RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 KIF12Q96FN5 646 aa24.42■■□□□ 1.5
SREBF1-214ENST00000486311 CYP4F11Q9HBI6 524 aa24.42■■□□□ 1.5
SREBF1-214ENST00000486311 GDE1Q9NZC3 331 aa24.42■■□□□ 1.5
SREBF1-214ENST00000486311 MAFFQ9ULX9 164 aa24.42■■□□□ 1.5
SREBF1-214ENST00000486311 UBQLN1Q9UMX0 589 aaKnown RBP24.42■■□□□ 1.5
SREBF1-214ENST00000486311 K7ENM7 598 aa24.41■■□□□ 1.5
SREBF1-214ENST00000486311 HNRNPDLO14979 420 aaKnown RBP24.41■■□□□ 1.5
SREBF1-214ENST00000486311 FAM189A1O60320 539 aa24.41■■□□□ 1.5
SREBF1-214ENST00000486311 SEC24AO95486 1093 aa24.41■■□□□ 1.5
SREBF1-214ENST00000486311 PTPN2P17706 415 aa24.41■■□□□ 1.5
SREBF1-214ENST00000486311 TNFSF9P41273 254 aa24.41■■□□□ 1.5
SREBF1-214ENST00000486311 STARD6P59095 220 aa24.41■■□□□ 1.5
SREBF1-214ENST00000486311 PPP2R3AQ06190 1150 aa24.41■■□□□ 1.5
SREBF1-214ENST00000486311 SPAG1Q07617 926 aa24.41■■□□□ 1.5
SREBF1-214ENST00000486311 ASCL5Q7RTU5 278 aa24.41■■□□□ 1.5
SREBF1-214ENST00000486311 FRMD5Q7Z6J6 570 aa24.41■■□□□ 1.5
SREBF1-214ENST00000486311 RASSF8Q8NHQ8 419 aa24.41■■□□□ 1.5
SREBF1-214ENST00000486311 ING5Q8WYH8 240 aa24.41■■□□□ 1.5
SREBF1-214ENST00000486311 AFF4Q9UHB7 1163 aaKnown RBP24.41■■□□□ 1.5
SREBF1-214ENST00000486311 INSL5Q9Y5Q6 135 aa24.41■■□□□ 1.5
SREBF1-214ENST00000486311 PRR23AA6NEV1 266 aa24.4■■□□□ 1.5
SREBF1-214ENST00000486311 LACTBL1A8MY62 500 aa24.4■■□□□ 1.5
SREBF1-214ENST00000486311 M0QZQ0 153 aa24.4■■□□□ 1.5
SREBF1-214ENST00000486311 OGTO15294 1046 aa24.4■■□□□ 1.5
SREBF1-214ENST00000486311 TRAK2O60296 914 aa24.4■■□□□ 1.5
SREBF1-214ENST00000486311 KRT18P05783 430 aaKnown RBP24.4■■□□□ 1.5
SREBF1-214ENST00000486311 ADRB2P07550 413 aa24.4■■□□□ 1.5
SREBF1-214ENST00000486311 MARCKSP29966 332 aaPredicted RBP24.4■■□□□ 1.5
SREBF1-214ENST00000486311 AARSP49588 968 aaKnown RBP eCLIP24.4■■□□□ 1.5
SREBF1-214ENST00000486311 ENOX2Q16206 610 aaKnown RBP24.4■■□□□ 1.5
SREBF1-214ENST00000486311 ZBTB41Q5SVQ8 909 aa24.4■■□□□ 1.5
SREBF1-214ENST00000486311 TMEM130Q8N3G9 435 aa24.4■■□□□ 1.5
SREBF1-214ENST00000486311 SHDQ96IW2 340 aa24.4■■□□□ 1.5
SREBF1-214ENST00000486311 TSPAN18Q96SJ8 248 aa24.4■■□□□ 1.5
SREBF1-214ENST00000486311 FIZ1Q96SL8 496 aa24.4■■□□□ 1.5
SREBF1-214ENST00000486311 KXD1Q9BQD3 176 aa24.4■■□□□ 1.5
SREBF1-214ENST00000486311 CCSER1Q9C0I3 900 aa24.4■■□□□ 1.5
SREBF1-214ENST00000486311 DLGAP2Q9P1A6 1054 aa24.4■■□□□ 1.5
SREBF1-214ENST00000486311 SIT1Q9Y3P8 196 aa24.4■■□□□ 1.5
SREBF1-214ENST00000486311 TRIP11Q15643 1979 aa24.4■■□□□ 1.5
SREBF1-214ENST00000486311 A0A0B4J269 797 aa24.39■■□□□ 1.49
SREBF1-214ENST00000486311 ABCD1P33897 745 aa24.39■■□□□ 1.49
SREBF1-214ENST00000486311 PRSS36Q5K4E3 855 aa24.39■■□□□ 1.49
SREBF1-214ENST00000486311 LARP4BQ92615 738 aaKnown RBP24.39■■□□□ 1.49
SREBF1-214ENST00000486311 MCRS1Q96EZ8 462 aa24.39■■□□□ 1.49
SREBF1-214ENST00000486311 RPF1Q9H9Y2 349 aaKnown RBP24.39■■□□□ 1.49
SREBF1-214ENST00000486311 VPS13AQ96RL7 3174 aa24.39■■□□□ 1.49
SREBF1-214ENST00000486311 DOCK6Q96HP0 2047 aa24.39■■□□□ 1.49
SREBF1-214ENST00000486311 VPS37CA5D8V6 355 aaPredicted RBP24.38■■□□□ 1.49
SREBF1-214ENST00000486311 XPOTO43592 962 aaKnown RBP24.38■■□□□ 1.49
SREBF1-214ENST00000486311 TBCAO75347 108 aaKnown RBP24.38■■□□□ 1.49
SREBF1-214ENST00000486311 ECI2O75521 394 aa24.38■■□□□ 1.49
SREBF1-214ENST00000486311 MICAL2O94851 1124 aa24.38■■□□□ 1.49
SREBF1-214ENST00000486311 OAZ2O95190 189 aa24.38■■□□□ 1.49
SREBF1-214ENST00000486311 DCNP07585 359 aaKnown RBP24.38■■□□□ 1.49
SREBF1-214ENST00000486311 CEBPBP17676 345 aa24.38■■□□□ 1.49
SREBF1-214ENST00000486311 PDCP20941 246 aa24.38■■□□□ 1.49
SREBF1-214ENST00000486311 DDIT3P35638 169 aa24.38■■□□□ 1.49
SREBF1-214ENST00000486311 GTF2BQ00403 316 aa24.38■■□□□ 1.49
SREBF1-214ENST00000486311 PFKPQ01813 784 aa24.38■■□□□ 1.49
SREBF1-214ENST00000486311 ADCY1Q08828 1119 aa24.38■■□□□ 1.49
SREBF1-214ENST00000486311 POTEHQ6S545 545 aa24.38■■□□□ 1.49
SREBF1-214ENST00000486311 MAP4K3Q8IVH8 894 aa24.38■■□□□ 1.49
SREBF1-214ENST00000486311 NKD2Q969F2 451 aaPredicted RBP24.38■■□□□ 1.49
SREBF1-214ENST00000486311 CORO1BQ9BR76 489 aa24.38■■□□□ 1.49
SREBF1-214ENST00000486311 MSTO1Q9BUK6 570 aa24.38■■□□□ 1.49
SREBF1-214ENST00000486311 DDX23Q9BUQ8 820 aaKnown RBP24.38■■□□□ 1.49
SREBF1-214ENST00000486311 OXCT2Q9BYC2 517 aaPredicted RBP24.38■■□□□ 1.49
SREBF1-214ENST00000486311 FOXQ1Q9C009 403 aa24.38■■□□□ 1.49
SREBF1-214ENST00000486311 ZHX3Q9H4I2 956 aa24.38■■□□□ 1.49
SREBF1-214ENST00000486311 CFAP54Q96N23 3096 aa24.37■■□□□ 1.49
SREBF1-214ENST00000486311 PRKCQQ04759 706 aa24.37■■□□□ 1.49
SREBF1-214ENST00000486311 YWHAHQ04917 246 aaPredicted RBP24.37■■□□□ 1.49
SREBF1-214ENST00000486311 SNW1Q13573 536 aaKnown RBP24.37■■□□□ 1.49
SREBF1-214ENST00000486311 MLF2Q15773 248 aaPredicted RBP24.37■■□□□ 1.49
SREBF1-214ENST00000486311 SLC44A4Q53GD3 710 aa24.37■■□□□ 1.49
SREBF1-214ENST00000486311 SPECC1Q5M775 1068 aa24.37■■□□□ 1.49
SREBF1-214ENST00000486311 SLC39A4Q6P5W5 647 aa24.37■■□□□ 1.49
SREBF1-214ENST00000486311 CD302Q8IX05 232 aa24.37■■□□□ 1.49
SREBF1-214ENST00000486311 BEST2Q8NFU1 509 aa24.37■■□□□ 1.49
SREBF1-214ENST00000486311 PJA1Q8NG27 643 aa24.37■■□□□ 1.49
SREBF1-214ENST00000486311 CPSF3Q9UKF6 684 aaKnown RBP24.37■■□□□ 1.49
SREBF1-214ENST00000486311 CLIC4Q9Y696 253 aa24.37■■□□□ 1.49
SREBF1-214ENST00000486311 ZNF197O14709 1029 aa24.36■■□□□ 1.49
SREBF1-214ENST00000486311 CPB1P15086 417 aa24.36■■□□□ 1.49
SREBF1-214ENST00000486311 NMT1P30419 496 aaKnown RBP24.36■■□□□ 1.49
SREBF1-214ENST00000486311 GUCY2FP51841 1108 aa24.36■■□□□ 1.49
SREBF1-214ENST00000486311 PTPAQ15257 358 aa24.36■■□□□ 1.49
SREBF1-214ENST00000486311 SPATA1Q5VX52 437 aa24.36■■□□□ 1.49
SREBF1-214ENST00000486311 RNF19BQ6ZMZ0 732 aa24.36■■□□□ 1.49
SREBF1-214ENST00000486311 ELMOD1Q8N336 334 aa24.36■■□□□ 1.49
SREBF1-214ENST00000486311 TCEAL4Q96EI5 215 aa24.36■■□□□ 1.49
SREBF1-214ENST00000486311 EPSTI1Q96J88 318 aa24.36■■□□□ 1.49
SREBF1-214ENST00000486311 ST6GALNAC4Q9H4F1 302 aa24.36■■□□□ 1.49
SREBF1-214ENST00000486311 TIMM13Q9Y5L4 95 aaPredicted RBP24.36■■□□□ 1.49
SREBF1-214ENST00000486311 RIF1Q5UIP0 2472 aaKnown RBP24.36■■□□□ 1.49
SREBF1-214ENST00000486311 NOTCH4Q99466 2003 aa24.35■■□□□ 1.49
SREBF1-214ENST00000486311 KANSL1LA0AUZ9 987 aa24.35■■□□□ 1.49
SREBF1-214ENST00000486311 TWF1Q12792 350 aa24.35■■□□□ 1.49
SREBF1-214ENST00000486311 IQCEQ6IPM2 695 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms