RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 MYLIPQ8WY64 445 aa13.69□□□□□ -0.22
NELFE-209ENST00000488426 PPP1R16BQ96T49 567 aa13.69□□□□□ -0.22
NELFE-209ENST00000488426 STXBP5LQ9Y2K9 1186 aa13.69□□□□□ -0.22
NELFE-209ENST00000488426 TULP1O00294 542 aaPredicted RBP13.68□□□□□ -0.22
NELFE-209ENST00000488426 PITPNM1O00562 1244 aa13.68□□□□□ -0.22
NELFE-209ENST00000488426 NBNO60934 754 aa13.68□□□□□ -0.22
NELFE-209ENST00000488426 HLA-DRAP01903 254 aa13.68□□□□□ -0.22
NELFE-209ENST00000488426 CLTAP09496 248 aa13.68□□□□□ -0.22
NELFE-209ENST00000488426 PIK3CAP42336 1068 aa13.68□□□□□ -0.22
NELFE-209ENST00000488426 MAGEA1P43355 309 aa13.68□□□□□ -0.22
NELFE-209ENST00000488426 BIRC3Q13489 604 aa13.68□□□□□ -0.22
NELFE-209ENST00000488426 BMS1Q14692 1282 aaKnown RBP13.68□□□□□ -0.22
NELFE-209ENST00000488426 SEZ6Q53EL9 994 aa13.68□□□□□ -0.22
NELFE-209ENST00000488426 WDR44Q5JSH3 913 aa13.68□□□□□ -0.22
NELFE-209ENST00000488426 ZNF618Q5T7W0 954 aa13.68□□□□□ -0.22
NELFE-209ENST00000488426 RUFY4Q6ZNE9 571 aa13.68□□□□□ -0.22
NELFE-209ENST00000488426 ZNF571Q7Z3V5 609 aaPredicted RBP13.68□□□□□ -0.22
NELFE-209ENST00000488426 TMCO2Q7Z6W1 182 aaPredicted RBP13.68□□□□□ -0.22
NELFE-209ENST00000488426 GPIHBP1Q8IV16 184 aa13.68□□□□□ -0.22
NELFE-209ENST00000488426 PPM1KQ8N3J5 372 aa13.68□□□□□ -0.22
NELFE-209ENST00000488426 HELQQ8TDG4 1101 aa13.68□□□□□ -0.22
NELFE-209ENST00000488426 C1orf112Q9NSG2 853 aa13.68□□□□□ -0.22
NELFE-209ENST00000488426 GBF1Q92538 1859 aa13.68□□□□□ -0.22
NELFE-209ENST00000488426 A0A087X0T9 212 aa13.67□□□□□ -0.22
NELFE-209ENST00000488426 A0A1B0GUA9 196 aa13.67□□□□□ -0.22
NELFE-209ENST00000488426 ZBBXA8MT70 800 aa13.67□□□□□ -0.22
NELFE-209ENST00000488426 FOXN3O00409 490 aaPredicted RBP13.67□□□□□ -0.22
NELFE-209ENST00000488426 PJA2O43164 708 aa13.67□□□□□ -0.22
NELFE-209ENST00000488426 LRRN2O75325 713 aa13.67□□□□□ -0.22
NELFE-209ENST00000488426 FAM228BP0C875 321 aa13.67□□□□□ -0.22
NELFE-209ENST00000488426 DARSP14868 501 aaKnown RBP13.67□□□□□ -0.22
NELFE-209ENST00000488426 CASQ1P31415 396 aa13.67□□□□□ -0.22
NELFE-209ENST00000488426 NCBP1Q09161 790 aaKnown RBP13.67□□□□□ -0.22
NELFE-209ENST00000488426 ENOX2Q16206 610 aaKnown RBP13.67□□□□□ -0.22
NELFE-209ENST00000488426 LMBRD2Q68DH5 695 aaPredicted RBP13.67□□□□□ -0.22
NELFE-209ENST00000488426 TAF2Q6P1X5 1199 aa13.67□□□□□ -0.22
NELFE-209ENST00000488426 THNSL1Q8IYQ7 743 aa13.67□□□□□ -0.22
NELFE-209ENST00000488426 RPUSD2Q8IZ73 545 aaKnown RBP13.67□□□□□ -0.22
NELFE-209ENST00000488426 SHC3Q92529 594 aa13.67□□□□□ -0.22
NELFE-209ENST00000488426 KREMEN1Q96MU8 473 aa13.67□□□□□ -0.22
NELFE-209ENST00000488426 ADPGKQ9BRR6 497 aa13.67□□□□□ -0.22
NELFE-209ENST00000488426 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.67□□□□□ -0.22
NELFE-209ENST00000488426 RPF1Q9H9Y2 349 aaKnown RBP13.67□□□□□ -0.22
NELFE-209ENST00000488426 ADAMTS1Q9UHI8 967 aa13.67□□□□□ -0.22
NELFE-209ENST00000488426 RCCD1A6NED2 376 aa13.67□□□□□ -0.22
NELFE-209ENST00000488426 CSDE1O75534 798 aaKnown RBP13.67□□□□□ -0.22
NELFE-209ENST00000488426 VNN1O95497 513 aa13.67□□□□□ -0.22
NELFE-209ENST00000488426 RPLP2P05387 115 aaKnown RBP13.67□□□□□ -0.22
NELFE-209ENST00000488426 PNMA6AP0CW24 399 aaPredicted RBP13.67□□□□□ -0.22
NELFE-209ENST00000488426 BFSP2Q13515 415 aa13.67□□□□□ -0.22
NELFE-209ENST00000488426 DUOXA2Q1HG44 320 aa13.67□□□□□ -0.22
NELFE-209ENST00000488426 DCAF4L1Q3SXM0 396 aa13.67□□□□□ -0.22
NELFE-209ENST00000488426 SMYD5Q6GMV2 418 aa13.67□□□□□ -0.22
NELFE-209ENST00000488426 FAM71AQ8IYT1 594 aa13.67□□□□□ -0.22
NELFE-209ENST00000488426 OR5B17Q8NGF7 314 aa13.67□□□□□ -0.22
NELFE-209ENST00000488426 DNAJB3Q8WWF6 145 aa13.67□□□□□ -0.22
NELFE-209ENST00000488426 TIFAQ96CG3 184 aa13.67□□□□□ -0.22
NELFE-209ENST00000488426 CPB2Q96IY4 423 aa13.67□□□□□ -0.22
NELFE-209ENST00000488426 WDR24Q96S15 920 aa13.67□□□□□ -0.22
NELFE-209ENST00000488426 LACRTQ9GZZ8 138 aa13.67□□□□□ -0.22
NELFE-209ENST00000488426 ZNF576Q9H609 170 aa13.67□□□□□ -0.22
NELFE-209ENST00000488426 GUCA1BQ9UMX6 200 aa13.67□□□□□ -0.22
NELFE-209ENST00000488426 PHACTR2O75167 634 aa13.66□□□□□ -0.22
NELFE-209ENST00000488426 ARHGEF15O94989 841 aa13.66□□□□□ -0.22
NELFE-209ENST00000488426 ABL1P00519 1130 aa13.66□□□□□ -0.22
NELFE-209ENST00000488426 SELPP16109 830 aa13.66□□□□□ -0.22
NELFE-209ENST00000488426 EIF4BP23588 611 aaKnown RBP13.66□□□□□ -0.22
NELFE-209ENST00000488426 AXLP30530 894 aa13.66□□□□□ -0.22
NELFE-209ENST00000488426 ZNF569Q5MCW4 686 aa13.66□□□□□ -0.22
NELFE-209ENST00000488426 LRRC8DQ7L1W4 858 aa13.66□□□□□ -0.22
NELFE-209ENST00000488426 SERINC5Q86VE9 423 aa13.66□□□□□ -0.22
NELFE-209ENST00000488426 CDR2LQ86X02 465 aaPredicted RBP13.66□□□□□ -0.22
NELFE-209ENST00000488426 CEP120Q8N960 986 aa13.66□□□□□ -0.22
NELFE-209ENST00000488426 SYT11Q9BT88 431 aa13.66□□□□□ -0.22
NELFE-209ENST00000488426 IRX2Q9BZI1 471 aaPredicted RBP13.66□□□□□ -0.22
NELFE-209ENST00000488426 IMPG2Q9BZV3 1241 aa13.66□□□□□ -0.22
NELFE-209ENST00000488426 NKX2-4Q9H2Z4 354 aa13.66□□□□□ -0.22
NELFE-209ENST00000488426 TRIM10Q9UDY6 481 aa13.66□□□□□ -0.22
NELFE-209ENST00000488426 NENFQ9UMX5 172 aa13.66□□□□□ -0.22
NELFE-209ENST00000488426 SLC4A7Q9Y6M7 1214 aa13.66□□□□□ -0.22
NELFE-209ENST00000488426 RALGAPA2Q2PPJ7 1873 aa13.66□□□□□ -0.22
NELFE-209ENST00000488426 STAG3L1P0CL83 205 aa13.65□□□□□ -0.22
NELFE-209ENST00000488426 CRYBB1P53674 252 aaPredicted RBP13.65□□□□□ -0.22
NELFE-209ENST00000488426 TMEM62Q0P6H9 643 aa13.65□□□□□ -0.22
NELFE-209ENST00000488426 PTK7Q13308 1070 aa13.65□□□□□ -0.22
NELFE-209ENST00000488426 NCOA4Q13772 614 aa13.65□□□□□ -0.22
NELFE-209ENST00000488426 NAB2Q15742 525 aa13.65□□□□□ -0.22
NELFE-209ENST00000488426 CATSPER4Q7RTX7 472 aa13.65□□□□□ -0.22
NELFE-209ENST00000488426 SPRED2Q7Z698 418 aa13.65□□□□□ -0.22
NELFE-209ENST00000488426 MYRIPQ8NFW9 859 aa13.65□□□□□ -0.22
NELFE-209ENST00000488426 CAGE1Q8TC20 777 aa13.65□□□□□ -0.22
NELFE-209ENST00000488426 KAT5Q92993 513 aa13.65□□□□□ -0.22
NELFE-209ENST00000488426 FAM212AQ96EL1 285 aa13.65□□□□□ -0.22
NELFE-209ENST00000488426 ANKRD36BP1Q96IX9 119 aa13.65□□□□□ -0.22
NELFE-209ENST00000488426 OSMRQ99650 979 aa13.65□□□□□ -0.22
NELFE-209ENST00000488426 ASB7Q9H672 318 aa13.65□□□□□ -0.22
NELFE-209ENST00000488426 NAGPAQ9UK23 515 aa13.65□□□□□ -0.22
NELFE-209ENST00000488426 RIOK3O14730 519 aaKnown RBP13.65□□□□□ -0.22
NELFE-209ENST00000488426 FANCGO15287 622 aa13.65□□□□□ -0.22
NELFE-209ENST00000488426 TNNC2P02585 160 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms