RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 PFKFB1P16118 471 aa17.97■□□□□ 0.47
VAMP4-204ENST00000482519 PPM1LQ5SGD2 360 aa17.97■□□□□ 0.47
VAMP4-204ENST00000482519 RSPO2Q6UXX9 243 aaPredicted RBP17.97■□□□□ 0.47
VAMP4-204ENST00000482519 CCDC149Q6ZUS6 474 aa17.97■□□□□ 0.47
VAMP4-204ENST00000482519 TDRD5Q8NAT2 981 aaKnown RBP17.97■□□□□ 0.47
VAMP4-204ENST00000482519 CMASQ8NFW8 434 aaPredicted RBP17.97■□□□□ 0.47
VAMP4-204ENST00000482519 SUSD3Q96L08 255 aa17.97■□□□□ 0.47
VAMP4-204ENST00000482519 TSPAN18Q96SJ8 248 aa17.97■□□□□ 0.47
VAMP4-204ENST00000482519 PYM1Q9BRP8 204 aaKnown RBP17.97■□□□□ 0.47
VAMP4-204ENST00000482519 BACE2Q9Y5Z0 518 aa17.97■□□□□ 0.47
VAMP4-204ENST00000482519 TCHHQ07283 1943 aa17.96■□□□□ 0.47
VAMP4-204ENST00000482519 H7C4K7 107 aa17.96■□□□□ 0.47
VAMP4-204ENST00000482519 SYN3O14994 580 aa17.96■□□□□ 0.47
VAMP4-204ENST00000482519 ZMYND10O75800 440 aa17.96■□□□□ 0.47
VAMP4-204ENST00000482519 C1RP00736 705 aa17.96■□□□□ 0.47
VAMP4-204ENST00000482519 C8AP07357 584 aa17.96■□□□□ 0.47
VAMP4-204ENST00000482519 ADRB2P07550 413 aa17.96■□□□□ 0.47
VAMP4-204ENST00000482519 CMA1P23946 247 aa17.96■□□□□ 0.47
VAMP4-204ENST00000482519 LRPAP1P30533 357 aa17.96■□□□□ 0.47
VAMP4-204ENST00000482519 CUL4BQ13620 913 aa17.96■□□□□ 0.47
VAMP4-204ENST00000482519 RAB33AQ14088 237 aa17.96■□□□□ 0.47
VAMP4-204ENST00000482519 CTXN3Q4LDR2 81 aa17.96■□□□□ 0.47
VAMP4-204ENST00000482519 FAM26FQ5R3K3 315 aa17.96■□□□□ 0.47
VAMP4-204ENST00000482519 SPATA1Q5VX52 437 aa17.96■□□□□ 0.47
VAMP4-204ENST00000482519 CRELD2Q6UXH1 353 aaPredicted RBP17.96■□□□□ 0.47
VAMP4-204ENST00000482519 DSTYKQ6XUX3 929 aa17.96■□□□□ 0.47
VAMP4-204ENST00000482519 ZSWIM2Q8NEG5 633 aa17.96■□□□□ 0.47
VAMP4-204ENST00000482519 APPL2Q8NEU8 664 aa17.96■□□□□ 0.47
VAMP4-204ENST00000482519 ZNF707Q96C28 371 aaPredicted RBP17.96■□□□□ 0.47
VAMP4-204ENST00000482519 CBWD1Q9BRT8 395 aa17.96■□□□□ 0.47
VAMP4-204ENST00000482519 ASB7Q9H672 318 aa17.96■□□□□ 0.47
VAMP4-204ENST00000482519 FBXW11Q9UKB1 542 aa17.96■□□□□ 0.47
VAMP4-204ENST00000482519 POLIQ9UNA4 740 aa17.96■□□□□ 0.47
VAMP4-204ENST00000482519 TIMM13Q9Y5L4 95 aaPredicted RBP17.96■□□□□ 0.47
VAMP4-204ENST00000482519 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.96■□□□□ 0.47
VAMP4-204ENST00000482519 ANK1P16157 1881 aa17.96■□□□□ 0.47
VAMP4-204ENST00000482519 PPEF2O14830 753 aa17.95■□□□□ 0.46
VAMP4-204ENST00000482519 SLFN14P0C7P3 912 aa17.95■□□□□ 0.46
VAMP4-204ENST00000482519 GARTP22102 1010 aa17.95■□□□□ 0.46
VAMP4-204ENST00000482519 MAPK8IP2Q13387 824 aaPredicted RBP17.95■□□□□ 0.46
VAMP4-204ENST00000482519 ARMCX5Q6P1M9 558 aa17.95■□□□□ 0.46
VAMP4-204ENST00000482519 UNC13DQ70J99 1090 aa17.95■□□□□ 0.46
VAMP4-204ENST00000482519 OTOP3Q7RTS5 596 aa17.95■□□□□ 0.46
VAMP4-204ENST00000482519 SLC7A14Q8TBB6 771 aa17.95■□□□□ 0.46
VAMP4-204ENST00000482519 ACSF2Q96CM8 615 aaPredicted RBP17.95■□□□□ 0.46
VAMP4-204ENST00000482519 LRFN3Q9BTN0 628 aa17.95■□□□□ 0.46
VAMP4-204ENST00000482519 PRKD2Q9BZL6 878 aa17.95■□□□□ 0.46
VAMP4-204ENST00000482519 SCAND2PQ9GZW5 306 aaPredicted RBP17.95■□□□□ 0.46
VAMP4-204ENST00000482519 GDPD2Q9HCC8 539 aa17.95■□□□□ 0.46
VAMP4-204ENST00000482519 C11orf16Q9NQ32 467 aa17.95■□□□□ 0.46
VAMP4-204ENST00000482519 ZDHHC7Q9NXF8 308 aa17.95■□□□□ 0.46
VAMP4-204ENST00000482519 LIMD1Q9UGP4 676 aa17.95■□□□□ 0.46
VAMP4-204ENST00000482519 PCDHB8Q9UN66 801 aa17.95■□□□□ 0.46
VAMP4-204ENST00000482519 DERAQ9Y315 318 aa17.95■□□□□ 0.46
VAMP4-204ENST00000482519 CCL16O15467 120 aa17.94■□□□□ 0.46
VAMP4-204ENST00000482519 GPR37L1O60883 481 aa17.94■□□□□ 0.46
VAMP4-204ENST00000482519 IL18RAPO95256 599 aa17.94■□□□□ 0.46
VAMP4-204ENST00000482519 LDHAP00338 332 aaKnown RBP17.94■□□□□ 0.46
VAMP4-204ENST00000482519 C9orf57Q5W0N0 161 aa17.94■□□□□ 0.46
VAMP4-204ENST00000482519 CNNM4Q6P4Q7 775 aa17.94■□□□□ 0.46
VAMP4-204ENST00000482519 CYP26C1Q6V0L0 522 aa17.94■□□□□ 0.46
VAMP4-204ENST00000482519 USP37Q86T82 979 aa17.94■□□□□ 0.46
VAMP4-204ENST00000482519 NELFCDQ8IXH7 590 aa17.94■□□□□ 0.46
VAMP4-204ENST00000482519 PAGE5Q96GU1 130 aa17.94■□□□□ 0.46
VAMP4-204ENST00000482519 WDR6Q9NNW5 1121 aaKnown RBP17.94■□□□□ 0.46
VAMP4-204ENST00000482519 SLC39A2Q9NP94 309 aa17.94■□□□□ 0.46
VAMP4-204ENST00000482519 DPP3Q9NY33 737 aa17.94■□□□□ 0.46
VAMP4-204ENST00000482519 RBAKQ9NYW8 714 aaPredicted RBP17.94■□□□□ 0.46
VAMP4-204ENST00000482519 FBXL5Q9UKA1 691 aa17.94■□□□□ 0.46
VAMP4-204ENST00000482519 USTQ9Y2C2 406 aa17.94■□□□□ 0.46
VAMP4-204ENST00000482519 C2CD2Q9Y426 696 aa17.94■□□□□ 0.46
VAMP4-204ENST00000482519 ACTN4O43707 911 aaKnown RBP17.93■□□□□ 0.46
VAMP4-204ENST00000482519 EXTL3O43909 919 aa17.93■□□□□ 0.46
VAMP4-204ENST00000482519 ASGR2P07307 311 aa17.93■□□□□ 0.46
VAMP4-204ENST00000482519 GBP2P32456 591 aaPredicted RBP17.93■□□□□ 0.46
VAMP4-204ENST00000482519 ELF1P32519 619 aa17.93■□□□□ 0.46
VAMP4-204ENST00000482519 HOXD13P35453 343 aa17.93■□□□□ 0.46
VAMP4-204ENST00000482519 LILRA4P59901 499 aa17.93■□□□□ 0.46
VAMP4-204ENST00000482519 TFAMQ00059 246 aaKnown RBP17.93■□□□□ 0.46
VAMP4-204ENST00000482519 ROR1Q01973 937 aa17.93■□□□□ 0.46
VAMP4-204ENST00000482519 PTPN21Q16825 1174 aa17.93■□□□□ 0.46
VAMP4-204ENST00000482519 SLC8B1Q6J4K2 584 aa17.93■□□□□ 0.46
VAMP4-204ENST00000482519 ZNF280DQ6N043 979 aa17.93■□□□□ 0.46
VAMP4-204ENST00000482519 PLCD3Q8N3E9 789 aa17.93■□□□□ 0.46
VAMP4-204ENST00000482519 ZNF461Q8TAF7 563 aa17.93■□□□□ 0.46
VAMP4-204ENST00000482519 EDAQ92838 391 aa17.93■□□□□ 0.46
VAMP4-204ENST00000482519 TRIOO75962 3097 aa17.93■□□□□ 0.46
VAMP4-204ENST00000482519 CLUHO75153 1309 aa17.93■□□□□ 0.46
VAMP4-204ENST00000482519 DENND4AQ7Z401 1863 aa17.92■□□□□ 0.46
VAMP4-204ENST00000482519 MYO10Q9HD67 2058 aa17.92■□□□□ 0.46
VAMP4-204ENST00000482519 PVALEFA0A1B0GWK0 134 aa17.92■□□□□ 0.46
VAMP4-204ENST00000482519 M0QZQ0 153 aa17.92■□□□□ 0.46
VAMP4-204ENST00000482519 PRRG1O14668 218 aa17.92■□□□□ 0.46
VAMP4-204ENST00000482519 EIF3DO15371 548 aaKnown RBP eCLIP17.92■□□□□ 0.46
VAMP4-204ENST00000482519 XYLBO75191 536 aa17.92■□□□□ 0.46
VAMP4-204ENST00000482519 HNRNPA1P09651 372 aaKnown RBP eCLIP17.92■□□□□ 0.46
VAMP4-204ENST00000482519 SYKP43405 635 aa17.92■□□□□ 0.46
VAMP4-204ENST00000482519 NDUFA8P51970 172 aa17.92■□□□□ 0.46
VAMP4-204ENST00000482519 WNT7BP56706 349 aa17.92■□□□□ 0.46
VAMP4-204ENST00000482519 ZXDAP98168 799 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms