RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 IFT88Q13099 833 aa27.83■■■□□ 2.04
HLA-C-208ENST00000487245 QPCTQ16769 361 aa27.83■■■□□ 2.04
HLA-C-208ENST00000487245 MFSD5Q6N075 450 aa27.83■■■□□ 2.04
HLA-C-208ENST00000487245 EXOC8Q8IYI6 725 aa27.83■■■□□ 2.04
HLA-C-208ENST00000487245 PCYT2Q99447 389 aa27.83■■■□□ 2.04
HLA-C-208ENST00000487245 CCDC134Q9H6E4 229 aa27.83■■■□□ 2.04
HLA-C-208ENST00000487245 SOWAHBA6NEL2 793 aa27.82■■■□□ 2.04
HLA-C-208ENST00000487245 CYP1A1P04798 512 aaPredicted RBP27.82■■■□□ 2.04
HLA-C-208ENST00000487245 EFNA5P52803 228 aa27.82■■■□□ 2.04
HLA-C-208ENST00000487245 CUL2Q13617 745 aa27.82■■■□□ 2.04
HLA-C-208ENST00000487245 ZPBP2Q6X784 338 aa27.82■■■□□ 2.04
HLA-C-208ENST00000487245 CACNA2D3Q8IZS8 1091 aa27.82■■■□□ 2.04
HLA-C-208ENST00000487245 CHMP6Q96FZ7 201 aa27.82■■■□□ 2.04
HLA-C-208ENST00000487245 TARS2Q9BW92 718 aaKnown RBP27.82■■■□□ 2.04
HLA-C-208ENST00000487245 ADAM7Q9H2U9 754 aa27.82■■■□□ 2.04
HLA-C-208ENST00000487245 MAFO75444 373 aaPredicted RBP27.81■■■□□ 2.04
HLA-C-208ENST00000487245 VNN1O95497 513 aa27.81■■■□□ 2.04
HLA-C-208ENST00000487245 SMYD5Q6GMV2 418 aa27.81■■■□□ 2.04
HLA-C-208ENST00000487245 ZBTB45Q96K62 511 aaPredicted RBP27.81■■■□□ 2.04
HLA-C-208ENST00000487245 HAPLN2Q9GZV7 340 aa27.81■■■□□ 2.04
HLA-C-208ENST00000487245 AZI2Q9H6S1 392 aa27.81■■■□□ 2.04
HLA-C-208ENST00000487245 ANAPC7Q9UJX3 599 aa27.81■■■□□ 2.04
HLA-C-208ENST00000487245 ADGRA2Q96PE1 1338 aa27.81■■■□□ 2.04
HLA-C-208ENST00000487245 DICER1Q9UPY3 1922 aaKnown RBP27.81■■■□□ 2.04
HLA-C-208ENST00000487245 NSFP46459 744 aaKnown RBP27.81■■■□□ 2.04
HLA-C-208ENST00000487245 CENPCQ03188 943 aa27.81■■■□□ 2.04
HLA-C-208ENST00000487245 GRM1Q13255 1194 aa27.81■■■□□ 2.04
HLA-C-208ENST00000487245 LIN9Q5TKA1 542 aa27.81■■■□□ 2.04
HLA-C-208ENST00000487245 GKAP1Q5VSY0 366 aaPredicted RBP27.81■■■□□ 2.04
HLA-C-208ENST00000487245 LMBRD2Q68DH5 695 aaPredicted RBP27.81■■■□□ 2.04
HLA-C-208ENST00000487245 KCNV1Q6PIU1 500 aa27.81■■■□□ 2.04
HLA-C-208ENST00000487245 METTL7BQ6UX53 244 aa27.81■■■□□ 2.04
HLA-C-208ENST00000487245 CCDC121Q6ZUS5 278 aa27.81■■■□□ 2.04
HLA-C-208ENST00000487245 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.81■■■□□ 2.04
HLA-C-208ENST00000487245 ATXN2LQ8WWM7 1075 aaKnown RBP27.81■■■□□ 2.04
HLA-C-208ENST00000487245 VCPIP1Q96JH7 1222 aa27.81■■■□□ 2.04
HLA-C-208ENST00000487245 CNTN6Q9UQ52 1028 aa27.81■■■□□ 2.04
HLA-C-208ENST00000487245 PTPRFP10586 1907 aa27.8■■■□□ 2.04
HLA-C-208ENST00000487245 GAS2O43903 313 aaKnown RBP27.8■■■□□ 2.04
HLA-C-208ENST00000487245 ACO1P21399 889 aaKnown RBP27.8■■■□□ 2.04
HLA-C-208ENST00000487245 CALCOCO2Q13137 446 aa27.8■■■□□ 2.04
HLA-C-208ENST00000487245 RNF187Q5TA31 235 aaPredicted RBP27.8■■■□□ 2.04
HLA-C-208ENST00000487245 RHBDF2Q6PJF5 856 aa27.8■■■□□ 2.04
HLA-C-208ENST00000487245 NCAPG2Q86XI2 1143 aa27.8■■■□□ 2.04
HLA-C-208ENST00000487245 ZNF317Q96PQ6 595 aaPredicted RBP27.8■■■□□ 2.04
HLA-C-208ENST00000487245 SLC25A27O95847 323 aa27.79■■■□□ 2.04
HLA-C-208ENST00000487245 CHN1P15882 459 aa27.79■■■□□ 2.04
HLA-C-208ENST00000487245 ITIH2P19823 946 aa27.79■■■□□ 2.04
HLA-C-208ENST00000487245 LACTB2Q53H82 288 aaPredicted RBP27.79■■■□□ 2.04
HLA-C-208ENST00000487245 SGO2Q562F6 1265 aa27.79■■■□□ 2.04
HLA-C-208ENST00000487245 IER5Q5VY09 327 aa27.79■■■□□ 2.04
HLA-C-208ENST00000487245 GADL1Q6ZQY3 521 aa27.79■■■□□ 2.04
HLA-C-208ENST00000487245 TCP11Q8WWU5 503 aa27.79■■■□□ 2.04
HLA-C-208ENST00000487245 SBDSQ9Y3A5 250 aaKnown RBP eCLIP27.79■■■□□ 2.04
HLA-C-208ENST00000487245 PCDHB4Q9Y5E5 795 aa27.79■■■□□ 2.04
HLA-C-208ENST00000487245 MROH7Q68CQ1 1323 aa27.79■■■□□ 2.04
HLA-C-208ENST00000487245 CNTNAP2Q9UHC6 1331 aa27.79■■■□□ 2.04
HLA-C-208ENST00000487245 CLDN3O15551 220 aa27.78■■■□□ 2.04
HLA-C-208ENST00000487245 CLTAP09496 248 aa27.78■■■□□ 2.04
HLA-C-208ENST00000487245 IRX3P78415 501 aaPredicted RBP27.78■■■□□ 2.04
HLA-C-208ENST00000487245 PTK6Q13882 451 aa27.78■■■□□ 2.04
HLA-C-208ENST00000487245 CAPSQ13938 189 aa27.78■■■□□ 2.04
HLA-C-208ENST00000487245 PPP1R7Q15435 360 aa27.78■■■□□ 2.04
HLA-C-208ENST00000487245 ICE2Q659A1 982 aa27.78■■■□□ 2.04
HLA-C-208ENST00000487245 TAX1BP1Q86VP1 789 aa27.78■■■□□ 2.04
HLA-C-208ENST00000487245 MDM1Q8TC05 714 aa27.78■■■□□ 2.04
HLA-C-208ENST00000487245 ELMO3Q96BJ8 720 aa27.78■■■□□ 2.04
HLA-C-208ENST00000487245 CABS1Q96KC9 395 aa27.78■■■□□ 2.04
HLA-C-208ENST00000487245 ANKFY1Q9P2R3 1169 aa27.78■■■□□ 2.04
HLA-C-208ENST00000487245 POLR2AP24928 1970 aaKnown RBP27.78■■■□□ 2.04
HLA-C-208ENST00000487245 HNRNPH1P31943 449 aaKnown RBP27.78■■■□□ 2.04
HLA-C-208ENST00000487245 KCNJ1P48048 391 aa27.78■■■□□ 2.04
HLA-C-208ENST00000487245 IREB2P48200 963 aaKnown RBP27.78■■■□□ 2.04
HLA-C-208ENST00000487245 WNT7BP56706 349 aa27.78■■■□□ 2.04
HLA-C-208ENST00000487245 CAV1Q03135 178 aa27.78■■■□□ 2.04
HLA-C-208ENST00000487245 R3HDM1Q15032 1099 aaKnown RBP27.78■■■□□ 2.04
HLA-C-208ENST00000487245 ABRAQ8N0Z2 381 aa27.78■■■□□ 2.04
HLA-C-208ENST00000487245 GRK7Q8WTQ7 553 aa27.78■■■□□ 2.04
HLA-C-208ENST00000487245 DCPSQ96C86 337 aaKnown RBP27.78■■■□□ 2.04
HLA-C-208ENST00000487245 RASGRF2O14827 1237 aa27.77■■■□□ 2.04
HLA-C-208ENST00000487245 IRF6O14896 467 aa27.77■■■□□ 2.04
HLA-C-208ENST00000487245 TP73O15350 636 aa27.77■■■□□ 2.04
HLA-C-208ENST00000487245 TCF7P36402 384 aaPredicted RBP27.77■■■□□ 2.04
HLA-C-208ENST00000487245 KRT17Q04695 432 aa27.77■■■□□ 2.04
HLA-C-208ENST00000487245 AUHQ13825 339 aaKnown RBP27.77■■■□□ 2.04
HLA-C-208ENST00000487245 CPLX4Q7Z7G2 160 aa27.77■■■□□ 2.04
HLA-C-208ENST00000487245 CPA5Q8WXQ8 436 aa27.77■■■□□ 2.04
HLA-C-208ENST00000487245 BBXQ8WY36 941 aaPredicted RBP27.77■■■□□ 2.04
HLA-C-208ENST00000487245 MRPL4Q9BYD3 311 aaKnown RBP27.77■■■□□ 2.04
HLA-C-208ENST00000487245 APOBEC3GQ9HC16 384 aaKnown RBP27.77■■■□□ 2.04
HLA-C-208ENST00000487245 MRPL47Q9HD33 250 aaKnown RBP27.77■■■□□ 2.04
HLA-C-208ENST00000487245 ADARB2Q9NS39 739 aaKnown RBP27.77■■■□□ 2.04
HLA-C-208ENST00000487245 PTPN22Q9Y2R2 807 aa27.77■■■□□ 2.04
HLA-C-208ENST00000487245 PTPRJQ12913 1337 aa27.77■■■□□ 2.04
HLA-C-208ENST00000487245 A0A0G2JLL6 359 aaPredicted RBP27.76■■■□□ 2.04
HLA-C-208ENST00000487245 TLDC2A0PJX2 215 aa27.76■■■□□ 2.04
HLA-C-208ENST00000487245 CXCL11O14625 94 aa27.76■■■□□ 2.04
HLA-C-208ENST00000487245 ASAP2O43150 1006 aa27.76■■■□□ 2.04
HLA-C-208ENST00000487245 FGFR4P22455 802 aa27.76■■■□□ 2.04
HLA-C-208ENST00000487245 SURF1Q15526 300 aa27.76■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms