RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 CLCNKBP51801 687 aa10.31□□□□□ -0.76
MCF2L-227ENST00000486806 MYL6P60660 151 aa10.31□□□□□ -0.76
MCF2L-227ENST00000486806 NOP14P78316 857 aaKnown RBP10.31□□□□□ -0.76
MCF2L-227ENST00000486806 RBP5P82980 135 aa10.31□□□□□ -0.76
MCF2L-227ENST00000486806 CETN1Q12798 172 aa10.31□□□□□ -0.76
MCF2L-227ENST00000486806 SHHQ15465 462 aa10.31□□□□□ -0.76
MCF2L-227ENST00000486806 PTPN21Q16825 1174 aa10.31□□□□□ -0.76
MCF2L-227ENST00000486806 PAN2Q504Q3 1202 aaKnown RBP10.31□□□□□ -0.76
MCF2L-227ENST00000486806 FAM117BQ6P1L5 589 aa10.31□□□□□ -0.76
MCF2L-227ENST00000486806 CD300LGQ6UXG3 332 aa10.31□□□□□ -0.76
MCF2L-227ENST00000486806 VSTM4Q8IW00 320 aa10.31□□□□□ -0.76
MCF2L-227ENST00000486806 EHBP1Q8NDI1 1231 aa10.31□□□□□ -0.76
MCF2L-227ENST00000486806 C3orf58Q8NDZ4 430 aa10.31□□□□□ -0.76
MCF2L-227ENST00000486806 TAF4BQ92750 862 aa10.31□□□□□ -0.76
MCF2L-227ENST00000486806 ZNF560Q96MR9 790 aa10.31□□□□□ -0.76
MCF2L-227ENST00000486806 YME1L1Q96TA2 773 aa10.31□□□□□ -0.76
MCF2L-227ENST00000486806 TMEM175Q9BSA9 504 aa10.31□□□□□ -0.76
MCF2L-227ENST00000486806 PI4K2AQ9BTU6 479 aa10.31□□□□□ -0.76
MCF2L-227ENST00000486806 UBE2OQ9C0C9 1292 aaKnown RBP10.31□□□□□ -0.76
MCF2L-227ENST00000486806 TTYH3Q9C0H2 523 aa10.31□□□□□ -0.76
MCF2L-227ENST00000486806 GANQ9H2C0 597 aa10.31□□□□□ -0.76
MCF2L-227ENST00000486806 PRO3102Q9H379 93 aa10.31□□□□□ -0.76
MCF2L-227ENST00000486806 CWH43Q9H720 699 aa10.31□□□□□ -0.76
MCF2L-227ENST00000486806 NRDE2Q9H7Z3 1164 aa10.31□□□□□ -0.76
MCF2L-227ENST00000486806 APOBEC3GQ9HC16 384 aaKnown RBP10.31□□□□□ -0.76
MCF2L-227ENST00000486806 PLCB1Q9NQ66 1216 aa10.31□□□□□ -0.76
MCF2L-227ENST00000486806 DNAJB4Q9UDY4 337 aa10.31□□□□□ -0.76
MCF2L-227ENST00000486806 AGAP1Q9UPQ3 857 aa10.31□□□□□ -0.76
MCF2L-227ENST00000486806 CITO14578 2027 aa10.31□□□□□ -0.76
MCF2L-227ENST00000486806 RANBP2P49792 3224 aaKnown RBP10.31□□□□□ -0.76
MCF2L-227ENST00000486806 EPHB6O15197 1021 aa10.3□□□□□ -0.76
MCF2L-227ENST00000486806 SPTLC1O15269 473 aa10.3□□□□□ -0.76
MCF2L-227ENST00000486806 PHACTR2O75167 634 aa10.3□□□□□ -0.76
MCF2L-227ENST00000486806 NOL4O94818 638 aa10.3□□□□□ -0.76
MCF2L-227ENST00000486806 KIF4AO95239 1232 aa10.3□□□□□ -0.76
MCF2L-227ENST00000486806 ADCY5O95622 1261 aa10.3□□□□□ -0.76
MCF2L-227ENST00000486806 KRT19P08727 400 aa10.3□□□□□ -0.76
MCF2L-227ENST00000486806 IGFBP6P24592 240 aaPredicted RBP10.3□□□□□ -0.76
MCF2L-227ENST00000486806 CDC25BP30305 580 aa10.3□□□□□ -0.76
MCF2L-227ENST00000486806 PNPLA4P41247 253 aa10.3□□□□□ -0.76
MCF2L-227ENST00000486806 ASPAP45381 313 aa10.3□□□□□ -0.76
MCF2L-227ENST00000486806 APBA1Q02410 837 aa10.3□□□□□ -0.76
MCF2L-227ENST00000486806 RNASELQ05823 741 aaKnown RBP10.3□□□□□ -0.76
MCF2L-227ENST00000486806 TRPC3Q13507 836 aa10.3□□□□□ -0.76
MCF2L-227ENST00000486806 BTG3Q14201 252 aaPredicted RBP10.3□□□□□ -0.76
MCF2L-227ENST00000486806 SGSM1Q2NKQ1 1148 aa10.3□□□□□ -0.76
MCF2L-227ENST00000486806 ZNF699Q32M78 642 aa10.3□□□□□ -0.76
MCF2L-227ENST00000486806 FIGNQ5HY92 759 aa10.3□□□□□ -0.76
MCF2L-227ENST00000486806 FAM109BQ6ICB4 259 aaPredicted RBP10.3□□□□□ -0.76
MCF2L-227ENST00000486806 SPOPLQ6IQ16 392 aa10.3□□□□□ -0.76
MCF2L-227ENST00000486806 ELMO3Q96BJ8 720 aa10.3□□□□□ -0.76
MCF2L-227ENST00000486806 DDX27Q96GQ7 796 aaKnown RBP10.3□□□□□ -0.76
MCF2L-227ENST00000486806 FAXDC2Q96IV6 333 aa10.3□□□□□ -0.76
MCF2L-227ENST00000486806 RAD9AQ99638 391 aa10.3□□□□□ -0.76
MCF2L-227ENST00000486806 LSM14BQ9BX40 385 aaKnown RBP10.3□□□□□ -0.76
MCF2L-227ENST00000486806 MARCH5Q9NX47 278 aa10.3□□□□□ -0.76
MCF2L-227ENST00000486806 APEX2Q9UBZ4 518 aa10.3□□□□□ -0.76
MCF2L-227ENST00000486806 FBXL5Q9UKA1 691 aa10.3□□□□□ -0.76
MCF2L-227ENST00000486806 INSL6Q9Y581 213 aa10.3□□□□□ -0.76
MCF2L-227ENST00000486806 NUB1Q9Y5A7 615 aa10.3□□□□□ -0.76
MCF2L-227ENST00000486806 MRPL42Q9Y6G3 142 aaKnown RBP10.3□□□□□ -0.76
MCF2L-227ENST00000486806 TNRC18O15417 2968 aaPredicted RBP10.3□□□□□ -0.76
MCF2L-227ENST00000486806 FNDC1Q4ZHG4 1894 aaPredicted RBP10.3□□□□□ -0.76
MCF2L-227ENST00000486806 LAMA3Q16787 3333 aa10.29□□□□□ -0.76
MCF2L-227ENST00000486806 F8W810 466 aa10.29□□□□□ -0.76
MCF2L-227ENST00000486806 NRP1O14786 923 aa10.29□□□□□ -0.76
MCF2L-227ENST00000486806 CAPN15O75808 1086 aa10.29□□□□□ -0.76
MCF2L-227ENST00000486806 ITGB1P05556 798 aa10.29□□□□□ -0.76
MCF2L-227ENST00000486806 GALTP07902 379 aa10.29□□□□□ -0.76
MCF2L-227ENST00000486806 UCHL3P15374 230 aa10.29□□□□□ -0.76
MCF2L-227ENST00000486806 RFX1P22670 979 aa10.29□□□□□ -0.76
MCF2L-227ENST00000486806 SLC11A1P49279 550 aa10.29□□□□□ -0.76
MCF2L-227ENST00000486806 TAF6P49848 677 aa10.29□□□□□ -0.76
MCF2L-227ENST00000486806 LILRA4P59901 499 aa10.29□□□□□ -0.76
MCF2L-227ENST00000486806 GCNT1Q02742 428 aa10.29□□□□□ -0.76
MCF2L-227ENST00000486806 MYO1EQ12965 1108 aa10.29□□□□□ -0.76
MCF2L-227ENST00000486806 SV2CQ496J9 727 aa10.29□□□□□ -0.76
MCF2L-227ENST00000486806 KLHDC7AQ5VTJ3 777 aa10.29□□□□□ -0.76
MCF2L-227ENST00000486806 SPECC1LQ69YQ0 1117 aa10.29□□□□□ -0.76
MCF2L-227ENST00000486806 PHLDB3Q6NSJ2 640 aa10.29□□□□□ -0.76
MCF2L-227ENST00000486806 LIMS2Q7Z4I7 341 aa10.29□□□□□ -0.76
MCF2L-227ENST00000486806 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.29□□□□□ -0.76
MCF2L-227ENST00000486806 ARHGEF19Q8IW93 802 aa10.29□□□□□ -0.76
MCF2L-227ENST00000486806 CLP1Q92989 425 aaKnown RBP10.29□□□□□ -0.76
MCF2L-227ENST00000486806 HPDLQ96IR7 371 aa10.29□□□□□ -0.76
MCF2L-227ENST00000486806 NT5C1BQ96P26 610 aa10.29□□□□□ -0.76
MCF2L-227ENST00000486806 FAM193BQ96PV7 902 aaPredicted RBP10.29□□□□□ -0.76
MCF2L-227ENST00000486806 NAA15Q9BXJ9 866 aaKnown RBP10.29□□□□□ -0.76
MCF2L-227ENST00000486806 IMPG2Q9BZV3 1241 aa10.29□□□□□ -0.76
MCF2L-227ENST00000486806 NIF3L1Q9GZT8 377 aa10.29□□□□□ -0.76
MCF2L-227ENST00000486806 FAM207AQ9NSI2 230 aaPredicted RBP10.29□□□□□ -0.76
MCF2L-227ENST00000486806 GDAP2Q9NXN4 497 aa10.29□□□□□ -0.76
MCF2L-227ENST00000486806 AJAP1Q9UKB5 411 aaPredicted RBP10.29□□□□□ -0.76
MCF2L-227ENST00000486806 DAAM1Q9Y4D1 1078 aa10.29□□□□□ -0.76
MCF2L-227ENST00000486806 LCHNA4D1U4 455 aa10.28□□□□□ -0.76
MCF2L-227ENST00000486806 KPNA7A9QM74 516 aa10.28□□□□□ -0.76
MCF2L-227ENST00000486806 TLL1O43897 1013 aa10.28□□□□□ -0.76
MCF2L-227ENST00000486806 B3GAT3O94766 335 aa10.28□□□□□ -0.76
MCF2L-227ENST00000486806 EFEMP2O95967 443 aa10.28□□□□□ -0.76
MCF2L-227ENST00000486806 GYPCP04921 128 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms