RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 TEX33O43247 280 aa13.8□□□□□ -0.2
HDAC6-229ENST00000486665 HOXA2O43364 376 aa13.8□□□□□ -0.2
HDAC6-229ENST00000486665 B4GALT3O60512 393 aa13.8□□□□□ -0.2
HDAC6-229ENST00000486665 LRRN2O75325 713 aa13.8□□□□□ -0.2
HDAC6-229ENST00000486665 DDHD2O94830 711 aa13.8□□□□□ -0.2
HDAC6-229ENST00000486665 SERPINC1P01008 464 aa13.8□□□□□ -0.2
HDAC6-229ENST00000486665 CST3P01034 146 aaPredicted RBP13.8□□□□□ -0.2
HDAC6-229ENST00000486665 THP07101 528 aa13.8□□□□□ -0.2
HDAC6-229ENST00000486665 IGFBP6P24592 240 aaPredicted RBP13.8□□□□□ -0.2
HDAC6-229ENST00000486665 GTF2H1P32780 548 aa13.8□□□□□ -0.2
HDAC6-229ENST00000486665 FMO5P49326 533 aa13.8□□□□□ -0.2
HDAC6-229ENST00000486665 PTPN21Q16825 1174 aa13.8□□□□□ -0.2
HDAC6-229ENST00000486665 ZACNQ401N2 412 aa13.8□□□□□ -0.2
HDAC6-229ENST00000486665 PAN2Q504Q3 1202 aaKnown RBP13.8□□□□□ -0.2
HDAC6-229ENST00000486665 TDRD10Q5VZ19 366 aaKnown RBP13.8□□□□□ -0.2
HDAC6-229ENST00000486665 TRAPPC11Q7Z392 1133 aa13.8□□□□□ -0.2
HDAC6-229ENST00000486665 USP37Q86T82 979 aa13.8□□□□□ -0.2
HDAC6-229ENST00000486665 ANKRD20A12PQ8NF67 263 aa13.8□□□□□ -0.2
HDAC6-229ENST00000486665 CXorf38Q8TB03 319 aa13.8□□□□□ -0.2
HDAC6-229ENST00000486665 URGCPQ8TCY9 931 aa13.8□□□□□ -0.2
HDAC6-229ENST00000486665 CACTINQ8WUQ7 758 aaKnown RBP13.8□□□□□ -0.2
HDAC6-229ENST00000486665 ZNF689Q96CS4 500 aaPredicted RBP13.8□□□□□ -0.2
HDAC6-229ENST00000486665 TGS1Q96RS0 853 aaKnown RBP13.8□□□□□ -0.2
HDAC6-229ENST00000486665 TSPAN18Q96SJ8 248 aa13.8□□□□□ -0.2
HDAC6-229ENST00000486665 RC3H2Q9HBD1 1191 aaKnown RBP13.8□□□□□ -0.2
HDAC6-229ENST00000486665 GOLGA2P5Q9HBQ8 144 aa13.8□□□□□ -0.2
HDAC6-229ENST00000486665 TMEM8AQ9HCN3 771 aa13.8□□□□□ -0.2
HDAC6-229ENST00000486665 RTN4Q9NQC3 1192 aaKnown RBP13.8□□□□□ -0.2
HDAC6-229ENST00000486665 TBC1D13Q9NVG8 400 aa13.8□□□□□ -0.2
HDAC6-229ENST00000486665 DPP3Q9NY33 737 aa13.8□□□□□ -0.2
HDAC6-229ENST00000486665 IFNKQ9P0W0 207 aa13.8□□□□□ -0.2
HDAC6-229ENST00000486665 HCSTQ9UBK5 93 aa13.8□□□□□ -0.2
HDAC6-229ENST00000486665 CACNG4Q9UBN1 327 aa13.8□□□□□ -0.2
HDAC6-229ENST00000486665 SIX4Q9UIU6 781 aa13.8□□□□□ -0.2
HDAC6-229ENST00000486665 A0A1B0GTH6 734 aa13.79□□□□□ -0.2
HDAC6-229ENST00000486665 GOLGA6L3A6NEY3 463 aa13.79□□□□□ -0.2
HDAC6-229ENST00000486665 LGALS16A8MUM7 142 aa13.79□□□□□ -0.2
HDAC6-229ENST00000486665 STX10O60499 249 aa13.79□□□□□ -0.2
HDAC6-229ENST00000486665 VNN1O95497 513 aa13.79□□□□□ -0.2
HDAC6-229ENST00000486665 TNNC2P02585 160 aa13.79□□□□□ -0.2
HDAC6-229ENST00000486665 TMEM191BP0C7N4 346 aa13.79□□□□□ -0.2
HDAC6-229ENST00000486665 AP3M2P53677 418 aa13.79□□□□□ -0.2
HDAC6-229ENST00000486665 UBASH3AP57075 661 aa13.79□□□□□ -0.2
HDAC6-229ENST00000486665 GRIK3Q13003 919 aa13.79□□□□□ -0.2
HDAC6-229ENST00000486665 NR1I3Q14994 352 aa13.79□□□□□ -0.2
HDAC6-229ENST00000486665 NT5DC4Q86YG4 428 aa13.79□□□□□ -0.2
HDAC6-229ENST00000486665 ABI1Q8IZP0 508 aa13.79□□□□□ -0.2
HDAC6-229ENST00000486665 C1orf127Q8N9H9 656 aa13.79□□□□□ -0.2
HDAC6-229ENST00000486665 BEST2Q8NFU1 509 aa13.79□□□□□ -0.2
HDAC6-229ENST00000486665 RABGGTAQ92696 567 aa13.79□□□□□ -0.2
HDAC6-229ENST00000486665 SEMA4DQ92854 862 aa13.79□□□□□ -0.2
HDAC6-229ENST00000486665 ELMO3Q96BJ8 720 aa13.79□□□□□ -0.2
HDAC6-229ENST00000486665 ANKRD36BP1Q96IX9 119 aa13.79□□□□□ -0.2
HDAC6-229ENST00000486665 C1QTNF1Q9BXJ1 281 aa13.79□□□□□ -0.2
HDAC6-229ENST00000486665 UBQLN1Q9UMX0 589 aaKnown RBP13.79□□□□□ -0.2
HDAC6-229ENST00000486665 ANK1P16157 1881 aa13.78□□□□□ -0.2
HDAC6-229ENST00000486665 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.78□□□□□ -0.2
HDAC6-229ENST00000486665 PES1O00541 588 aaKnown RBP13.78□□□□□ -0.2
HDAC6-229ENST00000486665 PPEF2O14830 753 aa13.78□□□□□ -0.2
HDAC6-229ENST00000486665 PMM2O15305 246 aa13.78□□□□□ -0.2
HDAC6-229ENST00000486665 ITGB3P05106 788 aa13.78□□□□□ -0.2
HDAC6-229ENST00000486665 CYP3A5P20815 502 aa13.78□□□□□ -0.2
HDAC6-229ENST00000486665 MXI1P50539 228 aa13.78□□□□□ -0.2
HDAC6-229ENST00000486665 HTRA4P83105 476 aaPredicted RBP13.78□□□□□ -0.2
HDAC6-229ENST00000486665 PLCB2Q00722 1185 aa13.78□□□□□ -0.2
HDAC6-229ENST00000486665 KCNMA1Q12791 1236 aa13.78□□□□□ -0.2
HDAC6-229ENST00000486665 BIRC3Q13489 604 aa13.78□□□□□ -0.2
HDAC6-229ENST00000486665 GSE1Q14687 1217 aa13.78□□□□□ -0.2
HDAC6-229ENST00000486665 KRT39Q6A163 491 aa13.78□□□□□ -0.2
HDAC6-229ENST00000486665 SARM1Q6SZW1 724 aa13.78□□□□□ -0.2
HDAC6-229ENST00000486665 TAS1R2Q8TE23 839 aa13.78□□□□□ -0.2
HDAC6-229ENST00000486665 FAM122AQ96E09 287 aa13.78□□□□□ -0.2
HDAC6-229ENST00000486665 PAAF1Q9BRP4 392 aa13.78□□□□□ -0.2
HDAC6-229ENST00000486665 CRACR2AQ9BSW2 395 aa13.78□□□□□ -0.2
HDAC6-229ENST00000486665 XPO4Q9C0E2 1151 aaKnown RBP13.78□□□□□ -0.2
HDAC6-229ENST00000486665 CWH43Q9H720 699 aa13.78□□□□□ -0.2
HDAC6-229ENST00000486665 NRDE2Q9H7Z3 1164 aa13.78□□□□□ -0.2
HDAC6-229ENST00000486665 UBE2ZQ9H832 354 aaPredicted RBP13.78□□□□□ -0.2
HDAC6-229ENST00000486665 LMCD1Q9NZU5 365 aa13.78□□□□□ -0.2
HDAC6-229ENST00000486665 KANSL3Q9P2N6 904 aa13.78□□□□□ -0.2
HDAC6-229ENST00000486665 AGAP1Q9UPQ3 857 aa13.78□□□□□ -0.2
HDAC6-229ENST00000486665 C5orf42Q9H799 3197 aa13.78□□□□□ -0.2
HDAC6-229ENST00000486665 COL4A6Q14031 1691 aa13.78□□□□□ -0.2
HDAC6-229ENST00000486665 MYO7AQ13402 2215 aa13.78□□□□□ -0.2
HDAC6-229ENST00000486665 ANO9A1A5B4 782 aa13.77□□□□□ -0.21
HDAC6-229ENST00000486665 CASTOR2A6NHX0 329 aa13.77□□□□□ -0.21
HDAC6-229ENST00000486665 PIRO00625 290 aa13.77□□□□□ -0.21
HDAC6-229ENST00000486665 PHACTR2O75167 634 aa13.77□□□□□ -0.21
HDAC6-229ENST00000486665 HLA-DRAP01903 254 aa13.77□□□□□ -0.21
HDAC6-229ENST00000486665 TPM2P07951 284 aa13.77□□□□□ -0.21
HDAC6-229ENST00000486665 LRPAP1P30533 357 aa13.77□□□□□ -0.21
HDAC6-229ENST00000486665 POLR2BP30876 1174 aaKnown RBP13.77□□□□□ -0.21
HDAC6-229ENST00000486665 KLK7P49862 253 aa13.77□□□□□ -0.21
HDAC6-229ENST00000486665 CLCNKBP51801 687 aa13.77□□□□□ -0.21
HDAC6-229ENST00000486665 MYL7Q01449 175 aa13.77□□□□□ -0.21
HDAC6-229ENST00000486665 UBXN1Q04323 297 aa13.77□□□□□ -0.21
HDAC6-229ENST00000486665 RNASELQ05823 741 aaKnown RBP13.77□□□□□ -0.21
HDAC6-229ENST00000486665 DSC1Q08554 894 aa13.77□□□□□ -0.21
HDAC6-229ENST00000486665 TUSC3Q13454 348 aa13.77□□□□□ -0.21
HDAC6-229ENST00000486665 FILIP1LQ4L180 1135 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms