RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 SYN3O14994 580 aa24.29■■□□□ 1.48
CDHR3-212ENST00000487084 EIF3DO15371 548 aaKnown RBP eCLIP24.29■■□□□ 1.48
CDHR3-212ENST00000487084 NDUFA8P51970 172 aa24.29■■□□□ 1.48
CDHR3-212ENST00000487084 VARS2Q5ST30 1063 aaKnown RBP24.29■■□□□ 1.48
CDHR3-212ENST00000487084 SPATA1Q5VX52 437 aa24.29■■□□□ 1.48
CDHR3-212ENST00000487084 LILRA6Q6PI73 481 aa24.29■■□□□ 1.48
CDHR3-212ENST00000487084 CRELD2Q6UXH1 353 aaPredicted RBP24.29■■□□□ 1.48
CDHR3-212ENST00000487084 RNF135Q8IUD6 432 aa24.29■■□□□ 1.48
CDHR3-212ENST00000487084 FSIP1Q8NA03 581 aa24.29■■□□□ 1.48
CDHR3-212ENST00000487084 PAGE5Q96GU1 130 aa24.29■■□□□ 1.48
CDHR3-212ENST00000487084 SUSD3Q96L08 255 aa24.29■■□□□ 1.48
CDHR3-212ENST00000487084 ASB7Q9H672 318 aa24.29■■□□□ 1.48
CDHR3-212ENST00000487084 USP25Q9UHP3 1055 aa24.29■■□□□ 1.48
CDHR3-212ENST00000487084 HPSEQ9Y251 543 aa24.29■■□□□ 1.48
CDHR3-212ENST00000487084 DERAQ9Y315 318 aa24.29■■□□□ 1.48
CDHR3-212ENST00000487084 NR2E1Q9Y466 385 aa24.29■■□□□ 1.48
CDHR3-212ENST00000487084 LDHAP00338 332 aaKnown RBP24.28■■□□□ 1.48
CDHR3-212ENST00000487084 LIN9Q5TKA1 542 aa24.28■■□□□ 1.48
CDHR3-212ENST00000487084 NELFCDQ8IXH7 590 aa24.28■■□□□ 1.48
CDHR3-212ENST00000487084 HDAC7Q8WUI4 952 aa24.28■■□□□ 1.48
CDHR3-212ENST00000487084 SLC39A2Q9NP94 309 aa24.28■■□□□ 1.48
CDHR3-212ENST00000487084 MUTYHQ9UIF7 546 aa24.28■■□□□ 1.48
CDHR3-212ENST00000487084 FBXW11Q9UKB1 542 aa24.28■■□□□ 1.48
CDHR3-212ENST00000487084 BACE2Q9Y5Z0 518 aa24.28■■□□□ 1.48
CDHR3-212ENST00000487084 PVALEFA0A1B0GWK0 134 aa24.27■■□□□ 1.48
CDHR3-212ENST00000487084 PPEF2O14830 753 aa24.27■■□□□ 1.48
CDHR3-212ENST00000487084 IL18RAPO95256 599 aa24.27■■□□□ 1.48
CDHR3-212ENST00000487084 C1RP00736 705 aa24.27■■□□□ 1.48
CDHR3-212ENST00000487084 RSPO2Q6UXX9 243 aaPredicted RBP24.27■■□□□ 1.48
CDHR3-212ENST00000487084 DSTYKQ6XUX3 929 aa24.27■■□□□ 1.48
CDHR3-212ENST00000487084 C15orf39Q6ZRI6 1047 aa24.27■■□□□ 1.48
CDHR3-212ENST00000487084 APPL2Q8NEU8 664 aa24.27■■□□□ 1.48
CDHR3-212ENST00000487084 CMASQ8NFW8 434 aaPredicted RBP24.27■■□□□ 1.48
CDHR3-212ENST00000487084 SMG7Q92540 1137 aaKnown RBP24.27■■□□□ 1.48
CDHR3-212ENST00000487084 PIDD1Q9HB75 910 aa24.27■■□□□ 1.48
CDHR3-212ENST00000487084 EXOC1Q9NV70 894 aa24.27■■□□□ 1.48
CDHR3-212ENST00000487084 RBAKQ9NYW8 714 aaPredicted RBP24.27■■□□□ 1.48
CDHR3-212ENST00000487084 C2CD2Q9Y426 696 aa24.27■■□□□ 1.48
CDHR3-212ENST00000487084 A0A1W2PQ27 194 aa24.26■■□□□ 1.47
CDHR3-212ENST00000487084 A0A1W2PQ64 194 aa24.26■■□□□ 1.47
CDHR3-212ENST00000487084 A0A1W2PQD8 194 aa24.26■■□□□ 1.47
CDHR3-212ENST00000487084 PI4K2BG5E9Z4 385 aa24.26■■□□□ 1.47
CDHR3-212ENST00000487084 H7C4K7 107 aa24.26■■□□□ 1.47
CDHR3-212ENST00000487084 DCXO43602 365 aa24.26■■□□□ 1.47
CDHR3-212ENST00000487084 EXTL3O43909 919 aa24.26■■□□□ 1.47
CDHR3-212ENST00000487084 ARPP19P56211 112 aa24.26■■□□□ 1.47
CDHR3-212ENST00000487084 POU5F1Q01860 360 aaKnown RBP24.26■■□□□ 1.47
CDHR3-212ENST00000487084 EHHADHQ08426 723 aa24.26■■□□□ 1.47
CDHR3-212ENST00000487084 RAB33AQ14088 237 aa24.26■■□□□ 1.47
CDHR3-212ENST00000487084 C9orf57Q5W0N0 161 aa24.26■■□□□ 1.47
CDHR3-212ENST00000487084 CCDC149Q6ZUS6 474 aa24.26■■□□□ 1.47
CDHR3-212ENST00000487084 EPM2AIP1Q7L775 607 aaPredicted RBP24.26■■□□□ 1.47
CDHR3-212ENST00000487084 BRSK2Q8IWQ3 736 aa24.26■■□□□ 1.47
CDHR3-212ENST00000487084 EFCAB13Q8IY85 973 aa24.26■■□□□ 1.47
CDHR3-212ENST00000487084 ZNF507Q8TCN5 953 aa24.26■■□□□ 1.47
CDHR3-212ENST00000487084 GOLPH3LQ9H4A5 285 aa24.26■■□□□ 1.47
CDHR3-212ENST00000487084 ZDHHC7Q9NXF8 308 aa24.26■■□□□ 1.47
CDHR3-212ENST00000487084 PCDHB8Q9UN66 801 aa24.26■■□□□ 1.47
CDHR3-212ENST00000487084 C2CD4DB7Z1M9 353 aa24.25■■□□□ 1.47
CDHR3-212ENST00000487084 ALADP13716 330 aa24.25■■□□□ 1.47
CDHR3-212ENST00000487084 HOXD13P35453 343 aa24.25■■□□□ 1.47
CDHR3-212ENST00000487084 TFAMQ00059 246 aaKnown RBP24.25■■□□□ 1.47
CDHR3-212ENST00000487084 CTXN3Q4LDR2 81 aa24.25■■□□□ 1.47
CDHR3-212ENST00000487084 ZNF280DQ6N043 979 aa24.25■■□□□ 1.47
CDHR3-212ENST00000487084 GPD1LQ8N335 351 aa24.25■■□□□ 1.47
CDHR3-212ENST00000487084 TDRD5Q8NAT2 981 aaKnown RBP24.25■■□□□ 1.47
CDHR3-212ENST00000487084 SCFD1Q8WVM8 642 aa24.25■■□□□ 1.47
CDHR3-212ENST00000487084 C1QTNF1Q9BXJ1 281 aa24.25■■□□□ 1.47
CDHR3-212ENST00000487084 DPP3Q9NY33 737 aa24.25■■□□□ 1.47
CDHR3-212ENST00000487084 TIMM13Q9Y5L4 95 aaPredicted RBP24.25■■□□□ 1.47
CDHR3-212ENST00000487084 UBE4BO95155 1302 aa24.25■■□□□ 1.47
CDHR3-212ENST00000487084 TCHHQ07283 1943 aa24.24■■□□□ 1.47
CDHR3-212ENST00000487084 ZMYND10O75800 440 aa24.24■■□□□ 1.47
CDHR3-212ENST00000487084 C8AP07357 584 aa24.24■■□□□ 1.47
CDHR3-212ENST00000487084 WNT7BP56706 349 aa24.24■■□□□ 1.47
CDHR3-212ENST00000487084 PPM1LQ5SGD2 360 aa24.24■■□□□ 1.47
CDHR3-212ENST00000487084 SLC7A14Q8TBB6 771 aa24.24■■□□□ 1.47
CDHR3-212ENST00000487084 ZNF707Q96C28 371 aaPredicted RBP24.24■■□□□ 1.47
CDHR3-212ENST00000487084 HSPBP1Q9NZL4 362 aa24.24■■□□□ 1.47
CDHR3-212ENST00000487084 FBXL5Q9UKA1 691 aa24.24■■□□□ 1.47
CDHR3-212ENST00000487084 FAM237AA0A1B0GTK4 181 aa24.23■■□□□ 1.47
CDHR3-212ENST00000487084 GOLGA6L4A6NEF3 574 aa24.23■■□□□ 1.47
CDHR3-212ENST00000487084 FAM86C2PA6NEL3 165 aa24.23■■□□□ 1.47
CDHR3-212ENST00000487084 M0QZQ0 153 aa24.23■■□□□ 1.47
CDHR3-212ENST00000487084 KIAA0391O15091 583 aaKnown RBP24.23■■□□□ 1.47
CDHR3-212ENST00000487084 KLRC4O43908 158 aa24.23■■□□□ 1.47
CDHR3-212ENST00000487084 ROR1Q01973 937 aa24.23■■□□□ 1.47
CDHR3-212ENST00000487084 YWHAHQ04917 246 aaPredicted RBP24.23■■□□□ 1.47
CDHR3-212ENST00000487084 KMT5BQ4FZB7 885 aa24.23■■□□□ 1.47
CDHR3-212ENST00000487084 USP37Q86T82 979 aa24.23■■□□□ 1.47
CDHR3-212ENST00000487084 PRKD2Q9BZL6 878 aa24.23■■□□□ 1.47
CDHR3-212ENST00000487084 AGPAT3Q9NRZ7 376 aa24.23■■□□□ 1.47
CDHR3-212ENST00000487084 PIRO00625 290 aa24.22■■□□□ 1.47
CDHR3-212ENST00000487084 CLIC2O15247 247 aa24.22■■□□□ 1.47
CDHR3-212ENST00000487084 AARSP49588 968 aaKnown RBP eCLIP24.22■■□□□ 1.47
CDHR3-212ENST00000487084 CYP2J2P51589 502 aa24.22■■□□□ 1.47
CDHR3-212ENST00000487084 LILRA4P59901 499 aa24.22■■□□□ 1.47
CDHR3-212ENST00000487084 MRPL58Q14197 206 aaKnown RBP24.22■■□□□ 1.47
CDHR3-212ENST00000487084 SLC8B1Q6J4K2 584 aa24.22■■□□□ 1.47
CDHR3-212ENST00000487084 CYP26C1Q6V0L0 522 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms