RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 CR1LQ2VPA4 569 aa5.44□□□□□ -1.54
CNN3-206ENST00000487539 CCDC144BQ3MJ40 725 aa5.44□□□□□ -1.54
CNN3-206ENST00000487539 TRIM61Q5EBN2 209 aa5.44□□□□□ -1.54
CNN3-206ENST00000487539 FAM47CQ5HY64 1035 aa5.44□□□□□ -1.54
CNN3-206ENST00000487539 UBE3BQ7Z3V4 1068 aa5.44□□□□□ -1.54
CNN3-206ENST00000487539 LILRB2Q8N423 598 aa5.44□□□□□ -1.54
CNN3-206ENST00000487539 FAM26EQ8N5C1 309 aa5.44□□□□□ -1.54
CNN3-206ENST00000487539 ARNTL2Q8WYA1 636 aa5.44□□□□□ -1.54
CNN3-206ENST00000487539 ATOH1Q92858 354 aaPredicted RBP5.44□□□□□ -1.54
CNN3-206ENST00000487539 FBXW5Q969U6 566 aa5.44□□□□□ -1.54
CNN3-206ENST00000487539 NOX5Q96PH1 765 aa5.44□□□□□ -1.54
CNN3-206ENST00000487539 GORASP1Q9BQQ3 440 aa5.44□□□□□ -1.54
CNN3-206ENST00000487539 C11orf84Q9BUA3 381 aaPredicted RBP5.44□□□□□ -1.54
CNN3-206ENST00000487539 HSPBP1Q9NZL4 362 aa5.44□□□□□ -1.54
CNN3-206ENST00000487539 NDOR1Q9UHB4 597 aa5.44□□□□□ -1.54
CNN3-206ENST00000487539 SFMBT1Q9UHJ3 866 aa5.44□□□□□ -1.54
CNN3-206ENST00000487539 DSEQ9UL01 958 aa5.44□□□□□ -1.54
CNN3-206ENST00000487539 MAP3K2Q9Y2U5 619 aa5.44□□□□□ -1.54
CNN3-206ENST00000487539 LAS1LQ9Y4W2 734 aaKnown RBP5.44□□□□□ -1.54
CNN3-206ENST00000487539 PCDHA8Q9Y5H6 950 aa5.44□□□□□ -1.54
CNN3-206ENST00000487539 LOC285556D6RIA3 1793 aa5.44□□□□□ -1.54
CNN3-206ENST00000487539 GAKO14976 1311 aa5.44□□□□□ -1.54
CNN3-206ENST00000487539 UMODL1Q5DID0 1318 aa5.44□□□□□ -1.54
CNN3-206ENST00000487539 DOCK1Q14185 1865 aa5.43□□□□□ -1.54
CNN3-206ENST00000487539 H0Y858 1186 aa5.43□□□□□ -1.54
CNN3-206ENST00000487539 ELL2O00472 640 aaPredicted RBP5.43□□□□□ -1.54
CNN3-206ENST00000487539 CHL1O00533 1208 aa5.43□□□□□ -1.54
CNN3-206ENST00000487539 SLC27A2O14975 620 aa5.43□□□□□ -1.54
CNN3-206ENST00000487539 CTNND1O60716 968 aaKnown RBP5.43□□□□□ -1.54
CNN3-206ENST00000487539 CRTAMO95727 393 aa5.43□□□□□ -1.54
CNN3-206ENST00000487539 PLATP00750 562 aa5.43□□□□□ -1.54
CNN3-206ENST00000487539 CA3P07451 260 aa5.43□□□□□ -1.54
CNN3-206ENST00000487539 COL6A2P12110 1019 aa5.43□□□□□ -1.54
CNN3-206ENST00000487539 KCNA5P22460 613 aa5.43□□□□□ -1.54
CNN3-206ENST00000487539 MAPK4P31152 587 aa5.43□□□□□ -1.54
CNN3-206ENST00000487539 PPIGQ13427 754 aaKnown RBP eCLIP5.43□□□□□ -1.54
CNN3-206ENST00000487539 LEXMQ3ZCV2 418 aa5.43□□□□□ -1.54
CNN3-206ENST00000487539 TEPPQ6URK8 271 aa5.43□□□□□ -1.54
CNN3-206ENST00000487539 NLGN4XQ8N0W4 816 aa5.43□□□□□ -1.54
CNN3-206ENST00000487539 CARFQ8N187 725 aa5.43□□□□□ -1.54
CNN3-206ENST00000487539 GSTCDQ8NEC7 633 aa5.43□□□□□ -1.54
CNN3-206ENST00000487539 RMDN1Q96DB5 314 aa5.43□□□□□ -1.54
CNN3-206ENST00000487539 MAGEB10Q96LZ2 347 aaPredicted RBP5.43□□□□□ -1.54
CNN3-206ENST00000487539 TMEM209Q96SK2 561 aa5.43□□□□□ -1.54
CNN3-206ENST00000487539 PUS3Q9BZE2 481 aaKnown RBP5.43□□□□□ -1.54
CNN3-206ENST00000487539 UBE2ZQ9H832 354 aaPredicted RBP5.43□□□□□ -1.54
CNN3-206ENST00000487539 DDX4Q9NQI0 724 aaKnown RBP5.43□□□□□ -1.54
CNN3-206ENST00000487539 TLR9Q9NR96 1032 aa5.43□□□□□ -1.54
CNN3-206ENST00000487539 CATSPERZQ9NTU4 200 aa5.43□□□□□ -1.54
CNN3-206ENST00000487539 MUTYHQ9UIF7 546 aa5.43□□□□□ -1.54
CNN3-206ENST00000487539 LRRFIP2Q9Y608 721 aaKnown RBP5.43□□□□□ -1.54
CNN3-206ENST00000487539 KMT2EQ8IZD2 1858 aa5.43□□□□□ -1.54
CNN3-206ENST00000487539 EP300Q09472 2414 aaPredicted RBP5.43□□□□□ -1.54
CNN3-206ENST00000487539 GPR179Q6PRD1 2367 aa5.42□□□□□ -1.54
CNN3-206ENST00000487539 PRR23AA6NEV1 266 aa5.42□□□□□ -1.54
CNN3-206ENST00000487539 H3BQ06 376 aaPredicted RBP5.42□□□□□ -1.54
CNN3-206ENST00000487539 NKRFO15226 690 aaKnown RBP eCLIP5.42□□□□□ -1.54
CNN3-206ENST00000487539 CYP7B1O75881 506 aa5.42□□□□□ -1.54
CNN3-206ENST00000487539 FGBP02675 491 aa5.42□□□□□ -1.54
CNN3-206ENST00000487539 SLC5A1P13866 664 aa5.42□□□□□ -1.54
CNN3-206ENST00000487539 PPP2R1AP30153 589 aa5.42□□□□□ -1.54
CNN3-206ENST00000487539 THBS2P35442 1172 aa5.42□□□□□ -1.54
CNN3-206ENST00000487539 SARSP49591 514 aaKnown RBP5.42□□□□□ -1.54
CNN3-206ENST00000487539 RGS3P49796 1198 aa5.42□□□□□ -1.54
CNN3-206ENST00000487539 EPHA5P54756 1037 aa5.42□□□□□ -1.54
CNN3-206ENST00000487539 ITGA1P56199 1179 aa5.42□□□□□ -1.54
CNN3-206ENST00000487539 RIPK4P57078 832 aa5.42□□□□□ -1.54
CNN3-206ENST00000487539 TAP1Q03518 808 aa5.42□□□□□ -1.54
CNN3-206ENST00000487539 TUSC3Q13454 348 aa5.42□□□□□ -1.54
CNN3-206ENST00000487539 GPR19Q15760 415 aa5.42□□□□□ -1.54
CNN3-206ENST00000487539 CRY1Q16526 586 aa5.42□□□□□ -1.54
CNN3-206ENST00000487539 EPHA10Q5JZY3 1008 aa5.42□□□□□ -1.54
CNN3-206ENST00000487539 WDR78Q5VTH9 848 aa5.42□□□□□ -1.54
CNN3-206ENST00000487539 EP400NLQ6ZTU2 488 aa5.42□□□□□ -1.54
CNN3-206ENST00000487539 KCTD1Q719H9 257 aa5.42□□□□□ -1.54
CNN3-206ENST00000487539 ANKRD33Q7Z3H0 272 aa5.42□□□□□ -1.54
CNN3-206ENST00000487539 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.42□□□□□ -1.54
CNN3-206ENST00000487539 ZC3H7AQ8IWR0 971 aaKnown RBP5.42□□□□□ -1.54
CNN3-206ENST00000487539 PCDH19Q8TAB3 1148 aa5.42□□□□□ -1.54
CNN3-206ENST00000487539 CFAP53Q96M91 514 aa5.42□□□□□ -1.54
CNN3-206ENST00000487539 CLIC6Q96NY7 704 aa5.42□□□□□ -1.54
CNN3-206ENST00000487539 IL23AQ9NPF7 189 aa5.42□□□□□ -1.54
CNN3-206ENST00000487539 PCDHA9Q9Y5H5 950 aa5.42□□□□□ -1.54
CNN3-206ENST00000487539 ZNF521Q96K83 1311 aa5.42□□□□□ -1.54
CNN3-206ENST00000487539 SETXQ7Z333 2677 aaKnown RBP5.41□□□□□ -1.54
CNN3-206ENST00000487539 USP24Q9UPU5 2620 aa5.41□□□□□ -1.54
CNN3-206ENST00000487539 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.41□□□□□ -1.54
CNN3-206ENST00000487539 ANKRD18BA2A2Z9 1011 aa5.41□□□□□ -1.54
CNN3-206ENST00000487539 PI4KAP2A4QPH2 592 aa5.41□□□□□ -1.54
CNN3-206ENST00000487539 MYADML2A6NDP7 307 aa5.41□□□□□ -1.54
CNN3-206ENST00000487539 SLC15A5A6NIM6 579 aa5.41□□□□□ -1.54
CNN3-206ENST00000487539 PLD2O14939 933 aa5.41□□□□□ -1.54
CNN3-206ENST00000487539 SEPT4O43236 478 aa5.41□□□□□ -1.54
CNN3-206ENST00000487539 LRG1P02750 347 aa5.41□□□□□ -1.54
CNN3-206ENST00000487539 HOXC6P09630 235 aa5.41□□□□□ -1.54
CNN3-206ENST00000487539 RPL13P26373 211 aaKnown RBP5.41□□□□□ -1.54
CNN3-206ENST00000487539 HOXA7P31268 230 aaPredicted RBP5.41□□□□□ -1.54
CNN3-206ENST00000487539 CCL23P55773 120 aa5.41□□□□□ -1.54
CNN3-206ENST00000487539 IRX3P78415 501 aaPredicted RBP5.41□□□□□ -1.54
CNN3-206ENST00000487539 DLX2Q07687 328 aaPredicted RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms