RNA–Protein interactions for RNA: ENST00000490667.1

SHC1-211, Transcript of SHC adaptor protein 1, humanhuman

TSL 2

Gene SHC1, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-211ENST00000490667 CNNM4Q6P4Q7 775 aa14.29□□□□□ -0.12
SHC1-211ENST00000490667 CRELD2Q6UXH1 353 aaPredicted RBP14.29□□□□□ -0.12
SHC1-211ENST00000490667 STXBP4Q6ZWJ1 553 aa14.29□□□□□ -0.12
SHC1-211ENST00000490667 TDRD5Q8NAT2 981 aaKnown RBP14.29□□□□□ -0.12
SHC1-211ENST00000490667 HPS3Q969F9 1004 aa14.29□□□□□ -0.12
SHC1-211ENST00000490667 ACSF2Q96CM8 615 aaPredicted RBP14.29□□□□□ -0.12
SHC1-211ENST00000490667 CHAMP1Q96JM3 812 aa14.29□□□□□ -0.12
SHC1-211ENST00000490667 SPATA32Q96LK8 384 aa14.29□□□□□ -0.12
SHC1-211ENST00000490667 PYM1Q9BRP8 204 aaKnown RBP14.29□□□□□ -0.12
SHC1-211ENST00000490667 TMEM206Q9H813 350 aa14.29□□□□□ -0.12
SHC1-211ENST00000490667 WDR6Q9NNW5 1121 aaKnown RBP14.29□□□□□ -0.12
SHC1-211ENST00000490667 LIMD1Q9UGP4 676 aa14.29□□□□□ -0.12
SHC1-211ENST00000490667 DERAQ9Y315 318 aa14.29□□□□□ -0.12
SHC1-211ENST00000490667 ATP6V1DQ9Y5K8 247 aa14.29□□□□□ -0.12
SHC1-211ENST00000490667 TULP1O00294 542 aaPredicted RBP14.28□□□□□ -0.12
SHC1-211ENST00000490667 TBC1D4O60343 1298 aa14.28□□□□□ -0.12
SHC1-211ENST00000490667 LDHAP00338 332 aaKnown RBP14.28□□□□□ -0.12
SHC1-211ENST00000490667 C8AP07357 584 aa14.28□□□□□ -0.12
SHC1-211ENST00000490667 NFICP08651 508 aa14.28□□□□□ -0.12
SHC1-211ENST00000490667 HNRNPA1P09651 372 aaKnown RBP eCLIP14.28□□□□□ -0.12
SHC1-211ENST00000490667 GARTP22102 1010 aa14.28□□□□□ -0.12
SHC1-211ENST00000490667 CMA1P23946 247 aa14.28□□□□□ -0.12
SHC1-211ENST00000490667 AFMP43652 599 aa14.28□□□□□ -0.12
SHC1-211ENST00000490667 ARPP19P56211 112 aa14.28□□□□□ -0.12
SHC1-211ENST00000490667 TMEM132DQ14C87 1099 aa14.28□□□□□ -0.12
SHC1-211ENST00000490667 PTPN21Q16825 1174 aa14.28□□□□□ -0.12
SHC1-211ENST00000490667 CTXN3Q4LDR2 81 aa14.28□□□□□ -0.12
SHC1-211ENST00000490667 PPM1LQ5SGD2 360 aa14.28□□□□□ -0.12
SHC1-211ENST00000490667 SLC8B1Q6J4K2 584 aa14.28□□□□□ -0.12
SHC1-211ENST00000490667 GLIS3Q8NEA6 775 aa14.28□□□□□ -0.12
SHC1-211ENST00000490667 ZNF461Q8TAF7 563 aa14.28□□□□□ -0.12
SHC1-211ENST00000490667 FAM213AQ9BRX8 229 aa14.28□□□□□ -0.12
SHC1-211ENST00000490667 BLZF1Q9H2G9 400 aa14.28□□□□□ -0.12
SHC1-211ENST00000490667 SERTAD1Q9UHV2 236 aa14.28□□□□□ -0.12
SHC1-211ENST00000490667 PCDHB8Q9UN66 801 aa14.28□□□□□ -0.12
SHC1-211ENST00000490667 C2CD2Q9Y426 696 aa14.28□□□□□ -0.12
SHC1-211ENST00000490667 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.27□□□□□ -0.13
SHC1-211ENST00000490667 M0QZQ0 153 aa14.27□□□□□ -0.13
SHC1-211ENST00000490667 PPEF2O14830 753 aa14.27□□□□□ -0.13
SHC1-211ENST00000490667 ABLIM3O94929 683 aa14.27□□□□□ -0.13
SHC1-211ENST00000490667 IL18RAPO95256 599 aa14.27□□□□□ -0.13
SHC1-211ENST00000490667 SLFN14P0C7P3 912 aa14.27□□□□□ -0.13
SHC1-211ENST00000490667 PAX3P23760 479 aa14.27□□□□□ -0.13
SHC1-211ENST00000490667 CASP1P29466 404 aa14.27□□□□□ -0.13
SHC1-211ENST00000490667 C9orf57Q5W0N0 161 aa14.27□□□□□ -0.13
SHC1-211ENST00000490667 DSTYKQ6XUX3 929 aa14.27□□□□□ -0.13
SHC1-211ENST00000490667 TRIM67Q6ZTA4 783 aa14.27□□□□□ -0.13
SHC1-211ENST00000490667 UNC13DQ70J99 1090 aa14.27□□□□□ -0.13
SHC1-211ENST00000490667 RTL10Q7L3V2 364 aa14.27□□□□□ -0.13
SHC1-211ENST00000490667 CEP57L1Q8IYX8 460 aa14.27□□□□□ -0.13
SHC1-211ENST00000490667 ZSWIM2Q8NEG5 633 aa14.27□□□□□ -0.13
SHC1-211ENST00000490667 SLC7A14Q8TBB6 771 aa14.27□□□□□ -0.13
SHC1-211ENST00000490667 SAAL1Q96ER3 474 aa14.27□□□□□ -0.13
SHC1-211ENST00000490667 PCIF1Q9H4Z3 704 aa14.27□□□□□ -0.13
SHC1-211ENST00000490667 DPP3Q9NY33 737 aa14.27□□□□□ -0.13
SHC1-211ENST00000490667 FBXL5Q9UKA1 691 aa14.27□□□□□ -0.13
SHC1-211ENST00000490667 TIMM13Q9Y5L4 95 aaPredicted RBP14.27□□□□□ -0.13
SHC1-211ENST00000490667 CLUHO75153 1309 aa14.26□□□□□ -0.13
SHC1-211ENST00000490667 TDRD15B5MCY1 1934 aaKnown RBP14.26□□□□□ -0.13
SHC1-211ENST00000490667 A0A1B0GVL5 298 aa14.26□□□□□ -0.13
SHC1-211ENST00000490667 PVALEFA0A1B0GWK0 134 aa14.26□□□□□ -0.13
SHC1-211ENST00000490667 ANO9A1A5B4 782 aa14.26□□□□□ -0.13
SHC1-211ENST00000490667 GOLGA8IPA6NC78 632 aa14.26□□□□□ -0.13
SHC1-211ENST00000490667 GOLGA8JA6NMD2 632 aa14.26□□□□□ -0.13
SHC1-211ENST00000490667 PIRO00625 290 aa14.26□□□□□ -0.13
SHC1-211ENST00000490667 CCL16O15467 120 aa14.26□□□□□ -0.13
SHC1-211ENST00000490667 EXTL3O43909 919 aa14.26□□□□□ -0.13
SHC1-211ENST00000490667 XYLBO75191 536 aa14.26□□□□□ -0.13
SHC1-211ENST00000490667 ASGR2P07307 311 aa14.26□□□□□ -0.13
SHC1-211ENST00000490667 HOXA9P31269 272 aa14.26□□□□□ -0.13
SHC1-211ENST00000490667 GBP2P32456 591 aaPredicted RBP14.26□□□□□ -0.13
SHC1-211ENST00000490667 ELF1P32519 619 aa14.26□□□□□ -0.13
SHC1-211ENST00000490667 AARSP49588 968 aaKnown RBP eCLIP14.26□□□□□ -0.13
SHC1-211ENST00000490667 LILRA4P59901 499 aa14.26□□□□□ -0.13
SHC1-211ENST00000490667 ROR1Q01973 937 aa14.26□□□□□ -0.13
SHC1-211ENST00000490667 CUL4BQ13620 913 aa14.26□□□□□ -0.13
SHC1-211ENST00000490667 FAM26FQ5R3K3 315 aa14.26□□□□□ -0.13
SHC1-211ENST00000490667 ZNF280DQ6N043 979 aa14.26□□□□□ -0.13
SHC1-211ENST00000490667 GRASPQ7Z6J2 395 aaPredicted RBP14.26□□□□□ -0.13
SHC1-211ENST00000490667 USP37Q86T82 979 aa14.26□□□□□ -0.13
SHC1-211ENST00000490667 ZNF507Q8TCN5 953 aa14.26□□□□□ -0.13
SHC1-211ENST00000490667 NOC3LQ8WTT2 800 aaKnown RBP14.26□□□□□ -0.13
SHC1-211ENST00000490667 CBWD1Q9BRT8 395 aa14.26□□□□□ -0.13
SHC1-211ENST00000490667 SCAND2PQ9GZW5 306 aaPredicted RBP14.26□□□□□ -0.13
SHC1-211ENST00000490667 POLIQ9UNA4 740 aa14.26□□□□□ -0.13
SHC1-211ENST00000490667 SORCS3Q9UPU3 1222 aa14.26□□□□□ -0.13
SHC1-211ENST00000490667 NCOR1O75376 2440 aa14.25□□□□□ -0.13
SHC1-211ENST00000490667 WDR27A2RRH5 827 aa14.25□□□□□ -0.13
SHC1-211ENST00000490667 TMEM221A6NGB7 291 aa14.25□□□□□ -0.13
SHC1-211ENST00000490667 M0R296 226 aa14.25□□□□□ -0.13
SHC1-211ENST00000490667 KIAA0391O15091 583 aaKnown RBP14.25□□□□□ -0.13
SHC1-211ENST00000490667 SPTLC1O15269 473 aa14.25□□□□□ -0.13
SHC1-211ENST00000490667 EIF3DO15371 548 aaKnown RBP eCLIP14.25□□□□□ -0.13
SHC1-211ENST00000490667 N4BP1O75113 896 aaKnown RBP14.25□□□□□ -0.13
SHC1-211ENST00000490667 OAZ2O95190 189 aa14.25□□□□□ -0.13
SHC1-211ENST00000490667 ATF2P15336 505 aa14.25□□□□□ -0.13
SHC1-211ENST00000490667 PFKFB1P16118 471 aa14.25□□□□□ -0.13
SHC1-211ENST00000490667 HOXD13P35453 343 aa14.25□□□□□ -0.13
SHC1-211ENST00000490667 YWHAHQ04917 246 aaPredicted RBP14.25□□□□□ -0.13
SHC1-211ENST00000490667 EHHADHQ08426 723 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 454.1 ms