RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 DERAQ9Y315 318 aa15.06■□□□□ 0
CLK3-204ENST00000483723 PCDHB4Q9Y5E5 795 aa15.06■□□□□ 0
CLK3-204ENST00000483723 TMCO5BA8MYB1 307 aa15.05■□□□□ -0
CLK3-204ENST00000483723 NPTXRO95502 500 aa15.05■□□□□ -0
CLK3-204ENST00000483723 STAU1O95793 577 aaKnown RBP15.05■□□□□ -0
CLK3-204ENST00000483723 UNGP13051 313 aaPredicted RBP15.05■□□□□ -0
CLK3-204ENST00000483723 TCP1P17987 556 aaKnown RBP15.05■□□□□ -0
CLK3-204ENST00000483723 ATICP31939 592 aa15.05■□□□□ -0
CLK3-204ENST00000483723 NAP1L1P55209 391 aaKnown RBP15.05■□□□□ -0
CLK3-204ENST00000483723 ZBTB6Q15916 424 aa15.05■□□□□ -0
CLK3-204ENST00000483723 TAF3Q5VWG9 929 aa15.05■□□□□ -0
CLK3-204ENST00000483723 ACAD10Q6JQN1 1059 aa15.05■□□□□ -0
CLK3-204ENST00000483723 GDF6Q6KF10 455 aaPredicted RBP15.05■□□□□ -0
CLK3-204ENST00000483723 ALKAL1Q6UXT8 129 aa15.05■□□□□ -0
CLK3-204ENST00000483723 CTNNBL1Q8WYA6 563 aaPredicted RBP15.05■□□□□ -0
CLK3-204ENST00000483723 CCDC94Q9BW85 323 aaPredicted RBP15.05■□□□□ -0
CLK3-204ENST00000483723 ABCB6Q9NP58 842 aa15.05■□□□□ -0
CLK3-204ENST00000483723 SEPT11Q9NVA2 429 aaKnown RBP15.05■□□□□ -0
CLK3-204ENST00000483723 GINS2Q9Y248 185 aa15.05■□□□□ -0
CLK3-204ENST00000483723 GRIN2DO15399 1336 aa15.04■□□□□ -0
CLK3-204ENST00000483723 CYP1A1P04798 512 aaPredicted RBP15.04■□□□□ -0
CLK3-204ENST00000483723 RPLP2P05387 115 aaKnown RBP15.04■□□□□ -0
CLK3-204ENST00000483723 ASGR1P07306 291 aa15.04■□□□□ -0
CLK3-204ENST00000483723 NOP2P46087 812 aaKnown RBP15.04■□□□□ -0
CLK3-204ENST00000483723 TUBB4BP68371 445 aa15.04■□□□□ -0
CLK3-204ENST00000483723 GPC5P78333 572 aa15.04■□□□□ -0
CLK3-204ENST00000483723 TMEM132DQ14C87 1099 aa15.04■□□□□ -0
CLK3-204ENST00000483723 KCNA10Q16322 511 aa15.04■□□□□ -0
CLK3-204ENST00000483723 CLEC16AQ2KHT3 1053 aa15.04■□□□□ -0
CLK3-204ENST00000483723 ERCC6LQ2NKX8 1250 aa15.04■□□□□ -0
CLK3-204ENST00000483723 SERINC5Q86VE9 423 aa15.04■□□□□ -0
CLK3-204ENST00000483723 RBBP8NLQ8NC74 664 aaPredicted RBP15.04■□□□□ -0
CLK3-204ENST00000483723 SLC35G2Q8TBE7 412 aa15.04■□□□□ -0
CLK3-204ENST00000483723 ARHGEF26Q96DR7 871 aa15.04■□□□□ -0
CLK3-204ENST00000483723 EIF2AQ9BY44 585 aaKnown RBP15.04■□□□□ -0
CLK3-204ENST00000483723 BCO2Q9BYV7 579 aa15.04■□□□□ -0
CLK3-204ENST00000483723 THAP2Q9H0W7 228 aa15.04■□□□□ -0
CLK3-204ENST00000483723 STXBP5LQ9Y2K9 1186 aa15.04■□□□□ -0
CLK3-204ENST00000483723 HYOU1Q9Y4L1 999 aa15.04■□□□□ -0
CLK3-204ENST00000483723 TRIP11Q15643 1979 aa15.04■□□□□ -0
CLK3-204ENST00000483723 THSD7BQ9C0I4 1608 aa15.04■□□□□ -0
CLK3-204ENST00000483723 SRGAP2O75044 1071 aa15.03■□□□□ -0
CLK3-204ENST00000483723 MTA2O94776 668 aa15.03■□□□□ -0
CLK3-204ENST00000483723 TFRCP02786 760 aaKnown RBP15.03■□□□□ -0
CLK3-204ENST00000483723 ASPAP45381 313 aa15.03■□□□□ -0
CLK3-204ENST00000483723 MRPS6P82932 125 aaKnown RBP15.03■□□□□ -0
CLK3-204ENST00000483723 ZNF699Q32M78 642 aa15.03■□□□□ -0
CLK3-204ENST00000483723 UBXN11Q5T124 520 aa15.03■□□□□ -0
CLK3-204ENST00000483723 TMEM270Q6UE05 265 aa15.03■□□□□ -0
CLK3-204ENST00000483723 CREG2Q8IUH2 290 aa15.03■□□□□ -0
CLK3-204ENST00000483723 RHOT2Q8IXI1 618 aa15.03■□□□□ -0
CLK3-204ENST00000483723 PCSK9Q8NBP7 692 aaKnown RBP15.03■□□□□ -0
CLK3-204ENST00000483723 UBXN4Q92575 508 aa15.03■□□□□ -0
CLK3-204ENST00000483723 TSPAN18Q96SJ8 248 aa15.03■□□□□ -0
CLK3-204ENST00000483723 OSBPL9Q96SU4 736 aa15.03■□□□□ -0
CLK3-204ENST00000483723 SNTG2Q9NY99 539 aa15.03■□□□□ -0
CLK3-204ENST00000483723 DDX20Q9UHI6 824 aaKnown RBP15.03■□□□□ -0
CLK3-204ENST00000483723 PDCD11Q14690 1871 aaKnown RBP15.03■□□□□ -0
CLK3-204ENST00000483723 XKR4Q5GH76 650 aa15.03■□□□□ -0
CLK3-204ENST00000483723 TRIM72Q6ZMU5 477 aa15.03■□□□□ -0
CLK3-204ENST00000483723 ZNF572Q7Z3I7 529 aaPredicted RBP15.03■□□□□ -0
CLK3-204ENST00000483723 SNX27Q96L92 541 aa15.03■□□□□ -0
CLK3-204ENST00000483723 CISHQ9NSE2 258 aa15.03■□□□□ -0
CLK3-204ENST00000483723 ITGA11Q9UKX5 1188 aa15.03■□□□□ -0
CLK3-204ENST00000483723 TRPV2Q9Y5S1 764 aa15.03■□□□□ -0
CLK3-204ENST00000483723 NCK2O43639 380 aa15.02□□□□□ -0.01
CLK3-204ENST00000483723 CALCAP01258 141 aa15.02□□□□□ -0.01
CLK3-204ENST00000483723 ITGB3P05106 788 aa15.02□□□□□ -0.01
CLK3-204ENST00000483723 CYP1A2P05177 515 aa15.02□□□□□ -0.01
CLK3-204ENST00000483723 ABCB4P21439 1286 aa15.02□□□□□ -0.01
CLK3-204ENST00000483723 PRMT2P55345 433 aa15.02□□□□□ -0.01
CLK3-204ENST00000483723 YWHAEP62258 255 aaKnown RBP15.02□□□□□ -0.01
CLK3-204ENST00000483723 RBP5P82980 135 aa15.02□□□□□ -0.01
CLK3-204ENST00000483723 MGAT3Q09327 533 aa15.02□□□□□ -0.01
CLK3-204ENST00000483723 ZNF667Q5HYK9 610 aa15.02□□□□□ -0.01
CLK3-204ENST00000483723 RSPH3Q86UC2 560 aa15.02□□□□□ -0.01
CLK3-204ENST00000483723 SYCE1Q8N0S2 351 aa15.02□□□□□ -0.01
CLK3-204ENST00000483723 UBE2Q2Q8WVN8 375 aa15.02□□□□□ -0.01
CLK3-204ENST00000483723 ZNF606Q8WXB4 792 aa15.02□□□□□ -0.01
CLK3-204ENST00000483723 RABGGTAQ92696 567 aa15.02□□□□□ -0.01
CLK3-204ENST00000483723 WNT8BQ93098 351 aa15.02□□□□□ -0.01
CLK3-204ENST00000483723 FAM124BQ9H5Z6 455 aaPredicted RBP15.02□□□□□ -0.01
CLK3-204ENST00000483723 OSGEPQ9NPF4 335 aa15.02□□□□□ -0.01
CLK3-204ENST00000483723 DPP3Q9NY33 737 aa15.02□□□□□ -0.01
CLK3-204ENST00000483723 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.02□□□□□ -0.01
CLK3-204ENST00000483723 PUF60Q9UHX1 559 aaKnown RBP15.02□□□□□ -0.01
CLK3-204ENST00000483723 NOC2LQ9Y3T9 749 aaKnown RBP15.02□□□□□ -0.01
CLK3-204ENST00000483723 CDY2AQ9Y6F7 541 aa15.02□□□□□ -0.01
CLK3-204ENST00000483723 V9GYY5 206 aaPredicted RBP15.02□□□□□ -0.01
CLK3-204ENST00000483723 CTAGE15A4D2H0 777 aa15.01□□□□□ -0.01
CLK3-204ENST00000483723 PDE2AO00408 941 aaPredicted RBP15.01□□□□□ -0.01
CLK3-204ENST00000483723 CES2O00748 559 aa15.01□□□□□ -0.01
CLK3-204ENST00000483723 ZNF185O15231 689 aa15.01□□□□□ -0.01
CLK3-204ENST00000483723 CABYRO75952 493 aa15.01□□□□□ -0.01
CLK3-204ENST00000483723 FTCDO95954 541 aa15.01□□□□□ -0.01
CLK3-204ENST00000483723 CTAGE8P0CG41 777 aa15.01□□□□□ -0.01
CLK3-204ENST00000483723 GNA15P30679 374 aa15.01□□□□□ -0.01
CLK3-204ENST00000483723 PTPN11Q06124 597 aaPredicted RBP15.01□□□□□ -0.01
CLK3-204ENST00000483723 CKAP4Q07065 602 aaKnown RBP15.01□□□□□ -0.01
CLK3-204ENST00000483723 CTAGE6Q86UF2 777 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms