RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 ABLIM3O94929 683 aa7.63□□□□□ -1.19
VPS50-218ENST00000485994 LDHAP00338 332 aaKnown RBP7.63□□□□□ -1.19
VPS50-218ENST00000485994 KRT18P05783 430 aaKnown RBP7.63□□□□□ -1.19
VPS50-218ENST00000485994 HNRNPA1P09651 372 aaKnown RBP eCLIP7.63□□□□□ -1.19
VPS50-218ENST00000485994 NMT1P30419 496 aaKnown RBP7.63□□□□□ -1.19
VPS50-218ENST00000485994 CA8P35219 290 aa7.63□□□□□ -1.19
VPS50-218ENST00000485994 AARSP49588 968 aaKnown RBP eCLIP7.63□□□□□ -1.19
VPS50-218ENST00000485994 LIG4P49917 911 aa7.63□□□□□ -1.19
VPS50-218ENST00000485994 ZXDAP98168 799 aa7.63□□□□□ -1.19
VPS50-218ENST00000485994 AMPD3Q01432 767 aa7.63□□□□□ -1.19
VPS50-218ENST00000485994 CEBPZQ03701 1054 aaKnown RBP7.63□□□□□ -1.19
VPS50-218ENST00000485994 DHX8Q14562 1220 aaKnown RBP7.63□□□□□ -1.19
VPS50-218ENST00000485994 STK38Q15208 465 aa7.63□□□□□ -1.19
VPS50-218ENST00000485994 E2F4Q16254 413 aa7.63□□□□□ -1.19
VPS50-218ENST00000485994 RTP2Q5QGT7 225 aa7.63□□□□□ -1.19
VPS50-218ENST00000485994 RARS2Q5T160 578 aaKnown RBP7.63□□□□□ -1.19
VPS50-218ENST00000485994 SPATA1Q5VX52 437 aa7.63□□□□□ -1.19
VPS50-218ENST00000485994 SLC8B1Q6J4K2 584 aa7.63□□□□□ -1.19
VPS50-218ENST00000485994 SLC39A4Q6P5W5 647 aa7.63□□□□□ -1.19
VPS50-218ENST00000485994 OTOP3Q7RTS5 596 aa7.63□□□□□ -1.19
VPS50-218ENST00000485994 ZBTB33Q86T24 672 aa7.63□□□□□ -1.19
VPS50-218ENST00000485994 NT5DC4Q86YG4 428 aa7.63□□□□□ -1.19
VPS50-218ENST00000485994 C12orf76Q8N812 135 aaPredicted RBP7.63□□□□□ -1.19
VPS50-218ENST00000485994 IQUBQ8NA54 791 aa7.63□□□□□ -1.19
VPS50-218ENST00000485994 KREMEN2Q8NCW0 462 aa7.63□□□□□ -1.19
VPS50-218ENST00000485994 RASSF8Q8NHQ8 419 aa7.63□□□□□ -1.19
VPS50-218ENST00000485994 KCNG4Q8TDN1 519 aa7.63□□□□□ -1.19
VPS50-218ENST00000485994 ZNF516Q92618 1163 aa7.63□□□□□ -1.19
VPS50-218ENST00000485994 RPGRIP1Q96KN7 1286 aa7.63□□□□□ -1.19
VPS50-218ENST00000485994 SUSD3Q96L08 255 aa7.63□□□□□ -1.19
VPS50-218ENST00000485994 PYM1Q9BRP8 204 aaKnown RBP7.63□□□□□ -1.19
VPS50-218ENST00000485994 TNMDQ9H2S6 317 aa7.63□□□□□ -1.19
VPS50-218ENST00000485994 RPF1Q9H9Y2 349 aaKnown RBP7.63□□□□□ -1.19
VPS50-218ENST00000485994 MAGEF1Q9HAY2 307 aa7.63□□□□□ -1.19
VPS50-218ENST00000485994 WDR6Q9NNW5 1121 aaKnown RBP7.63□□□□□ -1.19
VPS50-218ENST00000485994 MAN1C1Q9NR34 630 aa7.63□□□□□ -1.19
VPS50-218ENST00000485994 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.63□□□□□ -1.19
VPS50-218ENST00000485994 UBQLN1Q9UMX0 589 aaKnown RBP7.63□□□□□ -1.19
VPS50-218ENST00000485994 EXOC7Q9UPT5 735 aa7.63□□□□□ -1.19
VPS50-218ENST00000485994 ZFP37Q9Y6Q3 630 aaPredicted RBP7.63□□□□□ -1.19
VPS50-218ENST00000485994 PLXNA3P51805 1871 aa7.63□□□□□ -1.19
VPS50-218ENST00000485994 CACNA1HO95180 2353 aa7.63□□□□□ -1.19
VPS50-218ENST00000485994 SCN1AP35498 2009 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 NOTCH4Q99466 2003 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 MUC6Q6W4X9 2439 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 DENND4AQ7Z401 1863 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 A0A087X0B3 334 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 LACTBL1A8MY62 500 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 C3orf80F5H4A9 247 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 H7C4K7 107 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 K7ENM7 598 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 SMAPO00193 183 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 PODXLO00592 558 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 HNRNPDLO14979 420 aaKnown RBP7.62□□□□□ -1.19
VPS50-218ENST00000485994 KIAA0391O15091 583 aaKnown RBP7.62□□□□□ -1.19
VPS50-218ENST00000485994 OAZ2O95190 189 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 HSP90AA1P07900 732 aaKnown RBP7.62□□□□□ -1.19
VPS50-218ENST00000485994 GARTP22102 1010 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 ADSSP30520 456 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 OR1D2P34982 312 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 STAT6P42226 847 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 OSTNP61366 133 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 SNRPFP62306 86 aaKnown RBP7.62□□□□□ -1.19
VPS50-218ENST00000485994 SIGLEC14Q08ET2 396 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 PSMD5Q16401 504 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 PTPN21Q16825 1174 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 GLRA4Q5JXX5 417 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 L1TD1Q5T7N2 865 aaKnown RBP7.62□□□□□ -1.19
VPS50-218ENST00000485994 TMC5Q6UXY8 1006 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 TRIM67Q6ZTA4 783 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 DYMQ7RTS9 669 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 PALB2Q86YC2 1186 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 CCDC65Q8IXS2 484 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 UBALD2Q8IYN6 164 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 C3orf58Q8NDZ4 430 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 APPL2Q8NEU8 664 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 ZNF461Q8TAF7 563 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 RABGGTAQ92696 567 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 STAMQ92783 540 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 ZNF707Q96C28 371 aaPredicted RBP7.62□□□□□ -1.19
VPS50-218ENST00000485994 ACSF2Q96CM8 615 aaPredicted RBP7.62□□□□□ -1.19
VPS50-218ENST00000485994 BICD1Q96G01 975 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 ACCSQ96QU6 501 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 C7orf25Q9BPX7 421 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 TMEM206Q9H813 350 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 PANK4Q9NVE7 773 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 IGSF9Q9P2J2 1179 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 EPS15L1Q9UBC2 864 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 MUTYHQ9UIF7 546 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 FBXW11Q9UKB1 542 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 AGO2Q9UKV8 859 aaKnown RBP7.62□□□□□ -1.19
VPS50-218ENST00000485994 PCDHA7Q9UN72 937 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 ANK1P16157 1881 aa7.62□□□□□ -1.19
VPS50-218ENST00000485994 PIEZO1Q92508 2521 aa7.61□□□□□ -1.19
VPS50-218ENST00000485994 PVALEFA0A1B0GWK0 134 aa7.61□□□□□ -1.19
VPS50-218ENST00000485994 ANO9A1A5B4 782 aa7.61□□□□□ -1.19
VPS50-218ENST00000485994 ARHGEF37A1IGU5 675 aa7.61□□□□□ -1.19
VPS50-218ENST00000485994 C2CD4DB7Z1M9 353 aa7.61□□□□□ -1.19
VPS50-218ENST00000485994 ANKRD63C9JTQ0 380 aa7.61□□□□□ -1.19
VPS50-218ENST00000485994 PIRO00625 290 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms