RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 ZNF512Q96ME7 567 aaPredicted RBP15.32■□□□□ 0.04
VARS-227ENST00000489979 ZMAT2Q96NC0 199 aaKnown RBP15.32■□□□□ 0.04
VARS-227ENST00000489979 SEMA4GQ9NTN9 838 aa15.32■□□□□ 0.04
VARS-227ENST00000489979 DAXXQ9UER7 740 aaPredicted RBP15.32■□□□□ 0.04
VARS-227ENST00000489979 FBXL5Q9UKA1 691 aa15.32■□□□□ 0.04
VARS-227ENST00000489979 CITO14578 2027 aa15.32■□□□□ 0.04
VARS-227ENST00000489979 CHURC1-FNTBB4DL54 471 aa15.31■□□□□ 0.04
VARS-227ENST00000489979 K7ERI5 159 aa15.31■□□□□ 0.04
VARS-227ENST00000489979 HRO43593 1189 aa15.31■□□□□ 0.04
VARS-227ENST00000489979 MYL4P12829 197 aa15.31■□□□□ 0.04
VARS-227ENST00000489979 CCNE1P24864 410 aa15.31■□□□□ 0.04
VARS-227ENST00000489979 GRM5P41594 1212 aa15.31■□□□□ 0.04
VARS-227ENST00000489979 FNTBP49356 437 aa15.31■□□□□ 0.04
VARS-227ENST00000489979 DMWDQ09019 674 aa15.31■□□□□ 0.04
VARS-227ENST00000489979 TWF1Q12792 350 aa15.31■□□□□ 0.04
VARS-227ENST00000489979 SRSF5Q13243 272 aaKnown RBP15.31■□□□□ 0.04
VARS-227ENST00000489979 CTXN3Q4LDR2 81 aa15.31■□□□□ 0.04
VARS-227ENST00000489979 XKR4Q5GH76 650 aa15.31■□□□□ 0.04
VARS-227ENST00000489979 TPGS2Q68CL5 300 aa15.31■□□□□ 0.04
VARS-227ENST00000489979 PRR23CQ6ZRP0 262 aa15.31■□□□□ 0.04
VARS-227ENST00000489979 ERMNQ8TAM6 284 aa15.31■□□□□ 0.04
VARS-227ENST00000489979 ZSCAN18Q8TBC5 510 aaPredicted RBP15.31■□□□□ 0.04
VARS-227ENST00000489979 CCDC94Q9BW85 323 aaPredicted RBP15.31■□□□□ 0.04
VARS-227ENST00000489979 CDT1Q9H211 546 aa15.31■□□□□ 0.04
VARS-227ENST00000489979 TOPORSQ9NS56 1045 aaPredicted RBP15.31■□□□□ 0.04
VARS-227ENST00000489979 SLC38A7Q9NVC3 462 aa15.31■□□□□ 0.04
VARS-227ENST00000489979 CEP72Q9P209 647 aa15.31■□□□□ 0.04
VARS-227ENST00000489979 TNFSF13BQ9Y275 285 aa15.31■□□□□ 0.04
VARS-227ENST00000489979 NCANO14594 1321 aa15.31■□□□□ 0.04
VARS-227ENST00000489979 CNOT1A5YKK6 2376 aaKnown RBP15.31■□□□□ 0.04
VARS-227ENST00000489979 HEPACAM2A8MVW5 462 aa15.3■□□□□ 0.04
VARS-227ENST00000489979 ARNTLO00327 626 aa15.3■□□□□ 0.04
VARS-227ENST00000489979 TEAD2Q15562 447 aa15.3■□□□□ 0.04
VARS-227ENST00000489979 CSRP2Q16527 193 aa15.3■□□□□ 0.04
VARS-227ENST00000489979 ZNF568Q3ZCX4 644 aa15.3■□□□□ 0.04
VARS-227ENST00000489979 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.3■□□□□ 0.04
VARS-227ENST00000489979 MFSD6LQ8IWD5 586 aa15.3■□□□□ 0.04
VARS-227ENST00000489979 CSGALNACT1Q8TDX6 532 aa15.3■□□□□ 0.04
VARS-227ENST00000489979 KIFAP3Q92845 792 aa15.3■□□□□ 0.04
VARS-227ENST00000489979 C18orf25Q96B23 403 aaPredicted RBP15.3■□□□□ 0.04
VARS-227ENST00000489979 CHAMP1Q96JM3 812 aa15.3■□□□□ 0.04
VARS-227ENST00000489979 ACO2Q99798 780 aaKnown RBP15.3■□□□□ 0.04
VARS-227ENST00000489979 TRPV4Q9HBA0 871 aa15.3■□□□□ 0.04
VARS-227ENST00000489979 ASAH2Q9NR71 780 aa15.3■□□□□ 0.04
VARS-227ENST00000489979 RBM12Q9NTZ6 932 aaKnown RBP15.3■□□□□ 0.04
VARS-227ENST00000489979 AFF4Q9UHB7 1163 aaKnown RBP15.3■□□□□ 0.04
VARS-227ENST00000489979 NUB1Q9Y5A7 615 aa15.3■□□□□ 0.04
VARS-227ENST00000489979 SDK1Q7Z5N4 2213 aa15.29■□□□□ 0.04
VARS-227ENST00000489979 CFAP47Q6ZTR5 3102 aa15.29■□□□□ 0.04
VARS-227ENST00000489979 USP24Q9UPU5 2620 aa15.29■□□□□ 0.04
VARS-227ENST00000489979 GDF9O60383 454 aa15.29■□□□□ 0.04
VARS-227ENST00000489979 LARGE1O95461 756 aa15.29■□□□□ 0.04
VARS-227ENST00000489979 RPL9P32969 192 aaKnown RBP15.29■□□□□ 0.04
VARS-227ENST00000489979 EPHA5P54756 1037 aa15.29■□□□□ 0.04
VARS-227ENST00000489979 PTGDRQ13258 359 aa15.29■□□□□ 0.04
VARS-227ENST00000489979 TRIM29Q14134 588 aa15.29■□□□□ 0.04
VARS-227ENST00000489979 ECM1Q16610 540 aa15.29■□□□□ 0.04
VARS-227ENST00000489979 ME3Q16798 604 aa15.29■□□□□ 0.04
VARS-227ENST00000489979 ZNF280DQ6N043 979 aa15.29■□□□□ 0.04
VARS-227ENST00000489979 LONP2Q86WA8 852 aa15.29■□□□□ 0.04
VARS-227ENST00000489979 SPEM1Q8N4L4 309 aa15.29■□□□□ 0.04
VARS-227ENST00000489979 LEMD2Q8NC56 503 aa15.29■□□□□ 0.04
VARS-227ENST00000489979 NSUN7Q8NE18 718 aaKnown RBP15.29■□□□□ 0.04
VARS-227ENST00000489979 BHMT2Q9H2M3 363 aa15.29■□□□□ 0.04
VARS-227ENST00000489979 SLITRK6Q9H5Y7 841 aa15.29■□□□□ 0.04
VARS-227ENST00000489979 PTPRHQ9HD43 1115 aa15.29■□□□□ 0.04
VARS-227ENST00000489979 SLC38A8A6NNN8 435 aa15.28■□□□□ 0.04
VARS-227ENST00000489979 CCDC169A6NNP5 214 aa15.28■□□□□ 0.04
VARS-227ENST00000489979 K7ESF4 209 aa15.28■□□□□ 0.04
VARS-227ENST00000489979 JAK2O60674 1132 aa15.28■□□□□ 0.04
VARS-227ENST00000489979 OR52Z1P0C646 297 aa15.28■□□□□ 0.04
VARS-227ENST00000489979 KCNE1P15382 129 aa15.28■□□□□ 0.04
VARS-227ENST00000489979 KCNA4P22459 653 aa15.28■□□□□ 0.04
VARS-227ENST00000489979 MCM4P33991 863 aa15.28■□□□□ 0.04
VARS-227ENST00000489979 CNR2P34972 360 aa15.28■□□□□ 0.04
VARS-227ENST00000489979 SOX9P48436 509 aa15.28■□□□□ 0.04
VARS-227ENST00000489979 KPNA1P52294 538 aaPredicted RBP15.28■□□□□ 0.04
VARS-227ENST00000489979 MLLT6P55198 1093 aaPredicted RBP15.28■□□□□ 0.04
VARS-227ENST00000489979 LRRC32Q14392 662 aa15.28■□□□□ 0.04
VARS-227ENST00000489979 ANKRD1Q15327 319 aa15.28■□□□□ 0.04
VARS-227ENST00000489979 ZNF174Q15697 407 aa15.28■□□□□ 0.04
VARS-227ENST00000489979 HEATR6Q6AI08 1181 aaKnown RBP15.28■□□□□ 0.04
VARS-227ENST00000489979 RNF19BQ6ZMZ0 732 aa15.28■□□□□ 0.04
VARS-227ENST00000489979 YAF2Q8IY57 180 aa15.28■□□□□ 0.04
VARS-227ENST00000489979 SHKBP1Q8TBC3 707 aa15.28■□□□□ 0.04
VARS-227ENST00000489979 DDX12PQ92771 950 aa15.28■□□□□ 0.04
VARS-227ENST00000489979 GTF3C6Q969F1 213 aa15.28■□□□□ 0.04
VARS-227ENST00000489979 RSPRY1Q96DX4 576 aa15.28■□□□□ 0.04
VARS-227ENST00000489979 SUSD3Q96L08 255 aa15.28■□□□□ 0.04
VARS-227ENST00000489979 ACAP3Q96P50 834 aa15.28■□□□□ 0.04
VARS-227ENST00000489979 MRPL4Q9BYD3 311 aaKnown RBP15.28■□□□□ 0.04
VARS-227ENST00000489979 GPR88Q9GZN0 384 aa15.28■□□□□ 0.04
VARS-227ENST00000489979 MAFFQ9ULX9 164 aa15.28■□□□□ 0.04
VARS-227ENST00000489979 PHLPP2Q6ZVD8 1323 aa15.27■□□□□ 0.04
VARS-227ENST00000489979 MEFVO15553 781 aaPredicted RBP15.27■□□□□ 0.04
VARS-227ENST00000489979 PAPSS2O95340 614 aaPredicted RBP15.27■□□□□ 0.04
VARS-227ENST00000489979 CPB1P15086 417 aa15.27■□□□□ 0.04
VARS-227ENST00000489979 MUTP22033 750 aa15.27■□□□□ 0.04
VARS-227ENST00000489979 CCT6AP40227 531 aaKnown RBP15.27■□□□□ 0.04
VARS-227ENST00000489979 NPTX2P47972 431 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms