RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 MCL1Q07820 350 aa20.11■□□□□ 0.81
HDAC6-231ENST00000488905 SLC10A6Q3KNW5 377 aa20.11■□□□□ 0.81
HDAC6-231ENST00000488905 CTXN3Q4LDR2 81 aa20.11■□□□□ 0.81
HDAC6-231ENST00000488905 PRSS36Q5K4E3 855 aa20.11■□□□□ 0.81
HDAC6-231ENST00000488905 TPGS2Q68CL5 300 aa20.11■□□□□ 0.81
HDAC6-231ENST00000488905 POTEHQ6S545 545 aa20.11■□□□□ 0.81
HDAC6-231ENST00000488905 ZPBP2Q6X784 338 aa20.11■□□□□ 0.81
HDAC6-231ENST00000488905 CORO1BQ9BR76 489 aa20.11■□□□□ 0.81
HDAC6-231ENST00000488905 LTB4R2Q9NPC1 389 aa20.11■□□□□ 0.81
HDAC6-231ENST00000488905 KCNG1Q9UIX4 513 aa20.11■□□□□ 0.81
HDAC6-231ENST00000488905 VWA3AA6NCI4 1184 aa20.1■□□□□ 0.81
HDAC6-231ENST00000488905 SEC24AO95486 1093 aa20.1■□□□□ 0.81
HDAC6-231ENST00000488905 CXCL8P10145 99 aa20.1■□□□□ 0.81
HDAC6-231ENST00000488905 FCARP24071 287 aa20.1■□□□□ 0.81
HDAC6-231ENST00000488905 MAGEA9P43362 315 aa20.1■□□□□ 0.81
HDAC6-231ENST00000488905 RABEP1Q15276 862 aa20.1■□□□□ 0.81
HDAC6-231ENST00000488905 TPRG1Q6ZUI0 275 aa20.1■□□□□ 0.81
HDAC6-231ENST00000488905 MAML2Q8IZL2 1156 aaPredicted RBP20.1■□□□□ 0.81
HDAC6-231ENST00000488905 APPL2Q8NEU8 664 aa20.1■□□□□ 0.81
HDAC6-231ENST00000488905 DDX12PQ92771 950 aa20.1■□□□□ 0.81
HDAC6-231ENST00000488905 ELSPBP1Q96BH3 223 aa20.1■□□□□ 0.81
HDAC6-231ENST00000488905 TCEAL4Q96EI5 215 aa20.1■□□□□ 0.81
HDAC6-231ENST00000488905 CDK5RAP3Q96JB5 506 aa20.1■□□□□ 0.81
HDAC6-231ENST00000488905 TBC1D32Q96NH3 1257 aa20.1■□□□□ 0.81
HDAC6-231ENST00000488905 PLIN2Q99541 437 aa20.1■□□□□ 0.81
HDAC6-231ENST00000488905 PLA2G2FQ9BZM2 168 aa20.1■□□□□ 0.81
HDAC6-231ENST00000488905 MTF2Q9Y483 593 aaPredicted RBP20.1■□□□□ 0.81
HDAC6-231ENST00000488905 TCHHQ07283 1943 aa20.1■□□□□ 0.81
HDAC6-231ENST00000488905 CLDN3O15551 220 aa20.09■□□□□ 0.81
HDAC6-231ENST00000488905 PLA2G4BP0C869 781 aa20.09■□□□□ 0.81
HDAC6-231ENST00000488905 CD72P21854 359 aa20.09■□□□□ 0.81
HDAC6-231ENST00000488905 MATR3P43243 847 aaKnown RBP eCLIP20.09■□□□□ 0.81
HDAC6-231ENST00000488905 ID4P47928 161 aa20.09■□□□□ 0.81
HDAC6-231ENST00000488905 NCKAP1LP55160 1127 aa20.09■□□□□ 0.81
HDAC6-231ENST00000488905 CACNB1Q02641 598 aaPredicted RBP20.09■□□□□ 0.81
HDAC6-231ENST00000488905 TMEM119Q4V9L6 283 aa20.09■□□□□ 0.81
HDAC6-231ENST00000488905 TANGO2Q6ICL3 276 aa20.09■□□□□ 0.81
HDAC6-231ENST00000488905 PDZD4Q76G19 769 aaPredicted RBP20.09■□□□□ 0.81
HDAC6-231ENST00000488905 SPATA6Q9NWH7 488 aaPredicted RBP20.09■□□□□ 0.81
HDAC6-231ENST00000488905 AFF4Q9UHB7 1163 aaKnown RBP20.09■□□□□ 0.81
HDAC6-231ENST00000488905 PCDHB8Q9UN66 801 aa20.09■□□□□ 0.81
HDAC6-231ENST00000488905 NUP210Q8TEM1 1887 aaPredicted RBP20.09■□□□□ 0.81
HDAC6-231ENST00000488905 FAM170BA6NMN3 283 aa20.08■□□□□ 0.81
HDAC6-231ENST00000488905 H0YCG3 227 aa20.08■□□□□ 0.81
HDAC6-231ENST00000488905 ZNF197O14709 1029 aa20.08■□□□□ 0.81
HDAC6-231ENST00000488905 MICAL2O94851 1124 aa20.08■□□□□ 0.81
HDAC6-231ENST00000488905 CPB1P15086 417 aa20.08■□□□□ 0.81
HDAC6-231ENST00000488905 CCR2P41597 374 aa20.08■□□□□ 0.81
HDAC6-231ENST00000488905 ADCY1Q08828 1119 aa20.08■□□□□ 0.81
HDAC6-231ENST00000488905 ZNF528Q3MIS6 628 aa20.08■□□□□ 0.81
HDAC6-231ENST00000488905 ARL6IP4Q66PJ3 421 aaKnown RBP20.08■□□□□ 0.81
HDAC6-231ENST00000488905 ELMOD1Q8N336 334 aa20.08■□□□□ 0.81
HDAC6-231ENST00000488905 TMEM130Q8N3G9 435 aa20.08■□□□□ 0.81
HDAC6-231ENST00000488905 DNASE1L2Q92874 299 aa20.08■□□□□ 0.81
HDAC6-231ENST00000488905 BICD1Q96G01 975 aa20.08■□□□□ 0.81
HDAC6-231ENST00000488905 HAPLN2Q9GZV7 340 aa20.08■□□□□ 0.81
HDAC6-231ENST00000488905 HEBP1Q9NRV9 189 aa20.08■□□□□ 0.81
HDAC6-231ENST00000488905 LARSQ9P2J5 1176 aaKnown RBP20.08■□□□□ 0.81
HDAC6-231ENST00000488905 NPHP3-ACAD11A0A0J9YXS1 232 aa20.07■□□□□ 0.8
HDAC6-231ENST00000488905 M0QZQ0 153 aa20.07■□□□□ 0.8
HDAC6-231ENST00000488905 NRG2O14511 850 aaPredicted RBP20.07■□□□□ 0.8
HDAC6-231ENST00000488905 LAMTOR5O43504 91 aa20.07■□□□□ 0.8
HDAC6-231ENST00000488905 CLTAP09496 248 aa20.07■□□□□ 0.8
HDAC6-231ENST00000488905 TARSP26639 723 aaKnown RBP20.07■□□□□ 0.8
HDAC6-231ENST00000488905 TWF1Q12792 350 aa20.07■□□□□ 0.8
HDAC6-231ENST00000488905 FAM78AQ5JUQ0 283 aa20.07■□□□□ 0.8
HDAC6-231ENST00000488905 ZBTB41Q5SVQ8 909 aa20.07■□□□□ 0.8
HDAC6-231ENST00000488905 ERMP1Q7Z2K6 904 aa20.07■□□□□ 0.8
HDAC6-231ENST00000488905 KCNN1Q92952 543 aa20.07■□□□□ 0.8
HDAC6-231ENST00000488905 KIF12Q96FN5 646 aa20.07■□□□□ 0.8
HDAC6-231ENST00000488905 ASB16Q96NS5 453 aa20.07■□□□□ 0.8
HDAC6-231ENST00000488905 PLEKHA5Q9HAU0 1116 aa20.07■□□□□ 0.8
HDAC6-231ENST00000488905 FBXO4Q9UKT5 387 aa20.07■□□□□ 0.8
HDAC6-231ENST00000488905 ODF2LQ9ULJ1 636 aa20.07■□□□□ 0.8
HDAC6-231ENST00000488905 MAFFQ9ULX9 164 aa20.07■□□□□ 0.8
HDAC6-231ENST00000488905 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.07■□□□□ 0.8
HDAC6-231ENST00000488905 SCN1AP35498 2009 aa20.07■□□□□ 0.8
HDAC6-231ENST00000488905 TTC26A0AVF1 554 aa20.06■□□□□ 0.8
HDAC6-231ENST00000488905 H3BQV1 296 aa20.06■□□□□ 0.8
HDAC6-231ENST00000488905 KINO60870 393 aaKnown RBP20.06■□□□□ 0.8
HDAC6-231ENST00000488905 GJB2P29033 226 aa20.06■□□□□ 0.8
HDAC6-231ENST00000488905 LRPAP1P30533 357 aa20.06■□□□□ 0.8
HDAC6-231ENST00000488905 TNFSF9P41273 254 aa20.06■□□□□ 0.8
HDAC6-231ENST00000488905 YWHAHQ04917 246 aaPredicted RBP20.06■□□□□ 0.8
HDAC6-231ENST00000488905 PPP2R3AQ06190 1150 aa20.06■□□□□ 0.8
HDAC6-231ENST00000488905 SPAG1Q07617 926 aa20.06■□□□□ 0.8
HDAC6-231ENST00000488905 GRM2Q14416 872 aa20.06■□□□□ 0.8
HDAC6-231ENST00000488905 ARSHQ5FYA8 562 aa20.06■□□□□ 0.8
HDAC6-231ENST00000488905 CYP4A22Q5TCH4 519 aa20.06■□□□□ 0.8
HDAC6-231ENST00000488905 IQCEQ6IPM2 695 aa20.06■□□□□ 0.8
HDAC6-231ENST00000488905 ZNF852Q6ZMS4 543 aa20.06■□□□□ 0.8
HDAC6-231ENST00000488905 RNF19BQ6ZMZ0 732 aa20.06■□□□□ 0.8
HDAC6-231ENST00000488905 CLDN23Q96B33 292 aa20.06■□□□□ 0.8
HDAC6-231ENST00000488905 TMX3Q96JJ7 454 aa20.06■□□□□ 0.8
HDAC6-231ENST00000488905 HINFPQ9BQA5 517 aa20.06■□□□□ 0.8
HDAC6-231ENST00000488905 REEP2Q9BRK0 252 aa20.06■□□□□ 0.8
HDAC6-231ENST00000488905 ZFP14Q9HCL3 533 aa20.06■□□□□ 0.8
HDAC6-231ENST00000488905 ASAH2Q9NR71 780 aa20.06■□□□□ 0.8
HDAC6-231ENST00000488905 CEP72Q9P209 647 aa20.06■□□□□ 0.8
HDAC6-231ENST00000488905 UBQLN1Q9UMX0 589 aaKnown RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms