RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 AVENQ9NQS1 362 aaPredicted RBP21.16■□□□□ 0.98
TNFRSF1B-202ENST00000489921 DLGAP2Q9P1A6 1054 aa21.16■□□□□ 0.98
TNFRSF1B-202ENST00000489921 NUB1Q9Y5A7 615 aa21.16■□□□□ 0.98
TNFRSF1B-202ENST00000489921 A0A0B4J269 797 aa21.15■□□□□ 0.98
TNFRSF1B-202ENST00000489921 M0QZQ0 153 aa21.15■□□□□ 0.98
TNFRSF1B-202ENST00000489921 TRAK2O60296 914 aa21.15■□□□□ 0.98
TNFRSF1B-202ENST00000489921 RHOP08100 348 aa21.15■□□□□ 0.98
TNFRSF1B-202ENST00000489921 AARSP49588 968 aaKnown RBP eCLIP21.15■□□□□ 0.98
TNFRSF1B-202ENST00000489921 PHLDB3Q6NSJ2 640 aa21.15■□□□□ 0.98
TNFRSF1B-202ENST00000489921 ING5Q8WYH8 240 aa21.15■□□□□ 0.98
TNFRSF1B-202ENST00000489921 PCDHB8Q9UN66 801 aa21.15■□□□□ 0.98
TNFRSF1B-202ENST00000489921 H7C4K7 107 aa21.14■□□□□ 0.97
TNFRSF1B-202ENST00000489921 OGTO15294 1046 aa21.14■□□□□ 0.97
TNFRSF1B-202ENST00000489921 GFRA3O60609 400 aa21.14■□□□□ 0.97
TNFRSF1B-202ENST00000489921 FAM13AO94988 1023 aa21.14■□□□□ 0.97
TNFRSF1B-202ENST00000489921 CYP3A5P20815 502 aa21.14■□□□□ 0.97
TNFRSF1B-202ENST00000489921 NMT1P30419 496 aaKnown RBP21.14■□□□□ 0.97
TNFRSF1B-202ENST00000489921 MCM4P33991 863 aa21.14■□□□□ 0.97
TNFRSF1B-202ENST00000489921 DDIT3P35638 169 aa21.14■□□□□ 0.97
TNFRSF1B-202ENST00000489921 LIG4P49917 911 aa21.14■□□□□ 0.97
TNFRSF1B-202ENST00000489921 GUCY2FP51841 1108 aa21.14■□□□□ 0.97
TNFRSF1B-202ENST00000489921 ARPP19P56211 112 aa21.14■□□□□ 0.97
TNFRSF1B-202ENST00000489921 GTF2BQ00403 316 aa21.14■□□□□ 0.97
TNFRSF1B-202ENST00000489921 RESTQ13127 1097 aa21.14■□□□□ 0.97
TNFRSF1B-202ENST00000489921 CTXN3Q4LDR2 81 aa21.14■□□□□ 0.97
TNFRSF1B-202ENST00000489921 PRSS36Q5K4E3 855 aa21.14■□□□□ 0.97
TNFRSF1B-202ENST00000489921 SPECC1Q5M775 1068 aa21.14■□□□□ 0.97
TNFRSF1B-202ENST00000489921 TPGS2Q68CL5 300 aa21.14■□□□□ 0.97
TNFRSF1B-202ENST00000489921 LARP4BQ92615 738 aaKnown RBP21.14■□□□□ 0.97
TNFRSF1B-202ENST00000489921 KIF12Q96FN5 646 aa21.14■□□□□ 0.97
TNFRSF1B-202ENST00000489921 BICD1Q96G01 975 aa21.14■□□□□ 0.97
TNFRSF1B-202ENST00000489921 ARHGEF3Q9NR81 526 aa21.14■□□□□ 0.97
TNFRSF1B-202ENST00000489921 FBXO2Q9UK22 296 aaPredicted RBP21.14■□□□□ 0.97
TNFRSF1B-202ENST00000489921 ZNF292O60281 2723 aa21.14■□□□□ 0.97
TNFRSF1B-202ENST00000489921 VPS37CA5D8V6 355 aaPredicted RBP21.13■□□□□ 0.97
TNFRSF1B-202ENST00000489921 ANKRD63C9JTQ0 380 aa21.13■□□□□ 0.97
TNFRSF1B-202ENST00000489921 K7ENM7 598 aa21.13■□□□□ 0.97
TNFRSF1B-202ENST00000489921 PPEF2O14830 753 aa21.13■□□□□ 0.97
TNFRSF1B-202ENST00000489921 HNRNPDLO14979 420 aaKnown RBP21.13■□□□□ 0.97
TNFRSF1B-202ENST00000489921 VNN2O95498 520 aa21.13■□□□□ 0.97
TNFRSF1B-202ENST00000489921 PTPN2P17706 415 aa21.13■□□□□ 0.97
TNFRSF1B-202ENST00000489921 SCP2P22307 547 aa21.13■□□□□ 0.97
TNFRSF1B-202ENST00000489921 MATR3P43243 847 aaKnown RBP eCLIP21.13■□□□□ 0.97
TNFRSF1B-202ENST00000489921 ANGPT1Q15389 498 aa21.13■□□□□ 0.97
TNFRSF1B-202ENST00000489921 ZC2HC1CQ53FD0 456 aaPredicted RBP21.13■□□□□ 0.97
TNFRSF1B-202ENST00000489921 FAM173BQ6P4H8 233 aa21.13■□□□□ 0.97
TNFRSF1B-202ENST00000489921 MTSS1LQ765P7 747 aa21.13■□□□□ 0.97
TNFRSF1B-202ENST00000489921 ASCL5Q7RTU5 278 aa21.13■□□□□ 0.97
TNFRSF1B-202ENST00000489921 MAP4K3Q8IVH8 894 aa21.13■□□□□ 0.97
TNFRSF1B-202ENST00000489921 TCEAL4Q96EI5 215 aa21.13■□□□□ 0.97
TNFRSF1B-202ENST00000489921 PLA2G2FQ9BZM2 168 aa21.13■□□□□ 0.97
TNFRSF1B-202ENST00000489921 CPSF3Q9UKF6 684 aaKnown RBP21.13■□□□□ 0.97
TNFRSF1B-202ENST00000489921 MRPS23Q9Y3D9 190 aaKnown RBP21.13■□□□□ 0.97
TNFRSF1B-202ENST00000489921 INSL5Q9Y5Q6 135 aa21.13■□□□□ 0.97
TNFRSF1B-202ENST00000489921 TISP43B9A030 160 aa21.12■□□□□ 0.97
TNFRSF1B-202ENST00000489921 STK25O00506 426 aa21.12■□□□□ 0.97
TNFRSF1B-202ENST00000489921 OAZ2O95190 189 aa21.12■□□□□ 0.97
TNFRSF1B-202ENST00000489921 CEBPBP17676 345 aa21.12■□□□□ 0.97
TNFRSF1B-202ENST00000489921 SYT1P21579 422 aa21.12■□□□□ 0.97
TNFRSF1B-202ENST00000489921 MARCKSP29966 332 aaPredicted RBP21.12■□□□□ 0.97
TNFRSF1B-202ENST00000489921 CCR2P41597 374 aa21.12■□□□□ 0.97
TNFRSF1B-202ENST00000489921 STARD6P59095 220 aa21.12■□□□□ 0.97
TNFRSF1B-202ENST00000489921 RNF19BQ6ZMZ0 732 aa21.12■□□□□ 0.97
TNFRSF1B-202ENST00000489921 FRMD5Q7Z6J6 570 aa21.12■□□□□ 0.97
TNFRSF1B-202ENST00000489921 APPL2Q8NEU8 664 aa21.12■□□□□ 0.97
TNFRSF1B-202ENST00000489921 BEST2Q8NFU1 509 aa21.12■□□□□ 0.97
TNFRSF1B-202ENST00000489921 MCRS1Q96EZ8 462 aa21.12■□□□□ 0.97
TNFRSF1B-202ENST00000489921 KXD1Q9BQD3 176 aa21.12■□□□□ 0.97
TNFRSF1B-202ENST00000489921 IKZF4Q9H2S9 585 aa21.12■□□□□ 0.97
TNFRSF1B-202ENST00000489921 ST6GALNAC4Q9H4F1 302 aa21.12■□□□□ 0.97
TNFRSF1B-202ENST00000489921 CYP4F11Q9HBI6 524 aa21.12■□□□□ 0.97
TNFRSF1B-202ENST00000489921 CEP72Q9P209 647 aa21.12■□□□□ 0.97
TNFRSF1B-202ENST00000489921 AFF4Q9UHB7 1163 aaKnown RBP21.12■□□□□ 0.97
TNFRSF1B-202ENST00000489921 UBQLN1Q9UMX0 589 aaKnown RBP21.12■□□□□ 0.97
TNFRSF1B-202ENST00000489921 TIMM13Q9Y5L4 95 aaPredicted RBP21.12■□□□□ 0.97
TNFRSF1B-202ENST00000489921 SRPRBQ9Y5M8 271 aaKnown RBP21.12■□□□□ 0.97
TNFRSF1B-202ENST00000489921 RIF1Q5UIP0 2472 aaKnown RBP21.12■□□□□ 0.97
TNFRSF1B-202ENST00000489921 TSC2P49815 1807 aa21.11■□□□□ 0.97
TNFRSF1B-202ENST00000489921 SCN1AP35498 2009 aa21.11■□□□□ 0.97
TNFRSF1B-202ENST00000489921 PRRG1O14668 218 aa21.11■□□□□ 0.97
TNFRSF1B-202ENST00000489921 LRG1P02750 347 aa21.11■□□□□ 0.97
TNFRSF1B-202ENST00000489921 DCNP07585 359 aaKnown RBP21.11■□□□□ 0.97
TNFRSF1B-202ENST00000489921 GLULP15104 373 aa21.11■□□□□ 0.97
TNFRSF1B-202ENST00000489921 ELF1P32519 619 aa21.11■□□□□ 0.97
TNFRSF1B-202ENST00000489921 PPP2R3AQ06190 1150 aa21.11■□□□□ 0.97
TNFRSF1B-202ENST00000489921 ADCY1Q08828 1119 aa21.11■□□□□ 0.97
TNFRSF1B-202ENST00000489921 KYAT1Q16773 422 aa21.11■□□□□ 0.97
TNFRSF1B-202ENST00000489921 SPATA1Q5VX52 437 aa21.11■□□□□ 0.97
TNFRSF1B-202ENST00000489921 ZNF280DQ6N043 979 aa21.11■□□□□ 0.97
TNFRSF1B-202ENST00000489921 CLIC6Q96NY7 704 aa21.11■□□□□ 0.97
TNFRSF1B-202ENST00000489921 CORO1BQ9BR76 489 aa21.11■□□□□ 0.97
TNFRSF1B-202ENST00000489921 MSTO1Q9BUK6 570 aa21.11■□□□□ 0.97
TNFRSF1B-202ENST00000489921 DDX23Q9BUQ8 820 aaKnown RBP21.11■□□□□ 0.97
TNFRSF1B-202ENST00000489921 STRA6Q9BX79 667 aa21.11■□□□□ 0.97
TNFRSF1B-202ENST00000489921 FOXQ1Q9C009 403 aa21.11■□□□□ 0.97
TNFRSF1B-202ENST00000489921 RPF1Q9H9Y2 349 aaKnown RBP21.11■□□□□ 0.97
TNFRSF1B-202ENST00000489921 GDE1Q9NZC3 331 aa21.11■□□□□ 0.97
TNFRSF1B-202ENST00000489921 STYXL1Q9Y6J8 313 aa21.11■□□□□ 0.97
TNFRSF1B-202ENST00000489921 MIA3Q5JRA6 1907 aa21.1■□□□□ 0.97
TNFRSF1B-202ENST00000489921 PRR23AA6NEV1 266 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms