RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 MRPL44Q9H9J2 332 aaKnown RBP3.84□□□□□ -1.79
CRNKL1-203ENST00000490258 PIH1D3Q9NQM4 214 aaKnown RBP3.84□□□□□ -1.79
CRNKL1-203ENST00000490258 CNNM1Q9NRU3 951 aa3.84□□□□□ -1.79
CRNKL1-203ENST00000490258 VPS18Q9P253 973 aa3.84□□□□□ -1.79
CRNKL1-203ENST00000490258 FAN1Q9Y2M0 1017 aa3.84□□□□□ -1.79
CRNKL1-203ENST00000490258 SIT1Q9Y3P8 196 aa3.84□□□□□ -1.79
CRNKL1-203ENST00000490258 CEP83Q9Y592 693 aa3.84□□□□□ -1.79
CRNKL1-203ENST00000490258 FPGT-TNNI3KV9GXZ4 949 aa3.84□□□□□ -1.79
CRNKL1-203ENST00000490258 X6R8D5 127 aa3.84□□□□□ -1.79
CRNKL1-203ENST00000490258 ITIH6Q6UXX5 1313 aa3.84□□□□□ -1.79
CRNKL1-203ENST00000490258 CDHR2Q9BYE9 1310 aa3.84□□□□□ -1.79
CRNKL1-203ENST00000490258 GREB1LQ9C091 1923 aaPredicted RBP3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 SMCHD1A6NHR9 2005 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 CYP2D7A0A087X1C5 515 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 A0A1B0GVL5 298 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 SRRM3A6NNA2 597 aaPredicted RBP3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 TMEM232C9JQI7 657 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 GOLIM4O00461 696 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 PSMD14O00487 310 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 KIF5CO60282 957 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 PDE8AO60658 829 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 N4BP1O75113 896 aaKnown RBP3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 WDHD1O75717 1129 aaPredicted RBP3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 SYF2O95926 243 aaKnown RBP3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 C8BP07358 591 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 CCDC172P0C7W6 258 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 EPB41P11171 864 aaKnown RBP3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 LCP1P13796 627 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 DPEP1P16444 411 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 CNR2P34972 360 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 USP8P40818 1118 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 ARHGAP25P42331 645 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 MCAMP43121 646 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 SARSP49591 514 aaKnown RBP3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 SEPHS1P49903 392 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 KRTAP10-9P60411 292 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 VSNL1P62760 191 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 KIF23Q02241 960 aaPredicted RBP3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 ARID5AQ03989 594 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 ITIH3Q06033 890 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 TMEM62Q0P6H9 643 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 TRDNQ13061 729 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 KLF10Q13118 480 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 STK3Q13188 491 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 GNL2Q13823 731 aaKnown RBP3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 STK38Q15208 465 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 NTRK3Q16288 839 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 RABL6Q3YEC7 729 aaPredicted RBP3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 MCMDC2Q4G0Z9 681 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 EMC10Q5UCC4 262 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 RESP18Q5W5W9 173 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 ANO1Q5XXA6 986 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 OLFML2BQ68BL8 750 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 KCNV1Q6PIU1 500 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 GBP6Q6ZN66 633 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 YTHDF3Q7Z739 585 aaKnown RBP3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 B3GNT8Q7Z7M8 397 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 ADGRA1Q86SQ6 560 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 SAPCD2Q86UD0 394 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 C2CD5Q86YS7 1000 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 RIOX2Q8IUF8 465 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 AMOTL1Q8IY63 956 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 LZTR1Q8N653 840 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 VGLL2Q8N8G2 317 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 JMYQ8N9B5 988 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 ZBTB38Q8NAP3 1195 aaPredicted RBP3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 PRPF38AQ8NAV1 312 aaKnown RBP3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 MLKLQ8NB16 471 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 TMEM145Q8NBT3 493 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 RCBTB1Q8NDN9 531 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 SPATA20Q8TB22 786 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 FNIP1Q8TF40 1166 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 KAT2BQ92831 832 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 NOX5Q96PH1 765 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 MAP3K14Q99558 947 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 SH3GL2Q99962 352 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 DBNDD1Q9H9R9 158 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 ARHGEF4Q9NR80 690 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 HELLSQ9NRZ9 838 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 KLHL42Q9P2K6 505 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 MAGEC2Q9UBF1 373 aaPredicted RBP3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 CLIC4Q9Y696 253 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 NID2Q14112 1375 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 LCTP09848 1927 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 CEP350Q5VT06 3117 aa3.83□□□□□ -1.8
CRNKL1-203ENST00000490258 GRIN2DO15399 1336 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 MAST3O60307 1309 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 ASTN2O75129 1339 aaPredicted RBP3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 ZNF541Q9H0D2 1346 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 STK36Q9NRP7 1315 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 TRBV23OR9-2A0A075B6M9 112 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 ANKRD18BA2A2Z9 1011 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 CTAGE15A4D2H0 777 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 CTAGE9A4FU28 777 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 SH3D21A4FU49 640 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 A6NNZ2 444 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 LRRIQ3A6PVS8 624 aaPredicted RBP3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 EYA2O00167 538 aa3.82□□□□□ -1.8
CRNKL1-203ENST00000490258 MFAP3LO75121 409 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms