RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.74□□□□□ -0.53
COL21A1-211ENST00000488912 SEZ6LQ9BYH1 1024 aa11.74□□□□□ -0.53
COL21A1-211ENST00000488912 FAM105AQ9NUU6 356 aa11.74□□□□□ -0.53
COL21A1-211ENST00000488912 CNTN3Q9P232 1028 aa11.74□□□□□ -0.53
COL21A1-211ENST00000488912 PARP2Q9UGN5 583 aa11.74□□□□□ -0.53
COL21A1-211ENST00000488912 ADAMTS1Q9UHI8 967 aa11.74□□□□□ -0.53
COL21A1-211ENST00000488912 TFR2Q9UP52 801 aa11.74□□□□□ -0.53
COL21A1-211ENST00000488912 A0A087X0T9 212 aa11.73□□□□□ -0.53
COL21A1-211ENST00000488912 MEIS3P2A8K0S8 358 aa11.73□□□□□ -0.53
COL21A1-211ENST00000488912 PQBP1O60828 265 aaKnown RBP11.73□□□□□ -0.53
COL21A1-211ENST00000488912 CD4P01730 458 aa11.73□□□□□ -0.53
COL21A1-211ENST00000488912 TFRCP02786 760 aaKnown RBP11.73□□□□□ -0.53
COL21A1-211ENST00000488912 FAM228BP0C875 321 aa11.73□□□□□ -0.53
COL21A1-211ENST00000488912 ATN1P54259 1190 aaPredicted RBP11.73□□□□□ -0.53
COL21A1-211ENST00000488912 OLIG1Q8TAK6 271 aa11.73□□□□□ -0.53
COL21A1-211ENST00000488912 FAM81BQ96LP2 452 aa11.73□□□□□ -0.53
COL21A1-211ENST00000488912 ACP6Q9NPH0 428 aa11.73□□□□□ -0.53
COL21A1-211ENST00000488912 LZTFL1Q9NQ48 299 aa11.73□□□□□ -0.53
COL21A1-211ENST00000488912 DPP3Q9NY33 737 aa11.73□□□□□ -0.53
COL21A1-211ENST00000488912 TUBGCP4Q9UGJ1 667 aa11.73□□□□□ -0.53
COL21A1-211ENST00000488912 DERAQ9Y315 318 aa11.73□□□□□ -0.53
COL21A1-211ENST00000488912 TANC1Q9C0D5 1861 aa11.73□□□□□ -0.53
COL21A1-211ENST00000488912 VGLL3A8MV65 326 aa11.72□□□□□ -0.53
COL21A1-211ENST00000488912 CYP26A1O43174 497 aa11.72□□□□□ -0.53
COL21A1-211ENST00000488912 ABL1P00519 1130 aa11.72□□□□□ -0.53
COL21A1-211ENST00000488912 CCDC172P0C7W6 258 aa11.72□□□□□ -0.53
COL21A1-211ENST00000488912 TBXAS1P24557 533 aaPredicted RBP11.72□□□□□ -0.53
COL21A1-211ENST00000488912 POLR2BP30876 1174 aaKnown RBP11.72□□□□□ -0.53
COL21A1-211ENST00000488912 CTCFP49711 727 aaPredicted RBP11.72□□□□□ -0.53
COL21A1-211ENST00000488912 KRT83P78385 493 aa11.72□□□□□ -0.53
COL21A1-211ENST00000488912 SPA17Q15506 151 aa11.72□□□□□ -0.53
COL21A1-211ENST00000488912 SLC18A3Q16572 532 aa11.72□□□□□ -0.53
COL21A1-211ENST00000488912 USP38Q8NB14 1042 aa11.72□□□□□ -0.53
COL21A1-211ENST00000488912 CAGE1Q8TC20 777 aa11.72□□□□□ -0.53
COL21A1-211ENST00000488912 DIS3LQ8TF46 1054 aaKnown RBP11.72□□□□□ -0.53
COL21A1-211ENST00000488912 C18orf25Q96B23 403 aaPredicted RBP11.72□□□□□ -0.53
COL21A1-211ENST00000488912 SYT11Q9BT88 431 aa11.72□□□□□ -0.53
COL21A1-211ENST00000488912 NIF3L1Q9GZT8 377 aa11.72□□□□□ -0.53
COL21A1-211ENST00000488912 ITGA11Q9UKX5 1188 aa11.72□□□□□ -0.53
COL21A1-211ENST00000488912 SQORQ9Y6N5 450 aa11.72□□□□□ -0.53
COL21A1-211ENST00000488912 SCN5AQ14524 2016 aa11.72□□□□□ -0.53
COL21A1-211ENST00000488912 TET1Q8NFU7 2136 aa11.72□□□□□ -0.53
COL21A1-211ENST00000488912 RCCD1A6NED2 376 aa11.72□□□□□ -0.53
COL21A1-211ENST00000488912 GOLGA6L9A6NEM1 432 aa11.72□□□□□ -0.53
COL21A1-211ENST00000488912 KRT5P13647 590 aa11.72□□□□□ -0.53
COL21A1-211ENST00000488912 ACO1P21399 889 aaKnown RBP11.72□□□□□ -0.53
COL21A1-211ENST00000488912 GABPB1Q06547 395 aaPredicted RBP11.72□□□□□ -0.53
COL21A1-211ENST00000488912 DSC3Q14574 896 aa11.72□□□□□ -0.53
COL21A1-211ENST00000488912 PTPN14Q15678 1187 aa11.72□□□□□ -0.53
COL21A1-211ENST00000488912 ZBTB6Q15916 424 aa11.72□□□□□ -0.53
COL21A1-211ENST00000488912 PKN2Q16513 984 aaKnown RBP11.72□□□□□ -0.53
COL21A1-211ENST00000488912 XKR4Q5GH76 650 aa11.72□□□□□ -0.53
COL21A1-211ENST00000488912 LRRC8DQ7L1W4 858 aa11.72□□□□□ -0.53
COL21A1-211ENST00000488912 SLC47A2Q86VL8 602 aa11.72□□□□□ -0.53
COL21A1-211ENST00000488912 SLC20A1Q8WUM9 679 aa11.72□□□□□ -0.53
COL21A1-211ENST00000488912 IFIH1Q9BYX4 1025 aaKnown RBP11.72□□□□□ -0.53
COL21A1-211ENST00000488912 SMIM28A0A1B0GU29 152 aa11.71□□□□□ -0.53
COL21A1-211ENST00000488912 SELPP16109 830 aa11.71□□□□□ -0.53
COL21A1-211ENST00000488912 ARHGAP25P42331 645 aa11.71□□□□□ -0.53
COL21A1-211ENST00000488912 ASPAP45381 313 aa11.71□□□□□ -0.53
COL21A1-211ENST00000488912 SCARA5Q6ZMJ2 495 aa11.71□□□□□ -0.53
COL21A1-211ENST00000488912 KIAA1328Q86T90 577 aa11.71□□□□□ -0.53
COL21A1-211ENST00000488912 EPS8L1Q8TE68 723 aa11.71□□□□□ -0.53
COL21A1-211ENST00000488912 LPPQ93052 612 aa11.71□□□□□ -0.53
COL21A1-211ENST00000488912 ZFP42Q96MM3 310 aa11.71□□□□□ -0.53
COL21A1-211ENST00000488912 ADAM2Q99965 735 aa11.71□□□□□ -0.53
COL21A1-211ENST00000488912 NXF1Q9UBU9 619 aaKnown RBP11.71□□□□□ -0.53
COL21A1-211ENST00000488912 TRIM10Q9UDY6 481 aa11.71□□□□□ -0.53
COL21A1-211ENST00000488912 AGAP1Q9UPQ3 857 aa11.71□□□□□ -0.53
COL21A1-211ENST00000488912 PCDHA13Q9Y5I0 950 aa11.71□□□□□ -0.53
COL21A1-211ENST00000488912 TDRD15B5MCY1 1934 aaKnown RBP11.71□□□□□ -0.53
COL21A1-211ENST00000488912 DDX3XO00571 662 aaKnown RBP eCLIP11.71□□□□□ -0.54
COL21A1-211ENST00000488912 KCNE1P15382 129 aa11.71□□□□□ -0.54
COL21A1-211ENST00000488912 MLH1P40692 756 aa11.71□□□□□ -0.54
COL21A1-211ENST00000488912 VAV2P52735 878 aa11.71□□□□□ -0.54
COL21A1-211ENST00000488912 BFSP2Q13515 415 aa11.71□□□□□ -0.54
COL21A1-211ENST00000488912 WDR72Q3MJ13 1102 aa11.71□□□□□ -0.54
COL21A1-211ENST00000488912 ARHGAP29Q52LW3 1261 aa11.71□□□□□ -0.54
COL21A1-211ENST00000488912 SLC39A5Q6ZMH5 540 aa11.71□□□□□ -0.54
COL21A1-211ENST00000488912 NOP9Q86U38 636 aaKnown RBP11.71□□□□□ -0.54
COL21A1-211ENST00000488912 VPS36Q86VN1 386 aa11.71□□□□□ -0.54
COL21A1-211ENST00000488912 GLYCTKQ8IVS8 523 aa11.71□□□□□ -0.54
COL21A1-211ENST00000488912 LNX1Q8TBB1 728 aaPredicted RBP11.71□□□□□ -0.54
COL21A1-211ENST00000488912 TAF4BQ92750 862 aa11.71□□□□□ -0.54
COL21A1-211ENST00000488912 JAKMIP2Q96AA8 810 aa11.71□□□□□ -0.54
COL21A1-211ENST00000488912 HPDLQ96IR7 371 aa11.71□□□□□ -0.54
COL21A1-211ENST00000488912 TRAIPQ9BWF2 469 aa11.71□□□□□ -0.54
COL21A1-211ENST00000488912 LACRTQ9GZZ8 138 aa11.71□□□□□ -0.54
COL21A1-211ENST00000488912 NOCTQ9UK39 431 aaKnown RBP11.71□□□□□ -0.54
COL21A1-211ENST00000488912 POLIQ9UNA4 740 aa11.71□□□□□ -0.54
COL21A1-211ENST00000488912 PTGESO14684 152 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 PPEF2O14830 753 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 CTIFO43310 598 aaKnown RBP11.7□□□□□ -0.54
COL21A1-211ENST00000488912 CALCAP01258 141 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 ITGA4P13612 1032 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 TNNT1P13805 278 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 ATF7P17544 494 aaPredicted RBP11.7□□□□□ -0.54
COL21A1-211ENST00000488912 ANXA13P27216 316 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 GJA8P48165 433 aa11.7□□□□□ -0.54
COL21A1-211ENST00000488912 RBP5P82980 135 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms