RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 AMPD3Q01432 767 aa14.01□□□□□ -0.17
HDAC1-209ENST00000484305 ALCAMQ13740 583 aa14.01□□□□□ -0.17
HDAC1-209ENST00000484305 POSTNQ15063 836 aa14.01□□□□□ -0.17
HDAC1-209ENST00000484305 SPATA1Q5VX52 437 aa14.01□□□□□ -0.17
HDAC1-209ENST00000484305 CNNM4Q6P4Q7 775 aa14.01□□□□□ -0.17
HDAC1-209ENST00000484305 CYP26C1Q6V0L0 522 aa14.01□□□□□ -0.17
HDAC1-209ENST00000484305 CCDC149Q6ZUS6 474 aa14.01□□□□□ -0.17
HDAC1-209ENST00000484305 SYCP3Q8IZU3 236 aa14.01□□□□□ -0.17
HDAC1-209ENST00000484305 TDRD5Q8NAT2 981 aaKnown RBP14.01□□□□□ -0.17
HDAC1-209ENST00000484305 LEO1Q8WVC0 666 aaPredicted RBP14.01□□□□□ -0.17
HDAC1-209ENST00000484305 EDAQ92838 391 aa14.01□□□□□ -0.17
HDAC1-209ENST00000484305 TSPAN18Q96SJ8 248 aa14.01□□□□□ -0.17
HDAC1-209ENST00000484305 C7orf25Q9BPX7 421 aa14.01□□□□□ -0.17
HDAC1-209ENST00000484305 RHOBTB2Q9BYZ6 727 aa14.01□□□□□ -0.17
HDAC1-209ENST00000484305 PRKD2Q9BZL6 878 aa14.01□□□□□ -0.17
HDAC1-209ENST00000484305 WDR6Q9NNW5 1121 aaKnown RBP14.01□□□□□ -0.17
HDAC1-209ENST00000484305 ZDHHC7Q9NXF8 308 aa14.01□□□□□ -0.17
HDAC1-209ENST00000484305 LIMD1Q9UGP4 676 aa14.01□□□□□ -0.17
HDAC1-209ENST00000484305 RAPGEFL1Q9UHV5 662 aa14.01□□□□□ -0.17
HDAC1-209ENST00000484305 KCNH3Q9ULD8 1083 aa14.01□□□□□ -0.17
HDAC1-209ENST00000484305 DOCK8Q8NF50 2099 aa14.01□□□□□ -0.17
HDAC1-209ENST00000484305 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14□□□□□ -0.17
HDAC1-209ENST00000484305 PRR33A8MZF0 331 aa14□□□□□ -0.17
HDAC1-209ENST00000484305 XPOTO43592 962 aaKnown RBP14□□□□□ -0.17
HDAC1-209ENST00000484305 TBC1D4O60343 1298 aa14□□□□□ -0.17
HDAC1-209ENST00000484305 N4BP1O75113 896 aaKnown RBP14□□□□□ -0.17
HDAC1-209ENST00000484305 MRPL58Q14197 206 aaKnown RBP14□□□□□ -0.17
HDAC1-209ENST00000484305 TMEM132DQ14C87 1099 aa14□□□□□ -0.17
HDAC1-209ENST00000484305 PTPN21Q16825 1174 aa14□□□□□ -0.17
HDAC1-209ENST00000484305 SLC8B1Q6J4K2 584 aa14□□□□□ -0.17
HDAC1-209ENST00000484305 ZDHHC14Q8IZN3 488 aa14□□□□□ -0.17
HDAC1-209ENST00000484305 BEST2Q8NFU1 509 aa14□□□□□ -0.17
HDAC1-209ENST00000484305 SAAL1Q96ER3 474 aa14□□□□□ -0.17
HDAC1-209ENST00000484305 SPATA32Q96LK8 384 aa14□□□□□ -0.17
HDAC1-209ENST00000484305 BLZF1Q9H2G9 400 aa14□□□□□ -0.17
HDAC1-209ENST00000484305 ASB7Q9H672 318 aa14□□□□□ -0.17
HDAC1-209ENST00000484305 MAGEF1Q9HAY2 307 aa14□□□□□ -0.17
HDAC1-209ENST00000484305 PIDD1Q9HB75 910 aa14□□□□□ -0.17
HDAC1-209ENST00000484305 DERAQ9Y315 318 aa14□□□□□ -0.17
HDAC1-209ENST00000484305 GTF3C5Q9Y5Q8 519 aaPredicted RBP14□□□□□ -0.17
HDAC1-209ENST00000484305 CLUHO75153 1309 aa13.99□□□□□ -0.17
HDAC1-209ENST00000484305 NOTCH4Q99466 2003 aa13.99□□□□□ -0.17
HDAC1-209ENST00000484305 WDR27A2RRH5 827 aa13.99□□□□□ -0.17
HDAC1-209ENST00000484305 H7C4K7 107 aa13.99□□□□□ -0.17
HDAC1-209ENST00000484305 M0QZQ0 153 aa13.99□□□□□ -0.17
HDAC1-209ENST00000484305 ASGR2P07307 311 aa13.99□□□□□ -0.17
HDAC1-209ENST00000484305 C8AP07357 584 aa13.99□□□□□ -0.17
HDAC1-209ENST00000484305 GARTP22102 1010 aa13.99□□□□□ -0.17
HDAC1-209ENST00000484305 HOXD13P35453 343 aa13.99□□□□□ -0.17
HDAC1-209ENST00000484305 AFMP43652 599 aa13.99□□□□□ -0.17
HDAC1-209ENST00000484305 AARSP49588 968 aaKnown RBP eCLIP13.99□□□□□ -0.17
HDAC1-209ENST00000484305 WNT7BP56706 349 aa13.99□□□□□ -0.17
HDAC1-209ENST00000484305 KRT85P78386 507 aa13.99□□□□□ -0.17
HDAC1-209ENST00000484305 POU5F1Q01860 360 aaKnown RBP13.99□□□□□ -0.17
HDAC1-209ENST00000484305 ROR1Q01973 937 aa13.99□□□□□ -0.17
HDAC1-209ENST00000484305 CTXN3Q4LDR2 81 aa13.99□□□□□ -0.17
HDAC1-209ENST00000484305 PPM1LQ5SGD2 360 aa13.99□□□□□ -0.17
HDAC1-209ENST00000484305 LIN9Q5TKA1 542 aa13.99□□□□□ -0.17
HDAC1-209ENST00000484305 TRIM67Q6ZTA4 783 aa13.99□□□□□ -0.17
HDAC1-209ENST00000484305 OTOP3Q7RTS5 596 aa13.99□□□□□ -0.17
HDAC1-209ENST00000484305 GRAMD1CQ8IYS0 662 aa13.99□□□□□ -0.17
HDAC1-209ENST00000484305 PLCD3Q8N3E9 789 aa13.99□□□□□ -0.17
HDAC1-209ENST00000484305 SLC7A14Q8TBB6 771 aa13.99□□□□□ -0.17
HDAC1-209ENST00000484305 ACSF2Q96CM8 615 aaPredicted RBP13.99□□□□□ -0.17
HDAC1-209ENST00000484305 CBWD1Q9BRT8 395 aa13.99□□□□□ -0.17
HDAC1-209ENST00000484305 FAM213AQ9BRX8 229 aa13.99□□□□□ -0.17
HDAC1-209ENST00000484305 PCIF1Q9H4Z3 704 aa13.99□□□□□ -0.17
HDAC1-209ENST00000484305 TMEM206Q9H813 350 aa13.99□□□□□ -0.17
HDAC1-209ENST00000484305 SERTAD1Q9UHV2 236 aa13.99□□□□□ -0.17
HDAC1-209ENST00000484305 FBXL5Q9UKA1 691 aa13.99□□□□□ -0.17
HDAC1-209ENST00000484305 PCDHB8Q9UN66 801 aa13.99□□□□□ -0.17
HDAC1-209ENST00000484305 TIMM13Q9Y5L4 95 aaPredicted RBP13.99□□□□□ -0.17
HDAC1-209ENST00000484305 A0A1B0GVL5 298 aa13.98□□□□□ -0.17
HDAC1-209ENST00000484305 ANO9A1A5B4 782 aa13.98□□□□□ -0.17
HDAC1-209ENST00000484305 GOLGA8IPA6NC78 632 aa13.98□□□□□ -0.17
HDAC1-209ENST00000484305 GOLGA8JA6NMD2 632 aa13.98□□□□□ -0.17
HDAC1-209ENST00000484305 PIRO00625 290 aa13.98□□□□□ -0.17
HDAC1-209ENST00000484305 SPTLC1O15269 473 aa13.98□□□□□ -0.17
HDAC1-209ENST00000484305 CCL16O15467 120 aa13.98□□□□□ -0.17
HDAC1-209ENST00000484305 ACTN4O43707 911 aaKnown RBP13.98□□□□□ -0.17
HDAC1-209ENST00000484305 ABLIM3O94929 683 aa13.98□□□□□ -0.17
HDAC1-209ENST00000484305 HNRNPA1P09651 372 aaKnown RBP eCLIP13.98□□□□□ -0.17
HDAC1-209ENST00000484305 CMA1P23946 247 aa13.98□□□□□ -0.17
HDAC1-209ENST00000484305 ARPP19P56211 112 aa13.98□□□□□ -0.17
HDAC1-209ENST00000484305 LILRA4P59901 499 aa13.98□□□□□ -0.17
HDAC1-209ENST00000484305 EHHADHQ08426 723 aa13.98□□□□□ -0.17
HDAC1-209ENST00000484305 CUL4BQ13620 913 aa13.98□□□□□ -0.17
HDAC1-209ENST00000484305 UVSSAQ2YD98 709 aa13.98□□□□□ -0.17
HDAC1-209ENST00000484305 FAM26FQ5R3K3 315 aa13.98□□□□□ -0.17
HDAC1-209ENST00000484305 C9orf57Q5W0N0 161 aa13.98□□□□□ -0.17
HDAC1-209ENST00000484305 HFE2Q6ZVN8 426 aa13.98□□□□□ -0.17
HDAC1-209ENST00000484305 STXBP4Q6ZWJ1 553 aa13.98□□□□□ -0.17
HDAC1-209ENST00000484305 EPM2AIP1Q7L775 607 aaPredicted RBP13.98□□□□□ -0.17
HDAC1-209ENST00000484305 EFCAB13Q8IY85 973 aa13.98□□□□□ -0.17
HDAC1-209ENST00000484305 APPL2Q8NEU8 664 aa13.98□□□□□ -0.17
HDAC1-209ENST00000484305 ZNF461Q8TAF7 563 aa13.98□□□□□ -0.17
HDAC1-209ENST00000484305 SMOC2Q9H3U7 446 aa13.98□□□□□ -0.17
HDAC1-209ENST00000484305 SORCS3Q9UPU3 1222 aa13.98□□□□□ -0.17
HDAC1-209ENST00000484305 C2CD2Q9Y426 696 aa13.98□□□□□ -0.17
HDAC1-209ENST00000484305 TSC2P49815 1807 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms