RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 AVENQ9NQS1 362 aaPredicted RBP18.69■□□□□ 0.58
SMC4-216ENST00000485645 GDE1Q9NZC3 331 aa18.69■□□□□ 0.58
SMC4-216ENST00000485645 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.69■□□□□ 0.58
SMC4-216ENST00000485645 RIF1Q5UIP0 2472 aaKnown RBP18.68■□□□□ 0.58
SMC4-216ENST00000485645 TTC26A0AVF1 554 aa18.68■□□□□ 0.58
SMC4-216ENST00000485645 HNRNPDLO14979 420 aaKnown RBP18.68■□□□□ 0.58
SMC4-216ENST00000485645 KRT18P05783 430 aaKnown RBP18.68■□□□□ 0.58
SMC4-216ENST00000485645 DCNP07585 359 aaKnown RBP18.68■□□□□ 0.58
SMC4-216ENST00000485645 STARD6P59095 220 aa18.68■□□□□ 0.58
SMC4-216ENST00000485645 PPP2R3AQ06190 1150 aa18.68■□□□□ 0.58
SMC4-216ENST00000485645 SPAG1Q07617 926 aa18.68■□□□□ 0.58
SMC4-216ENST00000485645 SPECC1Q5M775 1068 aa18.68■□□□□ 0.58
SMC4-216ENST00000485645 LRRC15Q8TF66 581 aa18.68■□□□□ 0.58
SMC4-216ENST00000485645 MCRS1Q96EZ8 462 aa18.68■□□□□ 0.58
SMC4-216ENST00000485645 KXD1Q9BQD3 176 aa18.68■□□□□ 0.58
SMC4-216ENST00000485645 PARVGQ9HBI0 331 aa18.68■□□□□ 0.58
SMC4-216ENST00000485645 BLOC1S4Q9NUP1 217 aa18.68■□□□□ 0.58
SMC4-216ENST00000485645 TBX20Q9UMR3 447 aa18.68■□□□□ 0.58
SMC4-216ENST00000485645 UBQLN1Q9UMX0 589 aaKnown RBP18.68■□□□□ 0.58
SMC4-216ENST00000485645 PCDHB8Q9UN66 801 aa18.68■□□□□ 0.58
SMC4-216ENST00000485645 K7ENM7 598 aa18.67■□□□□ 0.58
SMC4-216ENST00000485645 TRAK2O60296 914 aa18.67■□□□□ 0.58
SMC4-216ENST00000485645 SEC24AO95486 1093 aa18.67■□□□□ 0.58
SMC4-216ENST00000485645 PLCG1P19174 1290 aa18.67■□□□□ 0.58
SMC4-216ENST00000485645 CYP3A5P20815 502 aa18.67■□□□□ 0.58
SMC4-216ENST00000485645 LRPAP1P30533 357 aa18.67■□□□□ 0.58
SMC4-216ENST00000485645 TNFSF9P41273 254 aa18.67■□□□□ 0.58
SMC4-216ENST00000485645 ZNF131P52739 623 aa18.67■□□□□ 0.58
SMC4-216ENST00000485645 PFKPQ01813 784 aa18.67■□□□□ 0.58
SMC4-216ENST00000485645 SNW1Q13573 536 aaKnown RBP18.67■□□□□ 0.58
SMC4-216ENST00000485645 MCM6Q14566 821 aa18.67■□□□□ 0.58
SMC4-216ENST00000485645 KARSQ15046 597 aaKnown RBP18.67■□□□□ 0.58
SMC4-216ENST00000485645 SF3A1Q15459 793 aaKnown RBP18.67■□□□□ 0.58
SMC4-216ENST00000485645 SLC5A9Q2M3M2 681 aa18.67■□□□□ 0.58
SMC4-216ENST00000485645 PJA1Q8NG27 643 aa18.67■□□□□ 0.58
SMC4-216ENST00000485645 RAD54LQ92698 747 aa18.67■□□□□ 0.58
SMC4-216ENST00000485645 CORO1BQ9BR76 489 aa18.67■□□□□ 0.58
SMC4-216ENST00000485645 ZHX3Q9H4I2 956 aa18.67■□□□□ 0.58
SMC4-216ENST00000485645 AFF4Q9UHB7 1163 aaKnown RBP18.67■□□□□ 0.58
SMC4-216ENST00000485645 MAFFQ9ULX9 164 aa18.67■□□□□ 0.58
SMC4-216ENST00000485645 INSL5Q9Y5Q6 135 aa18.67■□□□□ 0.58
SMC4-216ENST00000485645 FAM186AA6NE01 2351 aa18.66■□□□□ 0.58
SMC4-216ENST00000485645 LACTBL1A8MY62 500 aa18.66■□□□□ 0.58
SMC4-216ENST00000485645 ZNF197O14709 1029 aa18.66■□□□□ 0.58
SMC4-216ENST00000485645 OGTO15294 1046 aa18.66■□□□□ 0.58
SMC4-216ENST00000485645 XPOTO43592 962 aaKnown RBP18.66■□□□□ 0.58
SMC4-216ENST00000485645 PIGRP01833 764 aa18.66■□□□□ 0.58
SMC4-216ENST00000485645 CPB1P15086 417 aa18.66■□□□□ 0.58
SMC4-216ENST00000485645 PRKCQQ04759 706 aa18.66■□□□□ 0.58
SMC4-216ENST00000485645 GRIN1Q05586 938 aa18.66■□□□□ 0.58
SMC4-216ENST00000485645 ADCY1Q08828 1119 aa18.66■□□□□ 0.58
SMC4-216ENST00000485645 MLF2Q15773 248 aaPredicted RBP18.66■□□□□ 0.58
SMC4-216ENST00000485645 ZBTB6Q15916 424 aa18.66■□□□□ 0.58
SMC4-216ENST00000485645 SLC44A4Q53GD3 710 aa18.66■□□□□ 0.58
SMC4-216ENST00000485645 ELMOD1Q8N336 334 aa18.66■□□□□ 0.58
SMC4-216ENST00000485645 TSPAN18Q96SJ8 248 aa18.66■□□□□ 0.58
SMC4-216ENST00000485645 FOXQ1Q9C009 403 aa18.66■□□□□ 0.58
SMC4-216ENST00000485645 RPF1Q9H9Y2 349 aaKnown RBP18.66■□□□□ 0.58
SMC4-216ENST00000485645 DLGAP2Q9P1A6 1054 aa18.66■□□□□ 0.58
SMC4-216ENST00000485645 VPS13AQ96RL7 3174 aa18.66■□□□□ 0.58
SMC4-216ENST00000485645 CFAP54Q96N23 3096 aa18.65■□□□□ 0.58
SMC4-216ENST00000485645 KANSL1LA0AUZ9 987 aa18.65■□□□□ 0.58
SMC4-216ENST00000485645 M0QZQ0 153 aa18.65■□□□□ 0.58
SMC4-216ENST00000485645 TBCAO75347 108 aaKnown RBP18.65■□□□□ 0.58
SMC4-216ENST00000485645 ECI2O75521 394 aa18.65■□□□□ 0.58
SMC4-216ENST00000485645 CEBPBP17676 345 aa18.65■□□□□ 0.58
SMC4-216ENST00000485645 ABCD1P33897 745 aa18.65■□□□□ 0.58
SMC4-216ENST00000485645 YWHAHQ04917 246 aaPredicted RBP18.65■□□□□ 0.58
SMC4-216ENST00000485645 ENOX2Q16206 610 aaKnown RBP18.65■□□□□ 0.58
SMC4-216ENST00000485645 CYP4A22Q5TCH4 519 aa18.65■□□□□ 0.58
SMC4-216ENST00000485645 IQCEQ6IPM2 695 aa18.65■□□□□ 0.58
SMC4-216ENST00000485645 PDZD4Q76G19 769 aaPredicted RBP18.65■□□□□ 0.58
SMC4-216ENST00000485645 TMEM130Q8N3G9 435 aa18.65■□□□□ 0.58
SMC4-216ENST00000485645 LARP4BQ92615 738 aaKnown RBP18.65■□□□□ 0.58
SMC4-216ENST00000485645 ZNF512Q96ME7 567 aaPredicted RBP18.65■□□□□ 0.58
SMC4-216ENST00000485645 OXCT2Q9BYC2 517 aaPredicted RBP18.65■□□□□ 0.58
SMC4-216ENST00000485645 VPS37CA5D8V6 355 aaPredicted RBP18.64■□□□□ 0.57
SMC4-216ENST00000485645 FAM189A1O60320 539 aa18.64■□□□□ 0.57
SMC4-216ENST00000485645 MICAL2O94851 1124 aa18.64■□□□□ 0.57
SMC4-216ENST00000485645 DDIT3P35638 169 aa18.64■□□□□ 0.57
SMC4-216ENST00000485645 PRSS36Q5K4E3 855 aa18.64■□□□□ 0.57
SMC4-216ENST00000485645 ZBTB41Q5SVQ8 909 aa18.64■□□□□ 0.57
SMC4-216ENST00000485645 DSTYKQ6XUX3 929 aa18.64■□□□□ 0.57
SMC4-216ENST00000485645 RNF19BQ6ZMZ0 732 aa18.64■□□□□ 0.57
SMC4-216ENST00000485645 USP37Q86T82 979 aa18.64■□□□□ 0.57
SMC4-216ENST00000485645 C1orf210Q8IVY1 113 aa18.64■□□□□ 0.57
SMC4-216ENST00000485645 CD302Q8IX05 232 aa18.64■□□□□ 0.57
SMC4-216ENST00000485645 TCEAL4Q96EI5 215 aa18.64■□□□□ 0.57
SMC4-216ENST00000485645 FAM212AQ96EL1 285 aa18.64■□□□□ 0.57
SMC4-216ENST00000485645 MSTO1Q9BUK6 570 aa18.64■□□□□ 0.57
SMC4-216ENST00000485645 DDX23Q9BUQ8 820 aaKnown RBP18.64■□□□□ 0.57
SMC4-216ENST00000485645 CCSER1Q9C0I3 900 aa18.64■□□□□ 0.57
SMC4-216ENST00000485645 TIMM13Q9Y5L4 95 aaPredicted RBP18.64■□□□□ 0.57
SMC4-216ENST00000485645 A0A0B4J269 797 aa18.63■□□□□ 0.57
SMC4-216ENST00000485645 OAZ2O95190 189 aa18.63■□□□□ 0.57
SMC4-216ENST00000485645 ADRB2P07550 413 aa18.63■□□□□ 0.57
SMC4-216ENST00000485645 GLULP15104 373 aa18.63■□□□□ 0.57
SMC4-216ENST00000485645 PDCP20941 246 aa18.63■□□□□ 0.57
SMC4-216ENST00000485645 NMT1P30419 496 aaKnown RBP18.63■□□□□ 0.57
SMC4-216ENST00000485645 AARSP49588 968 aaKnown RBP eCLIP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms