13.54□□□□□ -0.24
SHOX2-205ENST00000490689 CYP11B1P15538 503 aa13.54□□□□□ -0.24
SHOX2-205ENST00000490689 PTPN4P29074 926 aa13.54□□□□□ -0.24
SHOX2-205ENST00000490689 RFC1P35251 1148 aaPredicted RBP13.54□□□□□ -0.24
SHOX2-205ENST00000490689 QARSP47897 775 aaKnown RBP13.54□□□□□ -0.24
SHOX2-205ENST00000490689 PPATQ06203 517 aa13.54□□□□□ -0.24
SHOX2-205ENST00000490689 HIC1Q14526 733 aa13.54□□□□□ -0.24
SHOX2-205ENST00000490689 KPNB1Q14974 876 aaKnown RBP13.54□□□□□ -0.24
SHOX2-205ENST00000490689 IZUMO2Q6UXV1 221 aa13.54□□□□□ -0.24
SHOX2-205ENST00000490689 TMEM179Q6ZVK1 233 aa13.54□□□□□ -0.24
SHOX2-205ENST00000490689 DEPDC1BQ8WUY9 529 aa13.54□□□□□ -0.24
SHOX2-205ENST00000490689 PRPF31Q8WWY3 499 aaKnown RBP13.54□□□□□ -0.24
SHOX2-205ENST00000490689 CNKSR2Q8WXI2 1034 aa13.54□□□□□ -0.24
SHOX2-205ENST00000490689 ARHGEF1Q92888 912 aaKnown RBP13.54□□□□□ -0.24
SHOX2-205ENST00000490689 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.54□□□□□ -0.24
SHOX2-205ENST00000490689 PIK3R2O00459 728 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 GJB6O95452 261 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 HNRNPCP07910 306 aaKnown RBP eCLIP13.53□□□□□ -0.24
SHOX2-205ENST00000490689 SETSIPP0DME0 302 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 MX2P20592 715 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 PRPF39Q86UA1 669 aaKnown RBP13.53□□□□□ -0.24
SHOX2-205ENST00000490689 MCEEQ96PE7 176 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 TMEM121Q9BTD3 319 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 KCTD10Q9H3F6 313 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 EME2A4GXA9 379 aaPredicted RBP13.53□□□□□ -0.24
SHOX2-205ENST00000490689 ADRA1DP25100 572 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 DLG4P78352 724 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 PTK7Q13308 1070 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 C6orf89Q6UWU4 347 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 SYDE1Q6ZW31 735 aaPredicted RBP13.53□□□□□ -0.24
SHOX2-205ENST00000490689 NMD3Q96D46 503 aaKnown RBP13.53□□□□□ -0.24
SHOX2-205ENST00000490689 PAGR1Q9BTK6 254 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 BCAS3Q9H6U6 928 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 K7ERI5 159 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 EML1O00423 815 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 P4HBP07237 508 aaKnown RBP13.53□□□□□ -0.24
SHOX2-205ENST00000490689 SSTR1P30872 391 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 RPA3P35244 121 aaPredicted RBP13.53□□□□□ -0.24
SHOX2-205ENST00000490689 MTFR1Q15390 333 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 CYTH1Q15438 398 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 KRT80Q6KB66 452 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 C1orf228Q6PIY5 440 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 ZNF720Q7Z2F6 126 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 ZNF354CQ86Y25 554 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 ATXN7L3BQ96GX2 97 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 MSTO1Q9BUK6 570 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 C10orf88Q9H8K7 445 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 AFF2P51816 1311 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 GPR75-ASB3A0A0A6YYF3 556 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 ANKRD63C9JTQ0 380 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 FAM86B1E9PN63 330 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 BBOX1O75936 387 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 FAM86B2P0C5J1 330 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 PEX5P50542 639 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 MTMR1Q13613 665 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 ZNF572Q7Z3I7 529 aaPredicted RBP13.53□□□□□ -0.24
SHOX2-205ENST00000490689 RBBP8NLQ8NC74 664 aaPredicted RBP13.53□□□□□ -0.24
SHOX2-205ENST00000490689 TAS1R2Q8TE23 839 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 FAM84AQ96KN4 292 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 VPS11Q9H270 941 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 CYP39A1Q9NYL5 469 aa13.53□□□□□ -0.24
SHOX2-205ENST00000490689 MAGEA13PA6NCF6 341 aa13.52□□□□□ -0.24
SHOX2-205ENST00000490689 PPEF1O14829 653 aaPredicted RBP13.52□□□□□ -0.24
SHOX2-205ENST00000490689 DKC1O60832 514 aaKnown RBP eCLIP13.52□□□□□ -0.24
SHOX2-205ENST00000490689 KRT36O76013 467 aa13.52□□□□□ -0.24
SHOX2-205ENST00000490689 CRKP46108 304 aa13.52□□□□□ -0.24
SHOX2-205ENST00000490689 SLC12A3P55017 1021 aa13.52□□□□□ -0.24
SHOX2-205ENST00000490689 SH3BGRP55822 239 aaPredicted RBP13.52□□□□□ -0.24
SHOX2-205ENST00000490689 DLGAP5Q15398 846 aa13.52□□□□□ -0.24
SHOX2-205ENST00000490689 NOP9Q86U38 636 aaKnown RBP13.52□□□□□ -0.24
SHOX2-205ENST00000490689 TMEM35BQ8NCS4 154 aa13.52□□□□□ -0.24
SHOX2-205ENST00000490689 ICA1LQ8NDH6 482 aa13.52□□□□□ -0.24
SHOX2-205ENST00000490689 WWP1Q9H0M0 922 aa13.52□□□□□ -0.24
SHOX2-205ENST00000490689 DPPA5A6NC42 116 aa13.52□□□□□ -0.25
SHOX2-205ENST00000490689 ACADSP16219 412 aa13.52□□□□□ -0.25
SHOX2-205ENST00000490689 SMARCA1P28370 1054 aa13.52□□□□□ -0.25
SHOX2-205ENST00000490689 PPP4CP60510 307 aa13.52□□□□□ -0.25
SHOX2-205ENST00000490689 ZCWPW2Q504Y3 356 aa13.52□□□□□ -0.25
SHOX2-205ENST00000490689 KCNT1Q5JUK3 1230 aa13.52□□□□□ -0.25
SHOX2-205ENST00000490689 FAXCQ5TGI0 409 aa13.52□□□□□ -0.25
SHOX2-205ENST00000490689 OR6B2Q6IFH4 312 aa13.52□□□□□ -0.25
SHOX2-205ENST00000490689 ACAD10Q6JQN1 1059 aa13.52□□□□□ -0.25
SHOX2-205ENST00000490689 RAPH1Q70E73 1250 aa13.52□□□□□ -0.25
SHOX2-205ENST00000490689 CCNYQ8ND76 341 aa13.52□□□□□ -0.25
SHOX2-205ENST00000490689 NLRP7Q8WX94 980 aa13.52□□□□□ -0.25
SHOX2-205ENST00000490689 CDKL2Q92772 493 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms