RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 SLC18A1P54219 525 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 GCNT1Q02742 428 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 DNAJC3Q13217 504 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 LLGL2Q6P1M3 1020 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 SV2AQ7L0J3 742 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 LDHDQ86WU2 507 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 TDRPQ86YL5 185 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 RHOT1Q8IXI2 618 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 TMEM237Q96Q45 408 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 LRRC37BQ96QE4 947 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 CSRNP1Q96S65 589 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 OSBPL8Q9BZF1 889 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.95□□□□□ -0.34
COL3A1-206ENST00000487010 NKX1-2Q9UD57 310 aaPredicted RBP12.95□□□□□ -0.34
COL3A1-206ENST00000487010 ZBTB21Q9ULJ3 1066 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 UMODL1Q5DID0 1318 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 SCN9AQ15858 1988 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 CDC25CP30307 473 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 HSD17B4P51659 736 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 TAS2R40P59535 323 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 SPP2Q13103 211 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 BLMHQ13867 455 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 SPARCL1Q14515 664 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 P3H1Q32P28 736 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 FAM102BQ5T8I3 360 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 NIPA1Q7RTP0 329 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 ZNF677Q86XU0 584 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 MAP4K3Q8IVH8 894 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 KATNAL2Q8IYT4 538 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 TMEM161BQ8NDZ6 487 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 KCNV2Q8TDN2 545 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 INPP5DQ92835 1189 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 SPDL1Q96EA4 605 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 FBXL18Q96ME1 805 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 PI4K2AQ9BTU6 479 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 DEFB129Q9H1M3 183 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 TRABDQ9H4I3 376 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 RNPEPL1Q9HAU8 725 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 AGO4Q9HCK5 861 aaKnown RBP12.95□□□□□ -0.34
COL3A1-206ENST00000487010 SAYSD1Q9NPB0 183 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 HAO1Q9UJM8 370 aa12.95□□□□□ -0.34
COL3A1-206ENST00000487010 DCTN3O75935 186 aa12.94□□□□□ -0.34
COL3A1-206ENST00000487010 LUC7L3O95232 432 aaKnown RBP12.94□□□□□ -0.34
COL3A1-206ENST00000487010 CYP1A1P04798 512 aaPredicted RBP12.94□□□□□ -0.34
COL3A1-206ENST00000487010 TARSP26639 723 aaKnown RBP12.94□□□□□ -0.34
COL3A1-206ENST00000487010 NSFP46459 744 aaKnown RBP12.94□□□□□ -0.34
COL3A1-206ENST00000487010 LMNB2Q03252 620 aa12.94□□□□□ -0.34
COL3A1-206ENST00000487010 CYP24A1Q07973 514 aa12.94□□□□□ -0.34
COL3A1-206ENST00000487010 TAF11Q15544 211 aa12.94□□□□□ -0.34
COL3A1-206ENST00000487010 PDK4Q16654 411 aa12.94□□□□□ -0.34
COL3A1-206ENST00000487010 C2CD6Q53TS8 623 aa12.94□□□□□ -0.34
COL3A1-206ENST00000487010 MIS18BP1Q6P0N0 1132 aa12.94□□□□□ -0.34
COL3A1-206ENST00000487010 MON1BQ7L1V2 547 aa12.94□□□□□ -0.34
COL3A1-206ENST00000487010 GSTA5Q7RTV2 222 aa12.94□□□□□ -0.34
COL3A1-206ENST00000487010 ANKS1BQ7Z6G8 1248 aa12.94□□□□□ -0.34
COL3A1-206ENST00000487010 OGFOD1Q8N543 542 aa12.94□□□□□ -0.34
COL3A1-206ENST00000487010 SPOCK2Q92563 424 aa12.94□□□□□ -0.34
COL3A1-206ENST00000487010 KIAA1586Q9HCI6 787 aa12.94□□□□□ -0.34
COL3A1-206ENST00000487010 GRID1Q9ULK0 1009 aa12.94□□□□□ -0.34
COL3A1-206ENST00000487010 CORO1CQ9ULV4 474 aaPredicted RBP12.94□□□□□ -0.34
COL3A1-206ENST00000487010 SMG5Q9UPR3 1016 aaKnown RBP12.94□□□□□ -0.34
COL3A1-206ENST00000487010 PCDHB2Q9Y5E7 798 aa12.94□□□□□ -0.34
COL3A1-206ENST00000487010 ZNF646O15015 1829 aaPredicted RBP12.94□□□□□ -0.34
COL3A1-206ENST00000487010 ASTN2O75129 1339 aaPredicted RBP12.94□□□□□ -0.34
COL3A1-206ENST00000487010 E7ENQ6 273 aa12.93□□□□□ -0.34
COL3A1-206ENST00000487010 PLA2G6O60733 806 aa12.93□□□□□ -0.34
COL3A1-206ENST00000487010 EDF1O60869 148 aaKnown RBP12.93□□□□□ -0.34
COL3A1-206ENST00000487010 ZC3H11AO75152 810 aaKnown RBP eCLIP12.93□□□□□ -0.34
COL3A1-206ENST00000487010 PEX11AO75192 247 aa12.93□□□□□ -0.34
COL3A1-206ENST00000487010 CALB2P22676 271 aa12.93□□□□□ -0.34
COL3A1-206ENST00000487010 ALDH3A1P30838 453 aa12.93□□□□□ -0.34
COL3A1-206ENST00000487010 PKN2Q16513 984 aaKnown RBP12.93□□□□□ -0.34
COL3A1-206ENST00000487010 UGCGQ16739 394 aa12.93□□□□□ -0.34
COL3A1-206ENST00000487010 TKFCQ3LXA3 575 aa12.93□□□□□ -0.34
COL3A1-206ENST00000487010 CAPRIN2Q6IMN6 1127 aaKnown RBP12.93□□□□□ -0.34
COL3A1-206ENST00000487010 SAMD1Q6SPF0 538 aaPredicted RBP12.93□□□□□ -0.34
COL3A1-206ENST00000487010 USP37Q86T82 979 aa12.93□□□□□ -0.34
COL3A1-206ENST00000487010 FAM160B2Q86V87 743 aa12.93□□□□□ -0.34
COL3A1-206ENST00000487010 C4orf19Q8IY42 314 aa12.93□□□□□ -0.34
COL3A1-206ENST00000487010 EXD1Q8NHP7 514 aa12.93□□□□□ -0.34
COL3A1-206ENST00000487010 IL31RAQ8NI17 732 aa12.93□□□□□ -0.34
COL3A1-206ENST00000487010 MICAL1Q8TDZ2 1067 aa12.93□□□□□ -0.34
COL3A1-206ENST00000487010 NAF1Q96HR8 494 aaKnown RBP12.93□□□□□ -0.34
COL3A1-206ENST00000487010 TTC25Q96NG3 672 aa12.93□□□□□ -0.34
COL3A1-206ENST00000487010 KIAA1683Q9H0B3 1180 aa12.93□□□□□ -0.34
COL3A1-206ENST00000487010 SLC24A3Q9HC58 644 aa12.93□□□□□ -0.34
COL3A1-206ENST00000487010 SLCO1B3Q9NPD5 702 aa12.93□□□□□ -0.34
COL3A1-206ENST00000487010 COL20A1Q9P218 1284 aa12.93□□□□□ -0.34
COL3A1-206ENST00000487010 HERC5Q9UII4 1024 aaKnown RBP12.93□□□□□ -0.34
COL3A1-206ENST00000487010 LRRC42Q9Y546 428 aa12.93□□□□□ -0.34
COL3A1-206ENST00000487010 COL2A1P02458 1487 aaPredicted RBP12.93□□□□□ -0.34
COL3A1-206ENST00000487010 POC1B-GALNT4F8VUJ3 575 aa12.93□□□□□ -0.34
COL3A1-206ENST00000487010 DNALI1O14645 258 aaPredicted RBP12.93□□□□□ -0.34
COL3A1-206ENST00000487010 ECE2O60344 883 aa12.93□□□□□ -0.34
COL3A1-206ENST00000487010 T-ENOLP0DO92 83 aa12.93□□□□□ -0.34
COL3A1-206ENST00000487010 CD58P19256 250 aa12.93□□□□□ -0.34
COL3A1-206ENST00000487010 ABL2P42684 1182 aa12.93□□□□□ -0.34
COL3A1-206ENST00000487010 NPTX2P47972 431 aa12.93□□□□□ -0.34
COL3A1-206ENST00000487010 GRIK3Q13003 919 aa12.93□□□□□ -0.34
COL3A1-206ENST00000487010 CCDC142Q17RM4 750 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms