RNA–Protein interactions for RNA: ENST00000487942.1

SCAP-212, Transcript of SREBF chaperone, humanhuman

TSL 3

Gene SCAP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-212ENST00000487942 FNIP2Q9P278 1114 aa8.18□□□□□ -1.1
SCAP-212ENST00000487942 SORCS3Q9UPU3 1222 aa8.18□□□□□ -1.1
SCAP-212ENST00000487942 SSX2IPQ9Y2D8 614 aa8.18□□□□□ -1.1
SCAP-212ENST00000487942 TICRRQ7Z2Z1 1910 aa8.18□□□□□ -1.1
SCAP-212ENST00000487942 SF3B1O75533 1304 aaKnown RBP eCLIP8.18□□□□□ -1.1
SCAP-212ENST00000487942 FANCMQ8IYD8 2048 aa8.18□□□□□ -1.1
SCAP-212ENST00000487942 VPS37CA5D8V6 355 aaPredicted RBP8.17□□□□□ -1.1
SCAP-212ENST00000487942 CFAP99D6REC4 459 aa8.17□□□□□ -1.1
SCAP-212ENST00000487942 SPTLC1O15269 473 aa8.17□□□□□ -1.1
SCAP-212ENST00000487942 B3GAT3O94766 335 aa8.17□□□□□ -1.1
SCAP-212ENST00000487942 MAPTP10636 758 aaKnown RBP8.17□□□□□ -1.1
SCAP-212ENST00000487942 PLS3P13797 630 aa8.17□□□□□ -1.1
SCAP-212ENST00000487942 PLCG1P19174 1290 aa8.17□□□□□ -1.1
SCAP-212ENST00000487942 TKTP29401 623 aaKnown RBP8.17□□□□□ -1.1
SCAP-212ENST00000487942 NTHL1P78549 312 aa8.17□□□□□ -1.1
SCAP-212ENST00000487942 NHLH1Q02575 133 aa8.17□□□□□ -1.1
SCAP-212ENST00000487942 SPAG1Q07617 926 aa8.17□□□□□ -1.1
SCAP-212ENST00000487942 KCNH2Q12809 1159 aa8.17□□□□□ -1.1
SCAP-212ENST00000487942 MTMR3Q13615 1198 aa8.17□□□□□ -1.1
SCAP-212ENST00000487942 MCM6Q14566 821 aa8.17□□□□□ -1.1
SCAP-212ENST00000487942 KARSQ15046 597 aaKnown RBP8.17□□□□□ -1.1
SCAP-212ENST00000487942 SF3A1Q15459 793 aaKnown RBP8.17□□□□□ -1.1
SCAP-212ENST00000487942 PSMD5Q16401 504 aa8.17□□□□□ -1.1
SCAP-212ENST00000487942 UPP1Q16831 310 aa8.17□□□□□ -1.1
SCAP-212ENST00000487942 LINC01559Q495D7 138 aa8.17□□□□□ -1.1
SCAP-212ENST00000487942 XKR4Q5GH76 650 aa8.17□□□□□ -1.1
SCAP-212ENST00000487942 SPECC1Q5M775 1068 aa8.17□□□□□ -1.1
SCAP-212ENST00000487942 MPZL3Q6UWV2 235 aa8.17□□□□□ -1.1
SCAP-212ENST00000487942 C15orf39Q6ZRI6 1047 aa8.17□□□□□ -1.1
SCAP-212ENST00000487942 CCDC149Q6ZUS6 474 aa8.17□□□□□ -1.1
SCAP-212ENST00000487942 CMASQ8NFW8 434 aaPredicted RBP8.17□□□□□ -1.1
SCAP-212ENST00000487942 PIK3R5Q8WYR1 880 aa8.17□□□□□ -1.1
SCAP-212ENST00000487942 SNX27Q96L92 541 aa8.17□□□□□ -1.1
SCAP-212ENST00000487942 MYADMQ96S97 322 aa8.17□□□□□ -1.1
SCAP-212ENST00000487942 REEP2Q9BRK0 252 aa8.17□□□□□ -1.1
SCAP-212ENST00000487942 NTPCRQ9BSD7 190 aaKnown RBP8.17□□□□□ -1.1
SCAP-212ENST00000487942 TCHPQ9BT92 498 aa8.17□□□□□ -1.1
SCAP-212ENST00000487942 WDR6Q9NNW5 1121 aaKnown RBP8.17□□□□□ -1.1
SCAP-212ENST00000487942 ANKFY1Q9P2R3 1169 aa8.17□□□□□ -1.1
SCAP-212ENST00000487942 FBXW11Q9UKB1 542 aa8.17□□□□□ -1.1
SCAP-212ENST00000487942 USTQ9Y2C2 406 aa8.17□□□□□ -1.1
SCAP-212ENST00000487942 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.17□□□□□ -1.1
SCAP-212ENST00000487942 CLIC4Q9Y696 253 aa8.17□□□□□ -1.1
SCAP-212ENST00000487942 CLUHO75153 1309 aa8.17□□□□□ -1.1
SCAP-212ENST00000487942 PATJQ8NI35 1801 aa8.17□□□□□ -1.1
SCAP-212ENST00000487942 CACNA1IQ9P0X4 2223 aa8.17□□□□□ -1.1
SCAP-212ENST00000487942 TMEM189-UBE2V1I3L0A0 370 aa8.16□□□□□ -1.1
SCAP-212ENST00000487942 SIAH2O43255 324 aa8.16□□□□□ -1.1
SCAP-212ENST00000487942 NARSO43776 548 aaKnown RBP8.16□□□□□ -1.1
SCAP-212ENST00000487942 PAPLNO95428 1278 aa8.16□□□□□ -1.1
SCAP-212ENST00000487942 MCF2P10911 925 aa8.16□□□□□ -1.1
SCAP-212ENST00000487942 FGFR3P22607 806 aa8.16□□□□□ -1.1
SCAP-212ENST00000487942 AVPR2P30518 371 aa8.16□□□□□ -1.1
SCAP-212ENST00000487942 GBP2P32456 591 aaPredicted RBP8.16□□□□□ -1.1
SCAP-212ENST00000487942 OR1D2P34982 312 aa8.16□□□□□ -1.1
SCAP-212ENST00000487942 TNFSF9P41273 254 aa8.16□□□□□ -1.1
SCAP-212ENST00000487942 TCF15Q12870 199 aa8.16□□□□□ -1.1
SCAP-212ENST00000487942 RESTQ13127 1097 aa8.16□□□□□ -1.1
SCAP-212ENST00000487942 PTPAQ15257 358 aa8.16□□□□□ -1.1
SCAP-212ENST00000487942 SLC10A6Q3KNW5 377 aa8.16□□□□□ -1.1
SCAP-212ENST00000487942 ZBTB41Q5SVQ8 909 aa8.16□□□□□ -1.1
SCAP-212ENST00000487942 DCLRE1AQ6PJP8 1040 aa8.16□□□□□ -1.1
SCAP-212ENST00000487942 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.16□□□□□ -1.1
SCAP-212ENST00000487942 OTOP3Q7RTS5 596 aa8.16□□□□□ -1.1
SCAP-212ENST00000487942 HAUS6Q7Z4H7 955 aa8.16□□□□□ -1.1
SCAP-212ENST00000487942 ALYREFQ86V81 257 aaKnown RBP8.16□□□□□ -1.1
SCAP-212ENST00000487942 GPBP1Q86WP2 473 aa8.16□□□□□ -1.1
SCAP-212ENST00000487942 SUGP1Q8IWZ8 645 aaKnown RBP8.16□□□□□ -1.1
SCAP-212ENST00000487942 EHBP1Q8NDI1 1231 aa8.16□□□□□ -1.1
SCAP-212ENST00000487942 BAP1Q92560 729 aa8.16□□□□□ -1.1
SCAP-212ENST00000487942 EPSTI1Q96J88 318 aa8.16□□□□□ -1.1
SCAP-212ENST00000487942 CDK5RAP3Q96JB5 506 aa8.16□□□□□ -1.1
SCAP-212ENST00000487942 CLIC6Q96NY7 704 aa8.16□□□□□ -1.1
SCAP-212ENST00000487942 ACAP3Q96P50 834 aa8.16□□□□□ -1.1
SCAP-212ENST00000487942 TIPINQ9BVW5 301 aa8.16□□□□□ -1.1
SCAP-212ENST00000487942 CCDC94Q9BW85 323 aaPredicted RBP8.16□□□□□ -1.1
SCAP-212ENST00000487942 IKZF4Q9H2S9 585 aa8.16□□□□□ -1.1
SCAP-212ENST00000487942 PLEKHA4Q9H4M7 779 aa8.16□□□□□ -1.1
SCAP-212ENST00000487942 C17orf75Q9HAS0 396 aa8.16□□□□□ -1.1
SCAP-212ENST00000487942 KCNK12Q9HB15 430 aa8.16□□□□□ -1.1
SCAP-212ENST00000487942 PIDD1Q9HB75 910 aa8.16□□□□□ -1.1
SCAP-212ENST00000487942 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.16□□□□□ -1.1
SCAP-212ENST00000487942 TUBGCP4Q9UGJ1 667 aa8.16□□□□□ -1.1
SCAP-212ENST00000487942 RBM19Q9Y4C8 960 aaKnown RBP8.16□□□□□ -1.1
SCAP-212ENST00000487942 CACNA1HO95180 2353 aa8.15□□□□□ -1.1
SCAP-212ENST00000487942 GREB1Q4ZG55 1949 aa8.15□□□□□ -1.1
SCAP-212ENST00000487942 NUP210Q8TEM1 1887 aaPredicted RBP8.15□□□□□ -1.1
SCAP-212ENST00000487942 TISP43B9A030 160 aa8.15□□□□□ -1.1
SCAP-212ENST00000487942 PODXLO00592 558 aa8.15□□□□□ -1.1
SCAP-212ENST00000487942 CCL16O15467 120 aa8.15□□□□□ -1.1
SCAP-212ENST00000487942 TOM1L1O75674 476 aa8.15□□□□□ -1.1
SCAP-212ENST00000487942 C8AP07357 584 aa8.15□□□□□ -1.1
SCAP-212ENST00000487942 CXCL8P10145 99 aa8.15□□□□□ -1.1
SCAP-212ENST00000487942 KCNE1P15382 129 aa8.15□□□□□ -1.1
SCAP-212ENST00000487942 SYT1P21579 422 aa8.15□□□□□ -1.1
SCAP-212ENST00000487942 MARCKSP29966 332 aaPredicted RBP8.15□□□□□ -1.1
SCAP-212ENST00000487942 NMT1P30419 496 aaKnown RBP8.15□□□□□ -1.1
SCAP-212ENST00000487942 UBA7P41226 1012 aa8.15□□□□□ -1.1
SCAP-212ENST00000487942 GUCY2FP51841 1108 aa8.15□□□□□ -1.1
SCAP-212ENST00000487942 YARSP54577 528 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms