RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 PADI3Q9ULW8 664 aa7.59□□□□□ -1.19
SMC4-217ENST00000485867 PCDHA4Q9UN74 947 aa7.59□□□□□ -1.19
SMC4-217ENST00000485867 CYP8B1Q9UNU6 501 aa7.59□□□□□ -1.19
SMC4-217ENST00000485867 LAMA4Q16363 1823 aa7.58□□□□□ -1.2
SMC4-217ENST00000485867 C2orf71A6NGG8 1288 aa7.58□□□□□ -1.2
SMC4-217ENST00000485867 PRR5-ARHGAP8B1AHC4 643 aa7.58□□□□□ -1.2
SMC4-217ENST00000485867 MGEA5O60502 916 aa7.58□□□□□ -1.2
SMC4-217ENST00000485867 KINO60870 393 aaKnown RBP7.58□□□□□ -1.2
SMC4-217ENST00000485867 CLASP2O75122 1294 aaKnown RBP7.58□□□□□ -1.2
SMC4-217ENST00000485867 ARHGAP8P85298 464 aa7.58□□□□□ -1.2
SMC4-217ENST00000485867 LMNB2Q03252 620 aa7.58□□□□□ -1.2
SMC4-217ENST00000485867 NEDD9Q14511 834 aa7.58□□□□□ -1.2
SMC4-217ENST00000485867 ATAT1Q5SQI0 421 aa7.58□□□□□ -1.2
SMC4-217ENST00000485867 FAM102BQ5T8I3 360 aa7.58□□□□□ -1.2
SMC4-217ENST00000485867 PCNX4Q63HM2 1172 aa7.58□□□□□ -1.2
SMC4-217ENST00000485867 XRRA1Q6P2D8 792 aa7.58□□□□□ -1.2
SMC4-217ENST00000485867 C1orf210Q8IVY1 113 aa7.58□□□□□ -1.2
SMC4-217ENST00000485867 PANK1Q8TE04 598 aa7.58□□□□□ -1.2
SMC4-217ENST00000485867 ACSF2Q96CM8 615 aaPredicted RBP7.58□□□□□ -1.2
SMC4-217ENST00000485867 ZBTB10Q96DT7 871 aa7.58□□□□□ -1.2
SMC4-217ENST00000485867 TTC14Q96N46 770 aa7.58□□□□□ -1.2
SMC4-217ENST00000485867 LRRCC1Q9C099 1032 aa7.58□□□□□ -1.2
SMC4-217ENST00000485867 FAM49AQ9H0Q0 323 aaPredicted RBP7.58□□□□□ -1.2
SMC4-217ENST00000485867 C12orf49Q9H741 205 aa7.58□□□□□ -1.2
SMC4-217ENST00000485867 TBC1D17Q9HA65 648 aa7.58□□□□□ -1.2
SMC4-217ENST00000485867 KCNK12Q9HB15 430 aa7.58□□□□□ -1.2
SMC4-217ENST00000485867 WNT16Q9UBV4 365 aa7.58□□□□□ -1.2
SMC4-217ENST00000485867 PCDHB7Q9Y5E2 793 aa7.58□□□□□ -1.2
SMC4-217ENST00000485867 TRPV2Q9Y5S1 764 aa7.58□□□□□ -1.2
SMC4-217ENST00000485867 IGF2RP11717 2491 aa7.58□□□□□ -1.2
SMC4-217ENST00000485867 MYH15Q9Y2K3 1946 aa7.58□□□□□ -1.2
SMC4-217ENST00000485867 RPLP2P05387 115 aaKnown RBP7.57□□□□□ -1.2
SMC4-217ENST00000485867 DCNP07585 359 aaKnown RBP7.57□□□□□ -1.2
SMC4-217ENST00000485867 HOXA13P31271 388 aaPredicted RBP7.57□□□□□ -1.2
SMC4-217ENST00000485867 PBX3P40426 434 aa7.57□□□□□ -1.2
SMC4-217ENST00000485867 SP4Q02446 784 aa7.57□□□□□ -1.2
SMC4-217ENST00000485867 SMC1AQ14683 1233 aaKnown RBP7.57□□□□□ -1.2
SMC4-217ENST00000485867 TMEM266Q2M3C6 531 aa7.57□□□□□ -1.2
SMC4-217ENST00000485867 GNPTABQ3T906 1256 aa7.57□□□□□ -1.2
SMC4-217ENST00000485867 SPECC1Q5M775 1068 aa7.57□□□□□ -1.2
SMC4-217ENST00000485867 ZNF648Q5T619 568 aaPredicted RBP7.57□□□□□ -1.2
SMC4-217ENST00000485867 VPS53Q5VIR6 699 aa7.57□□□□□ -1.2
SMC4-217ENST00000485867 KCNT2Q6UVM3 1135 aa7.57□□□□□ -1.2
SMC4-217ENST00000485867 CCDC149Q6ZUS6 474 aa7.57□□□□□ -1.2
SMC4-217ENST00000485867 ARMCX6Q7L4S7 300 aa7.57□□□□□ -1.2
SMC4-217ENST00000485867 OTOP3Q7RTS5 596 aa7.57□□□□□ -1.2
SMC4-217ENST00000485867 MAML2Q8IZL2 1156 aaPredicted RBP7.57□□□□□ -1.2
SMC4-217ENST00000485867 MRPL43Q8N983 215 aaKnown RBP7.57□□□□□ -1.2
SMC4-217ENST00000485867 KCT2Q8NC54 265 aa7.57□□□□□ -1.2
SMC4-217ENST00000485867 ASB11Q8WXH4 323 aa7.57□□□□□ -1.2
SMC4-217ENST00000485867 INPP4AQ96PE3 977 aaPredicted RBP7.57□□□□□ -1.2
SMC4-217ENST00000485867 JMJD4Q9H9V9 463 aa7.57□□□□□ -1.2
SMC4-217ENST00000485867 MAP3K20Q9NYL2 800 aaKnown RBP7.57□□□□□ -1.2
SMC4-217ENST00000485867 FAM8A1Q9UBU6 413 aa7.57□□□□□ -1.2
SMC4-217ENST00000485867 CA14Q9ULX7 337 aa7.57□□□□□ -1.2
SMC4-217ENST00000485867 FRMPD4Q14CM0 1322 aa7.56□□□□□ -1.2
SMC4-217ENST00000485867 KDM3AQ9Y4C1 1321 aa7.56□□□□□ -1.2
SMC4-217ENST00000485867 DOCK6Q96HP0 2047 aa7.56□□□□□ -1.2
SMC4-217ENST00000485867 C9IYK1 514 aa7.56□□□□□ -1.2
SMC4-217ENST00000485867 M0QZ92 97 aa7.56□□□□□ -1.2
SMC4-217ENST00000485867 FIBPO43427 364 aa7.56□□□□□ -1.2
SMC4-217ENST00000485867 DHX16O60231 1041 aaKnown RBP7.56□□□□□ -1.2
SMC4-217ENST00000485867 PPP1R11O60927 126 aaPredicted RBP7.56□□□□□ -1.2
SMC4-217ENST00000485867 FGFR1P11362 822 aa7.56□□□□□ -1.2
SMC4-217ENST00000485867 GLULP15104 373 aa7.56□□□□□ -1.2
SMC4-217ENST00000485867 EPCAMP16422 314 aa7.56□□□□□ -1.2
SMC4-217ENST00000485867 TGM1P22735 817 aa7.56□□□□□ -1.2
SMC4-217ENST00000485867 MARK3P27448 753 aa7.56□□□□□ -1.2
SMC4-217ENST00000485867 PPM1AP35813 382 aa7.56□□□□□ -1.2
SMC4-217ENST00000485867 TCF7P36402 384 aaPredicted RBP7.56□□□□□ -1.2
SMC4-217ENST00000485867 IGBP1P78318 339 aa7.56□□□□□ -1.2
SMC4-217ENST00000485867 MRPS9P82933 396 aaKnown RBP7.56□□□□□ -1.2
SMC4-217ENST00000485867 DMWDQ09019 674 aa7.56□□□□□ -1.2
SMC4-217ENST00000485867 TMEM62Q0P6H9 643 aa7.56□□□□□ -1.2
SMC4-217ENST00000485867 INPP5AQ14642 412 aa7.56□□□□□ -1.2
SMC4-217ENST00000485867 ALX1Q15699 326 aa7.56□□□□□ -1.2
SMC4-217ENST00000485867 ASPRV1Q53RT3 343 aa7.56□□□□□ -1.2
SMC4-217ENST00000485867 TMC5Q6UXY8 1006 aa7.56□□□□□ -1.2
SMC4-217ENST00000485867 SAMD3Q8N6K7 520 aa7.56□□□□□ -1.2
SMC4-217ENST00000485867 GPATCH3Q96I76 525 aa7.56□□□□□ -1.2
SMC4-217ENST00000485867 ZNF558Q96NG5 402 aa7.56□□□□□ -1.2
SMC4-217ENST00000485867 AMNQ9BXJ7 453 aa7.56□□□□□ -1.2
SMC4-217ENST00000485867 CELF4Q9BZC1 486 aaKnown RBP7.56□□□□□ -1.2
SMC4-217ENST00000485867 PRDM7Q9NQW5 492 aa7.56□□□□□ -1.2
SMC4-217ENST00000485867 C1orf112Q9NSG2 853 aa7.56□□□□□ -1.2
SMC4-217ENST00000485867 IGSF9Q9P2J2 1179 aa7.56□□□□□ -1.2
SMC4-217ENST00000485867 SMG5Q9UPR3 1016 aaKnown RBP7.56□□□□□ -1.2
SMC4-217ENST00000485867 PCDHA1Q9Y5I3 950 aa7.56□□□□□ -1.2
SMC4-217ENST00000485867 STAM2O75886 525 aa7.55□□□□□ -1.2
SMC4-217ENST00000485867 LRIG2O94898 1065 aa7.55□□□□□ -1.2
SMC4-217ENST00000485867 USP17L7P0C7H9 530 aa7.55□□□□□ -1.2
SMC4-217ENST00000485867 KRT17Q04695 432 aa7.55□□□□□ -1.2
SMC4-217ENST00000485867 ZNF528Q3MIS6 628 aa7.55□□□□□ -1.2
SMC4-217ENST00000485867 LRFN4Q6PJG9 635 aa7.55□□□□□ -1.2
SMC4-217ENST00000485867 LRRC55Q6ZSA7 311 aa7.55□□□□□ -1.2
SMC4-217ENST00000485867 SLC24A5Q71RS6 500 aa7.55□□□□□ -1.2
SMC4-217ENST00000485867 GPR149Q86SP6 731 aa7.55□□□□□ -1.2
SMC4-217ENST00000485867 SLC39A11Q8N1S5 342 aa7.55□□□□□ -1.2
SMC4-217ENST00000485867 SLC22A17Q8WUG5 538 aa7.55□□□□□ -1.2
SMC4-217ENST00000485867 TMEM40Q8WWA1 233 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms