RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 KCNV1Q6PIU1 500 aa16.72■□□□□ 0.27
BRD9-208ENST00000489816 MICALCLQ6ZW33 695 aa16.72■□□□□ 0.27
BRD9-208ENST00000489816 NCAPG2Q86XI2 1143 aa16.72■□□□□ 0.27
BRD9-208ENST00000489816 THNSL1Q8IYQ7 743 aa16.72■□□□□ 0.27
BRD9-208ENST00000489816 REPS2Q8NFH8 660 aa16.72■□□□□ 0.27
BRD9-208ENST00000489816 IPO4Q8TEX9 1081 aaKnown RBP16.72■□□□□ 0.27
BRD9-208ENST00000489816 MTMR12Q9C0I1 747 aa16.72■□□□□ 0.27
BRD9-208ENST00000489816 SUPT20HL2P0C7V6 817 aa16.72■□□□□ 0.27
BRD9-208ENST00000489816 CDR1P51861 262 aa16.72■□□□□ 0.27
BRD9-208ENST00000489816 MNAT1P51948 309 aa16.72■□□□□ 0.27
BRD9-208ENST00000489816 HIRAP54198 1017 aaPredicted RBP16.72■□□□□ 0.27
BRD9-208ENST00000489816 CUL2Q13617 745 aa16.72■□□□□ 0.27
BRD9-208ENST00000489816 GNPTABQ3T906 1256 aa16.72■□□□□ 0.27
BRD9-208ENST00000489816 SUPT20HL1Q3ZLR7 823 aa16.72■□□□□ 0.27
BRD9-208ENST00000489816 TREML2Q5T2D2 321 aa16.72■□□□□ 0.27
BRD9-208ENST00000489816 CCDC13Q8IYE1 715 aa16.72■□□□□ 0.27
BRD9-208ENST00000489816 ART4Q93070 314 aa16.72■□□□□ 0.27
BRD9-208ENST00000489816 CHMP6Q96FZ7 201 aa16.72■□□□□ 0.27
BRD9-208ENST00000489816 PDLIM7Q9NR12 457 aa16.72■□□□□ 0.27
BRD9-208ENST00000489816 ATP8B3O60423 1300 aa16.72■□□□□ 0.27
BRD9-208ENST00000489816 GOLGA8SH3BPF8 625 aa16.71■□□□□ 0.27
BRD9-208ENST00000489816 GOLGA8MH3BSY2 632 aa16.71■□□□□ 0.27
BRD9-208ENST00000489816 PLCB3Q01970 1234 aa16.71■□□□□ 0.27
BRD9-208ENST00000489816 GCNT1Q02742 428 aa16.71■□□□□ 0.27
BRD9-208ENST00000489816 TMEM132AQ24JP5 1023 aa16.71■□□□□ 0.27
BRD9-208ENST00000489816 EXOC3L1Q86VI1 746 aa16.71■□□□□ 0.27
BRD9-208ENST00000489816 CEP120Q8N960 986 aa16.71■□□□□ 0.27
BRD9-208ENST00000489816 PAIP2Q9BPZ3 127 aaKnown RBP16.71■□□□□ 0.27
BRD9-208ENST00000489816 NXF1Q9UBU9 619 aaKnown RBP16.71■□□□□ 0.27
BRD9-208ENST00000489816 ANAPC5Q9UJX4 755 aa16.71■□□□□ 0.27
BRD9-208ENST00000489816 ZNFX1Q9P2E3 1918 aaKnown RBP16.71■□□□□ 0.27
BRD9-208ENST00000489816 SPDYE16A6NNV3 312 aaPredicted RBP16.71■□□□□ 0.27
BRD9-208ENST00000489816 F8VP50 259 aa16.71■□□□□ 0.27
BRD9-208ENST00000489816 MAPK13O15264 365 aa16.71■□□□□ 0.27
BRD9-208ENST00000489816 IFNB1P01574 187 aa16.71■□□□□ 0.27
BRD9-208ENST00000489816 PGK2P07205 417 aa16.71■□□□□ 0.27
BRD9-208ENST00000489816 NUDT17P0C025 328 aa16.71■□□□□ 0.27
BRD9-208ENST00000489816 RARGP13631 454 aa16.71■□□□□ 0.27
BRD9-208ENST00000489816 HSPA6P17066 643 aa16.71■□□□□ 0.27
BRD9-208ENST00000489816 GTF2H1P32780 548 aa16.71■□□□□ 0.27
BRD9-208ENST00000489816 TFAMQ00059 246 aaKnown RBP16.71■□□□□ 0.27
BRD9-208ENST00000489816 NCOA4Q13772 614 aa16.71■□□□□ 0.27
BRD9-208ENST00000489816 SYCP2LQ5T4T6 812 aa16.71■□□□□ 0.27
BRD9-208ENST00000489816 ERMARDQ5T6L9 678 aa16.71■□□□□ 0.27
BRD9-208ENST00000489816 ARHGEF2Q92974 986 aaKnown RBP16.71■□□□□ 0.27
BRD9-208ENST00000489816 DDX27Q96GQ7 796 aaKnown RBP16.71■□□□□ 0.27
BRD9-208ENST00000489816 TIPINQ9BVW5 301 aa16.71■□□□□ 0.27
BRD9-208ENST00000489816 MYH9P35579 1960 aaKnown RBP16.71■□□□□ 0.27
BRD9-208ENST00000489816 FSCN2O14926 492 aa16.71■□□□□ 0.26
BRD9-208ENST00000489816 ATF2P15336 505 aa16.71■□□□□ 0.26
BRD9-208ENST00000489816 DRD4P21917 467 aa16.71■□□□□ 0.26
BRD9-208ENST00000489816 DRG2P55039 364 aaKnown RBP16.71■□□□□ 0.26
BRD9-208ENST00000489816 MAMLD1Q13495 774 aa16.71■□□□□ 0.26
BRD9-208ENST00000489816 SMTNL2Q2TAL5 461 aa16.71■□□□□ 0.26
BRD9-208ENST00000489816 FAM133BQ5BKY9 247 aaKnown RBP16.71■□□□□ 0.26
BRD9-208ENST00000489816 CYP4X1Q8N118 509 aa16.71■□□□□ 0.26
BRD9-208ENST00000489816 C1orf131Q8NDD1 294 aaKnown RBP16.71■□□□□ 0.26
BRD9-208ENST00000489816 PRPF31Q8WWY3 499 aaKnown RBP16.71■□□□□ 0.26
BRD9-208ENST00000489816 FHDC1Q9C0D6 1143 aaPredicted RBP16.71■□□□□ 0.26
BRD9-208ENST00000489816 TJP2Q9UDY2 1190 aa16.71■□□□□ 0.26
BRD9-208ENST00000489816 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.71■□□□□ 0.26
BRD9-208ENST00000489816 PIK3R2O00459 728 aa16.7■□□□□ 0.26
BRD9-208ENST00000489816 MTA2O94776 668 aa16.7■□□□□ 0.26
BRD9-208ENST00000489816 GARTP22102 1010 aa16.7■□□□□ 0.26
BRD9-208ENST00000489816 MYL6P60660 151 aa16.7■□□□□ 0.26
BRD9-208ENST00000489816 STXBP2Q15833 593 aa16.7■□□□□ 0.26
BRD9-208ENST00000489816 ZNF365Q70YC5 407 aa16.7■□□□□ 0.26
BRD9-208ENST00000489816 SPATA31C2B4DYI2 1134 aa16.7■□□□□ 0.26
BRD9-208ENST00000489816 OATP04181 439 aa16.7■□□□□ 0.26
BRD9-208ENST00000489816 ACO1P21399 889 aaKnown RBP16.7■□□□□ 0.26
BRD9-208ENST00000489816 KCNT1Q5JUK3 1230 aa16.7■□□□□ 0.26
BRD9-208ENST00000489816 VTI1AQ96AJ9 217 aa16.7■□□□□ 0.26
BRD9-208ENST00000489816 MCEEQ96PE7 176 aa16.7■□□□□ 0.26
BRD9-208ENST00000489816 OSBPL8Q9BZF1 889 aa16.7■□□□□ 0.26
BRD9-208ENST00000489816 DCLK3Q9C098 648 aa16.7■□□□□ 0.26
BRD9-208ENST00000489816 LRRC19Q9H756 370 aa16.7■□□□□ 0.26
BRD9-208ENST00000489816 HAUS2Q9NVX0 235 aa16.7■□□□□ 0.26
BRD9-208ENST00000489816 RGS17Q9UGC6 210 aaPredicted RBP16.7■□□□□ 0.26
BRD9-208ENST00000489816 KRT19P08727 400 aa16.69■□□□□ 0.26
BRD9-208ENST00000489816 CETPP11597 493 aa16.69■□□□□ 0.26
BRD9-208ENST00000489816 C6orf118Q5T5N4 469 aa16.69■□□□□ 0.26
BRD9-208ENST00000489816 DCAF15Q66K64 600 aa16.69■□□□□ 0.26
BRD9-208ENST00000489816 PLCD3Q8N3E9 789 aa16.69■□□□□ 0.26
BRD9-208ENST00000489816 ZNF606Q8WXB4 792 aa16.69■□□□□ 0.26
BRD9-208ENST00000489816 PLVAPQ9BX97 442 aa16.69■□□□□ 0.26
BRD9-208ENST00000489816 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.69■□□□□ 0.26
BRD9-208ENST00000489816 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.69■□□□□ 0.26
BRD9-208ENST00000489816 BANF1O75531 89 aa16.69■□□□□ 0.26
BRD9-208ENST00000489816 FNTAP49354 379 aa16.69■□□□□ 0.26
BRD9-208ENST00000489816 ZNF280AP59817 542 aaPredicted RBP16.69■□□□□ 0.26
BRD9-208ENST00000489816 NOMO3P69849 1222 aa16.69■□□□□ 0.26
BRD9-208ENST00000489816 GHRHRQ02643 423 aa16.69■□□□□ 0.26
BRD9-208ENST00000489816 CAPSQ13938 189 aa16.69■□□□□ 0.26
BRD9-208ENST00000489816 CYP1B1Q16678 543 aa16.69■□□□□ 0.26
BRD9-208ENST00000489816 C15orf39Q6ZRI6 1047 aa16.69■□□□□ 0.26
BRD9-208ENST00000489816 MON1BQ7L1V2 547 aa16.69■□□□□ 0.26
BRD9-208ENST00000489816 TEX2Q8IWB9 1127 aa16.69■□□□□ 0.26
BRD9-208ENST00000489816 SRRM1Q8IYB3 904 aaKnown RBP16.69■□□□□ 0.26
BRD9-208ENST00000489816 FAM129AQ9BZQ8 928 aa16.69■□□□□ 0.26
BRD9-208ENST00000489816 AS3MTQ9HBK9 375 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms