RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 ZNF507Q8TCN5 953 aa25.69■■□□□ 1.7
RHBDD3-205ENST00000488106 SCFD1Q8WVM8 642 aa25.69■■□□□ 1.7
RHBDD3-205ENST00000488106 ASB7Q9H672 318 aa25.69■■□□□ 1.7
RHBDD3-205ENST00000488106 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.69■■□□□ 1.7
RHBDD3-205ENST00000488106 GOLGA6L4A6NEF3 574 aa25.68■■□□□ 1.7
RHBDD3-205ENST00000488106 TGM5O43548 720 aa25.68■■□□□ 1.7
RHBDD3-205ENST00000488106 ANP32AP39687 249 aaKnown RBP25.68■■□□□ 1.7
RHBDD3-205ENST00000488106 ITIH3Q06033 890 aa25.68■■□□□ 1.7
RHBDD3-205ENST00000488106 SPATA1Q5VX52 437 aa25.68■■□□□ 1.7
RHBDD3-205ENST00000488106 GJD3Q8N144 294 aa25.68■■□□□ 1.7
RHBDD3-205ENST00000488106 TSPAN18Q96SJ8 248 aa25.68■■□□□ 1.7
RHBDD3-205ENST00000488106 POP1Q99575 1024 aaKnown RBP25.68■■□□□ 1.7
RHBDD3-205ENST00000488106 CLSTN3Q9BQT9 956 aa25.68■■□□□ 1.7
RHBDD3-205ENST00000488106 ADAM7Q9H2U9 754 aa25.68■■□□□ 1.7
RHBDD3-205ENST00000488106 RBAKQ9NYW8 714 aaPredicted RBP25.68■■□□□ 1.7
RHBDD3-205ENST00000488106 DERAQ9Y315 318 aa25.68■■□□□ 1.7
RHBDD3-205ENST00000488106 PPEF2O14830 753 aa25.67■■□□□ 1.7
RHBDD3-205ENST00000488106 ADAM12O43184 909 aa25.67■■□□□ 1.7
RHBDD3-205ENST00000488106 EXTL3O43909 919 aa25.67■■□□□ 1.7
RHBDD3-205ENST00000488106 IL18RAPO95256 599 aa25.67■■□□□ 1.7
RHBDD3-205ENST00000488106 LDHAP00338 332 aaKnown RBP25.67■■□□□ 1.7
RHBDD3-205ENST00000488106 WNT7BP56706 349 aa25.67■■□□□ 1.7
RHBDD3-205ENST00000488106 KMT5BQ4FZB7 885 aa25.67■■□□□ 1.7
RHBDD3-205ENST00000488106 ELMSAN1Q6PJG2 1045 aa25.67■■□□□ 1.7
RHBDD3-205ENST00000488106 KRBA2Q6ZNG9 492 aa25.67■■□□□ 1.7
RHBDD3-205ENST00000488106 BRSK2Q8IWQ3 736 aa25.67■■□□□ 1.7
RHBDD3-205ENST00000488106 EFCAB13Q8IY85 973 aa25.67■■□□□ 1.7
RHBDD3-205ENST00000488106 GPD1LQ8N335 351 aa25.67■■□□□ 1.7
RHBDD3-205ENST00000488106 SUSD3Q96L08 255 aa25.67■■□□□ 1.7
RHBDD3-205ENST00000488106 MTRRQ9UBK8 725 aa25.67■■□□□ 1.7
RHBDD3-205ENST00000488106 C2CD2Q9Y426 696 aa25.67■■□□□ 1.7
RHBDD3-205ENST00000488106 ZNF202O95125 648 aa25.66■■□□□ 1.7
RHBDD3-205ENST00000488106 SP100P23497 879 aaPredicted RBP25.66■■□□□ 1.7
RHBDD3-205ENST00000488106 VARS2Q5ST30 1063 aaKnown RBP25.66■■□□□ 1.7
RHBDD3-205ENST00000488106 ANKS3Q6ZW76 656 aa25.66■■□□□ 1.7
RHBDD3-205ENST00000488106 CDY1Q9Y6F8 540 aa25.66■■□□□ 1.7
RHBDD3-205ENST00000488106 SYN3O14994 580 aa25.65■■□□□ 1.7
RHBDD3-205ENST00000488106 MYL1P05976 194 aa25.65■■□□□ 1.7
RHBDD3-205ENST00000488106 POU5F1Q01860 360 aaKnown RBP25.65■■□□□ 1.7
RHBDD3-205ENST00000488106 C9orf57Q5W0N0 161 aa25.65■■□□□ 1.7
RHBDD3-205ENST00000488106 KIAA0895Q8NCT3 520 aa25.65■■□□□ 1.7
RHBDD3-205ENST00000488106 RPGRIP1Q96KN7 1286 aa25.65■■□□□ 1.7
RHBDD3-205ENST00000488106 RIPOR3Q96MK2 946 aa25.65■■□□□ 1.7
RHBDD3-205ENST00000488106 PHF7Q9BWX1 381 aaPredicted RBP25.65■■□□□ 1.7
RHBDD3-205ENST00000488106 POMKQ9H5K3 350 aa25.65■■□□□ 1.7
RHBDD3-205ENST00000488106 AGPAT3Q9NRZ7 376 aa25.65■■□□□ 1.7
RHBDD3-205ENST00000488106 HSPBP1Q9NZL4 362 aa25.65■■□□□ 1.7
RHBDD3-205ENST00000488106 CIZ1Q9ULV3 898 aaPredicted RBP25.65■■□□□ 1.7
RHBDD3-205ENST00000488106 CLIC2O15247 247 aa25.64■■□□□ 1.7
RHBDD3-205ENST00000488106 TGFB1I1O43294 461 aa25.64■■□□□ 1.7
RHBDD3-205ENST00000488106 RFPL2O75678 378 aa25.64■■□□□ 1.7
RHBDD3-205ENST00000488106 RPN1P04843 607 aaKnown RBP25.64■■□□□ 1.7
RHBDD3-205ENST00000488106 OR1D2P34982 312 aa25.64■■□□□ 1.7
RHBDD3-205ENST00000488106 MTHFRP42898 656 aa25.64■■□□□ 1.7
RHBDD3-205ENST00000488106 CYP2J2P51589 502 aa25.64■■□□□ 1.7
RHBDD3-205ENST00000488106 STK4Q13043 487 aa25.64■■□□□ 1.7
RHBDD3-205ENST00000488106 BMT2Q1RMZ1 405 aa25.64■■□□□ 1.7
RHBDD3-205ENST00000488106 RSPO2Q6UXX9 243 aaPredicted RBP25.64■■□□□ 1.7
RHBDD3-205ENST00000488106 KREMEN2Q8NCW0 462 aa25.64■■□□□ 1.7
RHBDD3-205ENST00000488106 FAM84AQ96KN4 292 aa25.64■■□□□ 1.7
RHBDD3-205ENST00000488106 TSHZ2Q9NRE2 1034 aa25.64■■□□□ 1.7
RHBDD3-205ENST00000488106 DPP3Q9NY33 737 aa25.64■■□□□ 1.7
RHBDD3-205ENST00000488106 DPP7Q9UHL4 492 aa25.64■■□□□ 1.7
RHBDD3-205ENST00000488106 NOTCH4Q99466 2003 aa25.63■■□□□ 1.69
RHBDD3-205ENST00000488106 C19orf67A6NJJ6 358 aa25.63■■□□□ 1.69
RHBDD3-205ENST00000488106 KIAA0391O15091 583 aaKnown RBP25.63■■□□□ 1.69
RHBDD3-205ENST00000488106 TFAMQ00059 246 aaKnown RBP25.63■■□□□ 1.69
RHBDD3-205ENST00000488106 LILRA6Q6PI73 481 aa25.63■■□□□ 1.69
RHBDD3-205ENST00000488106 DSTYKQ6XUX3 929 aa25.63■■□□□ 1.69
RHBDD3-205ENST00000488106 HS2ST1Q7LGA3 356 aa25.63■■□□□ 1.69
RHBDD3-205ENST00000488106 CBWD2Q8IUF1 395 aa25.63■■□□□ 1.69
RHBDD3-205ENST00000488106 NECTIN4Q96NY8 510 aa25.63■■□□□ 1.69
RHBDD3-205ENST00000488106 PLEKHA4Q9H4M7 779 aa25.63■■□□□ 1.69
RHBDD3-205ENST00000488106 PDE11AQ9HCR9 933 aa25.63■■□□□ 1.69
RHBDD3-205ENST00000488106 FBXW11Q9UKB1 542 aa25.63■■□□□ 1.69
RHBDD3-205ENST00000488106 PCDHB8Q9UN66 801 aa25.63■■□□□ 1.69
RHBDD3-205ENST00000488106 BACE2Q9Y5Z0 518 aa25.63■■□□□ 1.69
RHBDD3-205ENST00000488106 DPYDQ12882 1025 aa25.62■■□□□ 1.69
RHBDD3-205ENST00000488106 KNOP1Q1ED39 458 aaKnown RBP25.62■■□□□ 1.69
RHBDD3-205ENST00000488106 ATAT1Q5SQI0 421 aa25.62■■□□□ 1.69
RHBDD3-205ENST00000488106 GPR149Q86SP6 731 aa25.62■■□□□ 1.69
RHBDD3-205ENST00000488106 FMR1NBQ8N0W7 255 aaPredicted RBP25.62■■□□□ 1.69
RHBDD3-205ENST00000488106 APPL2Q8NEU8 664 aa25.62■■□□□ 1.69
RHBDD3-205ENST00000488106 KHSRPQ92945 711 aaKnown RBP eCLIP25.62■■□□□ 1.69
RHBDD3-205ENST00000488106 CCDC47Q96A33 483 aaKnown RBP25.62■■□□□ 1.69
RHBDD3-205ENST00000488106 TIMM13Q9Y5L4 95 aaPredicted RBP25.62■■□□□ 1.69
RHBDD3-205ENST00000488106 CCDC195A0A1B0GUA6 201 aa25.61■■□□□ 1.69
RHBDD3-205ENST00000488106 M0QZQ0 153 aa25.61■■□□□ 1.69
RHBDD3-205ENST00000488106 AARSP49588 968 aaKnown RBP eCLIP25.61■■□□□ 1.69
RHBDD3-205ENST00000488106 ARPP19P56211 112 aa25.61■■□□□ 1.69
RHBDD3-205ENST00000488106 PSMD2Q13200 908 aa25.61■■□□□ 1.69
RHBDD3-205ENST00000488106 RAB33AQ14088 237 aa25.61■■□□□ 1.69
RHBDD3-205ENST00000488106 CTXN3Q4LDR2 81 aa25.61■■□□□ 1.69
RHBDD3-205ENST00000488106 LIN9Q5TKA1 542 aa25.61■■□□□ 1.69
RHBDD3-205ENST00000488106 ZNF280DQ6N043 979 aa25.61■■□□□ 1.69
RHBDD3-205ENST00000488106 NT5DC4Q86YG4 428 aa25.61■■□□□ 1.69
RHBDD3-205ENST00000488106 CMASQ8NFW8 434 aaPredicted RBP25.61■■□□□ 1.69
RHBDD3-205ENST00000488106 HDAC7Q8WUI4 952 aa25.61■■□□□ 1.69
RHBDD3-205ENST00000488106 ANO9A1A5B4 782 aa25.6■■□□□ 1.69
RHBDD3-205ENST00000488106 ZNF233A6NK53 670 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms